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Protein
Submitted name:

Tcfl5 protein

Gene

Tcfl5

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Tcfl5 proteinImported
Submitted name:
Transcription factor-like 5 (basic helix-loop-helix)Imported
Gene namesi
Name:Tcfl5Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 2

Organism-specific databases

MGIiMGI:2672878 Tcfl5

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSMUSG00000038932 Expressed in 144 organ(s), highest expression level in testis

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000040611

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini389 – 439BHLHInterPro annotationAdd BLAST51

Phylogenomic databases

eggNOGiENOG410IECS Eukaryota
ENOG410YEAA LUCA
GeneTreeiENSGT00390000002821
HOGENOMiHOG000231268
HOVERGENiHBG067309
OMAiDRFNSIQ
OrthoDBiEOG091G0G81
TreeFamiTF336112

Family and domain databases

Gene3Di4.10.280.10, 1 hit
InterProiView protein in InterPro
IPR011598 bHLH_dom
IPR036638 HLH_DNA-bd_sf
IPR039583 TCFL5
PANTHERiPTHR15402 PTHR15402, 1 hit
PfamiView protein in Pfam
PF00010 HLH, 1 hit
SMARTiView protein in SMART
SM00353 HLH, 1 hit
SUPFAMiSSF47459 SSF47459, 1 hit
PROSITEiView protein in PROSITE
PS50888 BHLH, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

Q32NY8-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSGPGPREPP PEAGATGGEA GPEGAGGGDA ALGEPGLSFT TTDLSLVEMT
60 70 80 90 100
EVEYTQLQHI LYSHMEAADG ELEARLGSAL LAGPGAGSGA AGSLAPAPPV
110 120 130 140 150
YPVLCPPLAA DAPCLGHVDF QELRMMLLGE AGAAEKTPGG ADGTRTRADG
160 170 180 190 200
VAKEGAGGAG PDGAPEARAK PTVRVRLEDR FNSMPAEPPA PRGAEPAESG
210 220 230 240 250
VALNNLVTLI RHPSELMNVP LHQQQNKCTT LVKNKTAAAT TALQFTYPLF
260 270 280 290 300
TSACSTGGNA SLAQTQSSSN SCSILEAAKH QDIGLPRAFS FCYQQEIEST
310 320 330 340 350
KQTGGSRNKA LPEQVWIKVG EALCKQAINK RNRSRIRQLD TSVERRALGE
360 370 380 390 400
IQNVGEGSST SQGTWQSSES SQSNLGEQTQ SGPQGGRSQR RERHNRMERD
410 420 430 440 450
RRRRIRICCD ELNLLVPFCN AETDKATTLQ WTTAFLKYIQ ERHGDSLKKE
460 470 480
FESVFCGKTG RRLKLTRPES LVTCPAQGSL QSSPAMEIK
Length:489
Mass (Da):51,957
Last modified:December 6, 2005 - v1
Checksum:iAC0E2A90DE9A76C5
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
E9Q5K1E9Q5K1_MOUSE
Transcription factor-like 5 (basic ...
Tcfl5
292Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL669926 Genomic DNA No translation available.
AL732560 Genomic DNA No translation available.
BC108399 mRNA Translation: AAI08400.1
RefSeqiNP_839985.2, NM_178254.3
UniGeneiMm.473700

Genome annotation databases

EnsembliENSMUST00000037877; ENSMUSP00000040611; ENSMUSG00000038932
GeneIDi277353
UCSCiuc008ojn.2 mouse

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL669926 Genomic DNA No translation available.
AL732560 Genomic DNA No translation available.
BC108399 mRNA Translation: AAI08400.1
RefSeqiNP_839985.2, NM_178254.3
UniGeneiMm.473700

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000040611

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000037877; ENSMUSP00000040611; ENSMUSG00000038932
GeneIDi277353
UCSCiuc008ojn.2 mouse

Organism-specific databases

CTDi10732
MGIiMGI:2672878 Tcfl5

Phylogenomic databases

eggNOGiENOG410IECS Eukaryota
ENOG410YEAA LUCA
GeneTreeiENSGT00390000002821
HOGENOMiHOG000231268
HOVERGENiHBG067309
OMAiDRFNSIQ
OrthoDBiEOG091G0G81
TreeFamiTF336112

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000038932 Expressed in 144 organ(s), highest expression level in testis

Family and domain databases

Gene3Di4.10.280.10, 1 hit
InterProiView protein in InterPro
IPR011598 bHLH_dom
IPR036638 HLH_DNA-bd_sf
IPR039583 TCFL5
PANTHERiPTHR15402 PTHR15402, 1 hit
PfamiView protein in Pfam
PF00010 HLH, 1 hit
SMARTiView protein in SMART
SM00353 HLH, 1 hit
SUPFAMiSSF47459 SSF47459, 1 hit
PROSITEiView protein in PROSITE
PS50888 BHLH, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiQ32NY8_MOUSE
AccessioniPrimary (citable) accession number: Q32NY8
Entry historyiIntegrated into UniProtKB/TrEMBL: December 6, 2005
Last sequence update: December 6, 2005
Last modified: November 7, 2018
This is version 91 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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