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Protein

Protein Ycf2

Gene

ycf2-A

more
Organism
Lactuca sativa (Garden lettuce)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Probable ATPase of unknown function. Its presence in a non-photosynthetic plant (Epifagus virginiana) and experiments in tobacco indicate that it has an essential function which is probably not related to photosynthesis.

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi1611 – 1618ATPUniRule annotation8

GO - Molecular functioni

Keywordsi

LigandATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Protein Ycf2UniRule annotation
Gene namesi
Name:ycf2-AUniRule annotation
AND
Name:ycf2-BUniRule annotation
Encoded oniPlastid; Chloroplast
OrganismiLactuca sativa (Garden lettuce)
Taxonomic identifieri4236 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridscampanulidsAsteralesAsteraceaeCichorioideaeCichorieaeLactucinaeLactuca

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Chloroplast, Plastid

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002425331 – 2264Protein Ycf2Add BLAST2264

Proteomic databases

PRIDEiQ332R7

Family & Domainsi

Sequence similaritiesi

Belongs to the Ycf2 family.UniRule annotation

Family and domain databases

HAMAPiMF_01330 Ycf2, 1 hit
InterProiView protein in InterPro
IPR003593 AAA+_ATPase
IPR003959 ATPase_AAA_core
IPR027417 P-loop_NTPase
IPR008543 Uncharacterised_Ycf2
PANTHERiPTHR33078 PTHR33078, 1 hit
PfamiView protein in Pfam
PF00004 AAA, 1 hit
PF05695 DUF825, 1 hit
SMARTiView protein in SMART
SM00382 AAA, 1 hit
SUPFAMiSSF52540 SSF52540, 2 hits

Sequencei

Sequence statusi: Complete.

