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Protein
Submitted name:

Retrotransposon protein, putative, Ty1-copia subclass

Gene

LOC_Os12g12620

Organism
Oryza sativa subsp. japonica (Rice)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Retrotransposon protein, putative, Ty1-copia subclassImported
Gene namesi
Ordered Locus Names:LOC_Os12g12620Imported
OrganismiOryza sativa subsp. japonica (Rice)Imported
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryzaOryza sativa

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini222 – 237CCHC-typeInterPro annotationAdd BLAST16

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiENOG410IRNZ Eukaryota
ENOG410YB3X LUCA
HOGENOMiHOG000128581

Family and domain databases

InterProiView protein in InterPro
IPR001878 Znf_CCHC
IPR036875 Znf_CCHC_sf
SMARTiView protein in SMART
SM00343 ZnF_C2HC, 1 hit
SUPFAMiSSF57756 SSF57756, 1 hit
PROSITEiView protein in PROSITE
PS50158 ZF_CCHC, 1 hit

Sequencei

Sequence statusi: Complete.

Q2QVJ2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATTVVSKFE VVKFDGTGNF VLWQMRLKDL LAQQGISKAL EETMPEKMDA
60 70 80 90 100
GKWEEMKAQA AATIRLSLSD SVMYQVMDEK TSKEIWVKLT SLYMSKSLTS
110 120 130 140 150
KLYLKQQLYG LQMQEESDLR KHVDVFNQLV VDLSKLDVKL DDEDKAIILL
160 170 180 190 200
CSLPPSYEHV VTILTHGKDT IKTEIISSLL ARDLRRSKKN EAMEASQAES
210 220 230 240 250
LLVKAKHDHE AGVSKSKEKG ARCYKCHEFG HIRRNCPLLK KRKDGIASLA
260 270 280 290 300
ARGDDSDSSS HEILTVSNEK SGEAWMLDSA SSYHVTSKRE WFSSYKSGDF
310 320 330 340 350
GVVYLGDDTS YRVVGVGDVK FKMYDGNEVL LSDVRHVPGL RKSLISLGSL
360 370 380 390 400
HEIGWLYQVD SDRKTMNIMK DGKTVMTGER TSSCLYKLQG SAVAGGVMED
410 420
GHAGVAVHDL EGGEPGEGSS GGSA
Length:424
Mass (Da):46,950
Last modified:January 24, 2006 - v1
Checksum:iA4AD1A4E2229862C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DP000011 Genomic DNA Translation: ABA96825.1

Similar proteinsi

Entry informationi

Entry nameiQ2QVJ2_ORYSJ
AccessioniPrimary (citable) accession number: Q2QVJ2
Entry historyiIntegrated into UniProtKB/TrEMBL: January 24, 2006
Last sequence update: January 24, 2006
Last modified: February 28, 2018
This is version 44 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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