UniProtKB - Q2VEF5 (RK20_SOLTU)
Protein
50S ribosomal protein L20, chloroplastic
Gene
rpl20
Organism
Solanum tuberosum (Potato)
Status
Functioni
Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.UniRule annotation
GO - Molecular functioni
- rRNA binding Source: UniProtKB-UniRule
- structural constituent of ribosome Source: InterPro
GO - Biological processi
- ribosomal large subunit assembly Source: UniProtKB-UniRule
- translation Source: InterPro
Keywordsi
Molecular function | Ribonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding |
Names & Taxonomyi
Protein namesi | Recommended name: 50S ribosomal protein L20, chloroplasticUniRule annotation |
Gene namesi | Name:rpl20UniRule annotation |
Encoded oni | Plastid; Chloroplast |
Organismi | Solanum tuberosum (Potato) |
Taxonomic identifieri | 4113 [NCBI] |
Taxonomic lineagei | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliopsida › eudicotyledons › Gunneridae › Pentapetalae › asterids › lamiids › Solanales › Solanaceae › Solanoideae › Solaneae › Solanum |
Proteomesi |
|
Subcellular locationi
Chloroplast
Chloroplast
- chloroplast Source: UniProtKB-SubCell
Other locations
- ribosome Source: UniProtKB-KW
Keywords - Cellular componenti
Chloroplast, PlastidPTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000276428 | 1 – 128 | 50S ribosomal protein L20, chloroplasticAdd BLAST | 128 |
Family & Domainsi
Sequence similaritiesi
Belongs to the bacterial ribosomal protein bL20 family.UniRule annotation
Phylogenomic databases
InParanoidi | Q2VEF5 |
KOi | K02887 |
OrthoDBi | 1582185at2759 |
Family and domain databases
CDDi | cd07026 Ribosomal_L20, 1 hit |
Gene3Di | 1.10.1900.20, 1 hit |
HAMAPi | MF_00382 Ribosomal_L20, 1 hit |
InterProi | View protein in InterPro IPR005813 Ribosomal_L20 IPR035566 Ribosomal_protein_L20_C |
PANTHERi | PTHR10986 PTHR10986, 1 hit |
Pfami | View protein in Pfam PF00453 Ribosomal_L20, 1 hit |
PRINTSi | PR00062 RIBOSOMALL20 |
SUPFAMi | SSF74731 SSF74731, 1 hit |
TIGRFAMsi | TIGR01032 rplT_bact, 1 hit |
PROSITEi | View protein in PROSITE PS00937 RIBOSOMAL_L20, 1 hit |
i Sequence
Sequence statusi: Complete.
Q2VEF5-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MTRIKRGYIA RRRRTKIRLF ASSFRGAHSR LTRTITQQKI RALVSAHRDR
60 70 80 90 100
DRKKRDFRRL WITRINAVIR ERGVSYSYSR LIHDLYKRQL LLNRKILAQI
110 120
AISNRNCLYM ISNEIIKEVD WKESTRII
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | DQ231562 Genomic DNA Translation: ABB90063.1 DQ386163 Genomic DNA Translation: ABD47080.1 |
RefSeqi | YP_635662.1, NC_008096.2 |
Genome annotation databases
GeneIDi | 4099869 |
KEGGi | sot:4099869 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | DQ231562 Genomic DNA Translation: ABB90063.1 DQ386163 Genomic DNA Translation: ABD47080.1 |
RefSeqi | YP_635662.1, NC_008096.2 |
3D structure databases
SMRi | Q2VEF5 |
ModBasei | Search... |
Genome annotation databases
GeneIDi | 4099869 |
KEGGi | sot:4099869 |
Phylogenomic databases
InParanoidi | Q2VEF5 |
KOi | K02887 |
OrthoDBi | 1582185at2759 |
Family and domain databases
CDDi | cd07026 Ribosomal_L20, 1 hit |
Gene3Di | 1.10.1900.20, 1 hit |
HAMAPi | MF_00382 Ribosomal_L20, 1 hit |
InterProi | View protein in InterPro IPR005813 Ribosomal_L20 IPR035566 Ribosomal_protein_L20_C |
PANTHERi | PTHR10986 PTHR10986, 1 hit |
Pfami | View protein in Pfam PF00453 Ribosomal_L20, 1 hit |
PRINTSi | PR00062 RIBOSOMALL20 |
SUPFAMi | SSF74731 SSF74731, 1 hit |
TIGRFAMsi | TIGR01032 rplT_bact, 1 hit |
PROSITEi | View protein in PROSITE PS00937 RIBOSOMAL_L20, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | RK20_SOLTU | |
Accessioni | Q2VEF5Primary (citable) accession number: Q2VEF5 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | February 6, 2007 |
Last sequence update: | January 10, 2006 | |
Last modified: | July 31, 2019 | |
This is version 58 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Plant Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
Complete proteome, Reference proteomeDocuments
- Ribosomal proteins
Ribosomal proteins families and list of entries - SIMILARITY comments
Index of protein domains and families