UniProtKB - Q2QNS6 (CSLD4_ORYSJ)
Protein
Cellulose synthase-like protein D4
Gene
CSLD4
Organism
Oryza sativa subsp. japonica (Rice)
Status
Functioni
Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall.
Sites
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Active sitei | 452 | Sequence analysis | 1 | |
Active sitei | 905 | Sequence analysis | 1 |
GO - Molecular functioni
- cellulose synthase (UDP-forming) activity Source: InterPro
- mannan synthase activity Source: GO_Central
GO - Biological processi
- cellulose biosynthetic process Source: InterPro
- cell wall organization Source: UniProtKB-KW
- plant-type cell wall organization or biogenesis Source: UniProtKB
- plant-type primary cell wall biogenesis Source: GO_Central
Keywordsi
Molecular function | Glycosyltransferase, Transferase |
Biological process | Cell wall biogenesis/degradation |
Enzyme and pathway databases
PlantReactomei | R-OSA-1119314 Cellulose biosynthesis R-OSA-9627657 Regulation of leaf development |
Protein family/group databases
CAZyi | GT2 Glycosyltransferase Family 2 |
Names & Taxonomyi
Protein namesi | |
Gene namesi | Name:CSLD4 Ordered Locus Names:Os12g0555600, LOC_Os12g36890 ORF Names:OsJ_035046 |
Organismi | Oryza sativa subsp. japonica (Rice) |
Taxonomic identifieri | 39947 [NCBI] |
Taxonomic lineagei | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliopsida › Liliopsida › Poales › Poaceae › BOP clade › Oryzoideae › Oryzeae › Oryzinae › Oryza › Oryza sativa |
Proteomesi |
|
Subcellular locationi
Golgi apparatus
- Golgi apparatus membrane Curated; Multi-pass membrane protein Curated
Golgi apparatus
- Golgi apparatus Source: UniProtKB
- Golgi membrane Source: UniProtKB-SubCell
- trans-Golgi network Source: GO_Central
Plasma Membrane
- plasma membrane Source: GO_Central
Other locations
- integral component of membrane Source: UniProtKB-KW
Topology
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Transmembranei | 321 – 341 | HelicalSequence analysisAdd BLAST | 21 | |
Transmembranei | 352 – 372 | HelicalSequence analysisAdd BLAST | 21 | |
Transmembranei | 988 – 1008 | HelicalSequence analysisAdd BLAST | 21 | |
Transmembranei | 1014 – 1034 | HelicalSequence analysisAdd BLAST | 21 | |
Transmembranei | 1060 – 1080 | HelicalSequence analysisAdd BLAST | 21 | |
Transmembranei | 1114 – 1134 | HelicalSequence analysisAdd BLAST | 21 | |
Transmembranei | 1147 – 1167 | HelicalSequence analysisAdd BLAST | 21 | |
Transmembranei | 1177 – 1197 | HelicalSequence analysisAdd BLAST | 21 |
Keywords - Cellular componenti
Golgi apparatus, MembranePTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000319395 | 1 – 1215 | Cellulose synthase-like protein D4Add BLAST | 1215 |
Proteomic databases
PaxDbi | Q2QNS6 |
PRIDEi | Q2QNS6 |
Family & Domainsi
Sequence similaritiesi
Keywords - Domaini
Transmembrane, Transmembrane helixPhylogenomic databases
eggNOGi | ENOG410IEH4 Eukaryota COG1215 LUCA |
HOGENOMi | HOG000241941 |
InParanoidi | Q2QNS6 |
KOi | K00770 |
OMAi | ATEHRGW |
OrthoDBi | 679241at2759 |
Family and domain databases
Gene3Di | 3.90.550.10, 1 hit |
InterProi | View protein in InterPro IPR005150 Cellulose_synth IPR029044 Nucleotide-diphossugar_trans |
Pfami | View protein in Pfam PF03552 Cellulose_synt, 1 hit |
SUPFAMi | SSF53448 SSF53448, 1 hit |
i Sequence
Sequence statusi: Complete.