Q332R7-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MTGHEFKSWI LELREILREI KNSHYFLDSW TQFNSVGSFI HIFFHQERFI
60 70 80 90 100
KLFDSRIWSI LLSHNSQGST SNRYFTIKGV ILFGVAVLIY RINNRNMVER
110 120 130 140 150
KNLYLIGLLP IPMNSIGPRN DTLEESVGSS NINRLIVSLL YLPKGKKIYE
160 170 180 190 200
SSFLNPKEST WVLPITKKCS MPESNWGSRW WRDWIGKKRD SSCKISNETV
210 220 230 240 250
AGIEILFKEK DLKYLEFFFV YYRDDPIRKD HDWELFDRLS LRKRQNRINL
260 270 280 290 300
NSGPLFEILV KHWICYLMSA FREKIPIEVE GFFKQQGAGS TIKSNDIEHV
310 320 330 340 350
SHLFSRNKSA ISLQNCAQFH MWQFRQDLFV SWGKNPPESD LLRNVSRENL
360 370 380 390 400
IWLDNVWLVN KDRFFRKVRN VSSNIQYDST RSSFVQVRDS SQLKGSSDQS
410 420 430 440 450
RDHFDSISNE DSEYHTLINQ REIQQLKERS ILWDPSFLQT EGTEIESNRF
460 470 480 490 500
PKCLSGYSSM SRLFTEREKQ MINHLLPEEI EEFLGNPTRS VRSFFSDRWS
510 520 530 540 550
EFHLGSNPTE RSTRDQKLLK KQQDLSFLRR SENKEMVNLF KIITYLQNTV
560 570 580 590 600
SIHPISSDSG CDMVPKDEPD MDSSNKISFL NKNPFFDLFH LFHDRNRGGY
610 620 630 640 650
TLHHDFESEE RFQELADLFT LSITEPDLVY HKRFAFSIDS YGLDPKQFLN
660 670 680 690 700
GVFNSRYEWK TTSLLVLLVL LPIFYEENES FYRRIRKKRV RISCGNDLEE
710 720 730 740 750
PKPKIVVFAS NNIMEAANQY RLIRNLIQIQ HSTHRYIRNV LNRFFLMNRS
760 770 780 790 800
DRNFKYGIQR DQIGKDTLNH RTLMKYMINQ HLSNLKKSQK RWFDPLIFFS
810 820 830 840 850
RTKRSMNRDP DAYRYKWSTG SKNFQEHFVS EQKSRFQVVF DRLRINQYSI
860 870 880 890 900
DWSEVIDKKD LSKPLRFFLS KLLLFLSNSL PFLFVSFGNI PIHRSEIYIY
910 920 930 940 950
ELKGPNDPQF LESIGLQIVH LKKLKPFLLD DHETCQKSKF LINGGTISPF
960 970 980 990 1000
LFNKIPKWMI DSFHTRNNRR KSFDNTDSYF SMIFHDQYNW LNPVKSFHRS
1010 1020 1030 1040 1050
SLRSSFYKAN QLRFLNNPHH FCFYCNKRFP FYVEKARINN YDFTYGQFLN
1060 1070 1080 1090 1100
ILFIRNKIFS LCVGKKKHAF WGRDTISAIE SQVSNIFIPK AFPQSGDETY
1110 1120 1130 1140 1150
NLYKSFHFPS RSNPFVRRAI YSIADISGTP LTEGQIVNFE RTYCQPLSDM
1160 1170 1180 1190 1200
NLSDSEGKNL YQYLNFNSNM GLIHTPCYEK YLPSEKRKKR SLCLKKCVEK
1210 1220 1230 1240 1250
GQMYRTFQRD SAYSTLSKWN LFQTYMPWFL TSTGYRYLKF LFLDTFSDLL
1260 1270 1280 1290 1300
PILSSSQKFV SIFHDIMHGS NISWRILQKK FCLPQRNLIS EISSKCLHNL
1310 1320 1330 1340 1350
LLSEEMIHRN NESPLISTHL TNVREFLYAI LFLLLVAAYL ACTRLLFVFG
1360 1370 1380 1390 1400
ASSELQTEFE KVKSLMIPSS MIELRKLLDR YPTSEPNSFW FLKQLGDSLG
1410 1420 1430 1440 1450
GNMLLGGGPA YRVKSIRSKK KYLNINLIDI IDLISIIPNP INRITFSRNT
1460 1470 1480 1490 1500
RHLSHTSKEI YSLIRKRKNV NGDWIDDKIE SWVANSDSID DEKREFLVQF
1510 1520 1530 1540 1550
STLTTEKRID QILLSLTHSD HFSKNDSGYQ MIEQPGAIYL RYLVDIHKKY
1560 1570 1580 1590 1600
LMNYEFNTSS LAERRIFLAH YQTITYSQTS CGANSLHFPS HGKPFSLRLA
1610 1620 1630 1640 1650
LSLSRGTLVI GSIGTGRSYL VKYLAKNSYL PFITVFLNKS LDNKSQGFDN
1660 1670 1680 1690 1700
IDVDASDDSD ASDDIDASDD ILDMELELLT SMNALTMDMM PEDEDLLYIT
1710 1720 1730 1740 1750
LQFELAKAMS PCIIWIPNIH DLDVNESNYL SPGLLVNLLS RDYETRNILV
1760 1770 1780 1790 1800
IASTHIPQKV DPALIAPNKL NTCIKIRRLL IPQQRKHFFT LSYTRGFHLE
1810 1820 1830 1840 1850
KKMFHTNGFG SITMGSNARD LVALTNEALS ISITQNKSII DTNTIRSALH
1860 1870 1880 1890 1900
RQIWDLRSQV RSVQDHGILF YKIGRAVAQN VLLSNCPIDP ISIYMKKKSC
1910 1920 1930 1940 1950
NEVDYYLYNW YFELGTSMKK LTILLYLLSC SAGSVTQDLW SLPGPDEKNG
1960 1970 1980 1990 2000
ITPYGLVEND SGLVRGLLEV EGALVGSSRT CSQFDKDRVT LLLRPEPRNP
2010 2020 2030 2040 2050
LDMMQNGSCS ILDQRFLYEK DESEFEEGDE RQQIEEDLFN HIVWAPRIWR
2060 2070 2080 2090 2100
PWGFLFDCIE RPNELGFPYW SRSFRGKRIV YDEEDELQEN DSEFLQNGTV
2110 2120 2130 2140 2150
QYQTRDISSK EQGLFRISQF IWDPADPLFF LFKAQPFVSV FSHRELFADE
2160 2170 2180 2190 2200
EMSKGLLTPQ KNRPTSLYKR WFIKKTQEKH FELLINRQRW LRTNRSLSNG
2210 2220 2230 2240 2250
SFRSNTLSES YQYLSNLFLS NGTLLDQMTK ALLRKRWLFP DEMQIGFMEQ
2260
DKDFPFLSQK DMWP
Length:2,264
Mass (Da):265,917
Last modified:December 6, 2005 - v1
Checksum:iD8A0AAD465A62E5C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP007232 Genomic DNA Translation: BAE47639.1
AP007232 Genomic DNA Translation: BAE47655.1
DQ383816 Genomic DNA Translation: ABD47276.1
DQ383816 Genomic DNA Translation: ABD47296.1
RefSeqiYP_398372.1, NC_007578.1
YP_398388.1, NC_007578.1

Genome annotation databases

GeneIDi3772783
3772784
KEGGilsv:3772783
lsv:3772784

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP007232 Genomic DNA Translation: BAE47639.1
AP007232 Genomic DNA Translation: BAE47655.1
DQ383816 Genomic DNA Translation: ABD47276.1
DQ383816 Genomic DNA Translation: ABD47296.1
RefSeqiYP_398372.1, NC_007578.1
YP_398388.1, NC_007578.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiQ332R7

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi3772783
3772784
KEGGilsv:3772783
lsv:3772784

Family and domain databases

HAMAPiMF_01330 Ycf2, 1 hit
InterProiView protein in InterPro
IPR003593 AAA+_ATPase
IPR003959 ATPase_AAA_core
IPR027417 P-loop_NTPase
IPR008543 Uncharacterised_Ycf2
PANTHERiPTHR33078 PTHR33078, 1 hit
PfamiView protein in Pfam
PF00004 AAA, 1 hit
PF05695 DUF825, 1 hit
SMARTiView protein in SMART
SM00382 AAA, 1 hit
SUPFAMiSSF52540 SSF52540, 2 hits
ProtoNetiSearch...

Entry informationi

Entry nameiYCF2_LACSA
AccessioniPrimary (citable) accession number: Q332R7
Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 27, 2006
Last sequence update: December 6, 2005
Last modified: June 20, 2018
This is version 42 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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