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Protein

30S ribosomal protein S12, chloroplastic

Gene

rps12-A

more
Organism
Lactuca sativa (Garden lettuce)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits (By similarity).By similarity

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S12, chloroplastic
Gene namesi
Name:rps12-A
AND
Name:rps12-B
Encoded oniPlastid; Chloroplast
OrganismiLactuca sativa (Garden lettuce)
Taxonomic identifieri4236 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridscampanulidsAsteralesAsteraceaeCichorioideaeCichorieaeLactucinaeLactuca

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Chloroplast, Plastid

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002766161 – 11830S ribosomal protein S12, chloroplasticAdd BLAST118

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit.By similarity

Structurei

3D structure databases

ProteinModelPortaliQ332V3
SMRiQ332V3
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

KOiK02950

Family and domain databases

CDDicd03368 Ribosomal_S12, 1 hit
HAMAPiMF_00403_B Ribosomal_S12_B, 1 hit
InterProiView protein in InterPro
IPR012340 NA-bd_OB-fold
IPR006032 Ribosomal_S12/S23
IPR005679 Ribosomal_S12_bac
PANTHERiPTHR11652 PTHR11652, 1 hit
PfamiView protein in Pfam
PF00164 Ribosom_S12_S23, 1 hit
PIRSFiPIRSF002133 Ribosomal_S12/S23, 1 hit
PRINTSiPR01034 RIBOSOMALS12
SUPFAMiSSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR00981 rpsL_bact, 1 hit
PROSITEiView protein in PROSITE
PS00055 RIBOSOMAL_S12, 1 hit

Sequencei

Sequence statusi: Complete.

Q332V3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MPTIKQLIRN TRQPIRNVTK SPALRGCPQR RGTCTRVYTI TPKKPNSALR
60 70 80 90 100
KVARVRLTSG FEITAYIPGI GHNSQEHSVV LVRGGRVKDL PGVRYHIVRG
110
TLDAVGVKDR QQGRSSAL
Length:118
Mass (Da):13,080
Last modified:December 6, 2005 - v1
Checksum:iBFC9C1604452508F
GO

Sequence cautioni

The sequence ABD47293 differs from that shown. Reason: Erroneous gene model prediction.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP007232 Genomic DNA Translation: BAE47618.1
AP007232 Genomic DNA Translation: BAE47619.1
DQ383816 Genomic DNA Translation: ABD47212.1
DQ383816 Genomic DNA Translation: ABD47293.1 Sequence problems.
RefSeqiYP_398307.1, NC_007578.1
YP_398308.1, NC_007578.1

Genome annotation databases

GeneIDi3772815
3772827
KEGGilsv:3772815
lsv:3772827

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP007232 Genomic DNA Translation: BAE47618.1
AP007232 Genomic DNA Translation: BAE47619.1
DQ383816 Genomic DNA Translation: ABD47212.1
DQ383816 Genomic DNA Translation: ABD47293.1 Sequence problems.
RefSeqiYP_398307.1, NC_007578.1
YP_398308.1, NC_007578.1

3D structure databases

ProteinModelPortaliQ332V3
SMRiQ332V3
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi3772815
3772827
KEGGilsv:3772815
lsv:3772827

Phylogenomic databases

KOiK02950

Family and domain databases

CDDicd03368 Ribosomal_S12, 1 hit
HAMAPiMF_00403_B Ribosomal_S12_B, 1 hit
InterProiView protein in InterPro
IPR012340 NA-bd_OB-fold
IPR006032 Ribosomal_S12/S23
IPR005679 Ribosomal_S12_bac
PANTHERiPTHR11652 PTHR11652, 1 hit
PfamiView protein in Pfam
PF00164 Ribosom_S12_S23, 1 hit
PIRSFiPIRSF002133 Ribosomal_S12/S23, 1 hit
PRINTSiPR01034 RIBOSOMALS12
SUPFAMiSSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR00981 rpsL_bact, 1 hit
PROSITEiView protein in PROSITE
PS00055 RIBOSOMAL_S12, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiRR12_LACSA
AccessioniPrimary (citable) accession number: Q332V3
Secondary accession number(s): Q1KXJ9
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 6, 2007
Last sequence update: December 6, 2005
Last modified: October 10, 2018
This is version 62 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
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