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Protein

tRNA pseudouridine synthase A

Gene

truA

Organism
Salinibacter ruber (strain DSM 13855 / M31)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.UniRule annotation

Catalytic activityi

tRNA uridine(38-40) = tRNA pseudouridine(38-40).UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei52NucleophileUniRule annotation1
Binding sitei110SubstrateUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionIsomerase
Biological processtRNA processing

Enzyme and pathway databases

BioCyciSRUB309807:G1G5H-663-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
tRNA pseudouridine synthase AUniRule annotation (EC:5.4.99.12UniRule annotation)
Alternative name(s):
tRNA pseudouridine(38-40) synthaseUniRule annotation
tRNA pseudouridylate synthase IUniRule annotation
tRNA-uridine isomerase IUniRule annotation
Gene namesi
Name:truAUniRule annotation
Ordered Locus Names:SRU_0664
OrganismiSalinibacter ruber (strain DSM 13855 / M31)
Taxonomic identifieri309807 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesBacteroidetes Order II. Incertae sedisRhodothermaceaeSalinibacter
Proteomesi
  • UP000008674 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10000171631 – 265tRNA pseudouridine synthase AAdd BLAST265

Proteomic databases

PRIDEiQ2S4S9

Interactioni

Subunit structurei

Homodimer.UniRule annotation

Protein-protein interaction databases

STRINGi309807.SRU_0664

Structurei

3D structure databases

ProteinModelPortaliQ2S4S9
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the tRNA pseudouridine synthase TruA family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105DI7 Bacteria
COG0101 LUCA
HOGENOMiHOG000248674
KOiK06173
OMAiFLYGMVR
OrthoDBiPOG091H010Q

Family and domain databases

Gene3Di3.30.70.660, 1 hit
HAMAPiMF_00171 TruA, 1 hit
InterProiView protein in InterPro
IPR020103 PsdUridine_synth_cat_dom_sf
IPR001406 PsdUridine_synth_TruA
IPR020097 PsdUridine_synth_TruA_a/b_dom
IPR020095 PsdUridine_synth_TruA_C
PANTHERiPTHR11142 PTHR11142, 1 hit
PfamiView protein in Pfam
PF01416 PseudoU_synth_1, 2 hits
PIRSFiPIRSF001430 tRNA_psdUrid_synth, 1 hit
SUPFAMiSSF55120 SSF55120, 1 hit
TIGRFAMsiTIGR00071 hisT_truA, 1 hit

Sequencei

Sequence statusi: Complete.

Q2S4S9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPRYRLLVEY DGTDFHGWQI QPTVPTVQGA LEEAVDTVVG TACRVTGSGR
60 70 80 90 100
TDAGVHARGQ VAHVDLPETR DPYRLRGSLN GLTPDAVAVR RVERAPDDFH
110 120 130 140 150
ARYDARRRRY HYHLHTQPCA LGRRARTPVR PVPDFGRIRA ATPDLLGRHN
160 170 180 190 200
FSSFCLTQSE TENRVCTLTH LRWVDEARRG CWRVEVVGTR FLHGMVRALV
210 220 230 240 250
GTLVEIGHEK RAADALPAVL AARDRRAAGP SMPPEGLVLE AVRYEQPLFD
260
DGPGDPLVPA VRREA
Length:265
Mass (Da):29,570
Last modified:January 24, 2006 - v1
Checksum:i0865E20C59A818EA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000159 Genomic DNA Translation: ABC46120.1
RefSeqiWP_011403435.1, NC_007677.1
YP_444802.1, NC_007677.1

Genome annotation databases

EnsemblBacteriaiABC46120; ABC46120; SRU_0664
GeneIDi3853143
KEGGisru:SRU_0664
PATRICifig|309807.25.peg.681

Similar proteinsi

Entry informationi

Entry nameiTRUA_SALRD
AccessioniPrimary (citable) accession number: Q2S4S9
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: January 24, 2006
Last modified: July 18, 2018
This is version 85 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

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