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Protein
Submitted name:

Potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3b

Gene

kcns3b

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionIon channel, Potassium channelSAAS annotation, Voltage-gated channelSAAS annotation
Biological processIon transport, Potassium transport, Transport
LigandPotassium

Names & Taxonomyi

Protein namesi
Submitted name:
Potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3bImported
Submitted name:
Zgc:123261Imported
Gene namesi
Name:kcns3bImported
ORF Names:zgc:123261Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 20

Organism-specific databases

ZFINiZDB-GENE-051120-78 kcns3b

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei183 – 204HelicalSequence analysisAdd BLAST22
Transmembranei216 – 238HelicalSequence analysisAdd BLAST23
Transmembranei250 – 267HelicalSequence analysisAdd BLAST18
Transmembranei323 – 343HelicalSequence analysisAdd BLAST21
Transmembranei355 – 372HelicalSequence analysisAdd BLAST18
Transmembranei384 – 408HelicalSequence analysisAdd BLAST25

Keywords - Cellular componenti

Membrane

Expressioni

Gene expression databases

BgeeiENSDARG00000029511

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000044936

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini15 – 124BTBInterPro annotationAdd BLAST110

Sequence similaritiesi

Belongs to the potassium channel family.SAAS annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

eggNOGiKOG3713 Eukaryota
COG1226 LUCA
GeneTreeiENSGT00760000118981
HOGENOMiHOG000231016
HOVERGENiHBG052230
OMAiVWFTVEY
OrthoDBiEOG091G0FP3
TreeFamiTF313103

Family and domain databases

Gene3Di1.20.120.350, 1 hit
InterProiView protein in InterPro
IPR000210 BTB/POZ_dom
IPR005821 Ion_trans_dom
IPR003968 K_chnl_volt-dep_Kv
IPR003971 K_chnl_volt-dep_Kv9
IPR011333 SKP1/BTB/POZ_sf
IPR003131 T1-type_BTB
IPR028325 VG_K_chnl
IPR027359 Volt_channel_dom_sf
PANTHERiPTHR11537 PTHR11537, 1 hit
PfamiView protein in Pfam
PF02214 BTB_2, 1 hit
PF00520 Ion_trans, 1 hit
PRINTSiPR00169 KCHANNEL
PR01494 KV9CHANNEL
PR01491 KVCHANNEL
SMARTiView protein in SMART
SM00225 BTB, 1 hit
SUPFAMiSSF54695 SSF54695, 1 hit

Sequencei

Sequence statusi: Complete.

Q32LW7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMYGQILHHQ GREEDLVNLN IGGIHHKVER CVLLRFPHTR VAQLIQCHSD
60 70 80 90 100
AAILELCDDY SPTEQEYYFD RSPQVFHCVL NFYRTGHFHT LEELCVFCFS
110 120 130 140 150
QEIEYWGLCE LDLDACCLEW FLERKDEHEL NSSGQSSKNA SSGEISVTSE
160 170 180 190 200
DLWKSEGMRC SDVRKLMWET LEDPQHSRCS RGVAAVSVLV ILISILAMCV
210 220 230 240 250
HSLPEFRYQT DGEHSVLDSV ELFCIVFFSV EFFLRVIAAP QPLRFLGNPL
260 270 280 290 300
NMIDVASILP FYITLAVERL DEEDKEENQS LVNMGRVVQV LRLMRSFRVL
310 320 330 340 350
KLARHSEGMR AFGETLMNCQ CEVGLLVLFI TVGISFFSTF IYYTEKEEAS
360 370 380 390 400
SQLSSIPICW WWGIISMTTV GYGDVYPLTV AGRIVATVCI LCGLLVISLP
410 420
ITIIMNNFSK YFEKNRKCLS EAKA
Length:424
Mass (Da):48,506
Last modified:December 6, 2005 - v1
Checksum:i4C03C5515C9AD54E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX276177 Genomic DNA No translation available.
BC109401 mRNA Translation: AAI09402.1
RefSeqiNP_001032460.1, NM_001037383.1
UniGeneiDr.91363

Genome annotation databases

EnsembliENSDART00000044937; ENSDARP00000044936; ENSDARG00000029511
GeneIDi558674
KEGGidre:558674

Entry informationi

Entry nameiQ32LW7_DANRE
AccessioniPrimary (citable) accession number: Q32LW7
Entry historyiIntegrated into UniProtKB/TrEMBL: December 6, 2005
Last sequence update: December 6, 2005
Last modified: March 28, 2018
This is version 106 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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