Q2QNS6-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MSRRLSLPAG APVTVAVSPV RSPGGDAVVR RGSGLTSPVP RHSLGSSTAT
60 70 80 90 100
LQVSPVRRSG GSRYLGASRD GGADESAEFV HYTVHIPPTP DRATASVASE
110 120 130 140 150
AEAAAEAEEV HRPQRSYISG TIFTGGLNCA TRGHVLNFSG EGGATAASRA
160 170 180 190 200
AASGNMSCKM RGCDMPAFLN GGRPPCDCGF MICKECYAEC AAGNCPGCKE
210 220 230 240 250
AFSAGSDTDE SDSVTDDDDD EAVSSSEERD QLPLTSMARK FSVVHSMKVP
260 270 280 290 300
GAAANGNGKP AEFDHARWLF ETKGTYGYGN ALWPKDGHAH SGAGFVAADE
310 320 330 340 350
PPNFGARCRR PLTRKTSVSQ AILSPYRLLI AIRLVALGFF LAWRIRHPNP
360 370 380 390 400
EAVWLWAMSV ACEVWFAFSW LLDSLPKLCP VHRAADLAVL AERFESPTAR
410 420 430 440 450
NPKGRSDLPG IDVFVTSADP EKEPPLVTAN TILSILAADY PVEKLACYLS
460 470 480 490 500
DDGGALLSFE ALAETASFAR TWVPFCRKHG VEPRCPEAYF GQKRDFLKNK
510 520 530 540 550
VRVDFVRERR KVKREYDEFK VRVNSLPEAI RRRSDAYNAG EELRARRRQQ
560 570 580 590 600
EEAAAAAAAG NGELGAAAVE TAAVKATWMS DGSHWPGTWT CPAADHARGD
610 620 630 640 650
HAGIIQAMLA PPTSEPVMGG EAAECGGLID TTGVDVRLPM LVYVSREKRP
660 670 680 690 700
GYDHNKKAGA MNALVRTSAI MSNGPFILNL DCDHYVHNSS ALREGMCFML
710 720 730 740 750
DRGGDRVCFV QFPQRFEGVD PSDRYANHNL VFFDVSMRAM DGLQGPMYVG
760 770 780 790 800
TGCVFRRTAL YGFSPPRATE HHGWLGRRKI KLFLTKKKSM GKKTDRAEDD
810 820 830 840 850
TEMMLPPIED DDGGADIEAS AMLPKRFGGS ATFVASIPVA EYQGRLLQDT
860 870 880 890 900
PGCHHGRPAG ALAVPREPLD AATVAEAIGV ISCFYEEKTE WGRRIGWIYG
910 920 930 940 950
SVTEDVVTGY RMHNRGWRSV YCVTPRRDAF RGTAPINLTD RLHQVLRWAT
960 970 980 990 1000
GSVEIFFSRN NALFASPRMK LLQRVAYFNA GMYPFTSVFL LAYCLLPAVS
1010 1020 1030 1040 1050
LFSGKFIVQR LSATFLAFLL VITLTLCLLA LLEIKWSGIT LHEWWRNEQF
1060 1070 1080 1090 1100
WVIGGTSAHP AAVLQGLLKV IAGVDISFTL TSKPGNGGGD GGVGGEGNDD
1110 1120 1130 1140 1150
EAFAELYEVR WSYLMVPPVT IMMVNAVAIA VAAARTLYSE FPQWSKLLGG
1160 1170 1180 1190 1200
AFFSFWVLCH LYPFAKGLLG RRGRVPTIVF VWSGLISMII SLLWVYINPP
1210
AGARERIGGG GFSFP
Sequence cautioni
The sequence BAF30018 differs from that shown. Reason: Erroneous gene model prediction.Curated
The sequence EAZ20837 differs from that shown. Reason: Erroneous gene model prediction.Curated
Experimental Info
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Sequence conflicti | 777 – 780 | RRKI → DAWV in AAL38529 (PubMed:11842136).Curated | 4 |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | DP000011 Genomic DNA Translation: ABA99552.1 AP008218 Genomic DNA Translation: BAF30018.1 Sequence problems. AP014968 Genomic DNA Translation: BAT17602.1 CM000149 Genomic DNA Translation: EAZ20837.1 Sequence problems. AF435644 mRNA Translation: AAL38529.1 |
RefSeqi | XP_015620379.1, XM_015764893.1 |
Genome annotation databases
EnsemblPlantsi | Os12t0555600-01; Os12t0555600-01; Os12g0555600 |
GeneIDi | 107276048 |
Gramenei | Os12t0555600-01; Os12t0555600-01; Os12g0555600 |
KEGGi | osa:107276048 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | DP000011 Genomic DNA Translation: ABA99552.1 AP008218 Genomic DNA Translation: BAF30018.1 Sequence problems. AP014968 Genomic DNA Translation: BAT17602.1 CM000149 Genomic DNA Translation: EAZ20837.1 Sequence problems. AF435644 mRNA Translation: AAL38529.1 |
RefSeqi | XP_015620379.1, XM_015764893.1 |
3D structure databases
SMRi | Q2QNS6 |
ModBasei | Search... |
Protein-protein interaction databases
STRINGi | 4530.OS12T0555600-01 |
Protein family/group databases
CAZyi | GT2 Glycosyltransferase Family 2 |
Proteomic databases
PaxDbi | Q2QNS6 |
PRIDEi | Q2QNS6 |
Genome annotation databases
EnsemblPlantsi | Os12t0555600-01; Os12t0555600-01; Os12g0555600 |
GeneIDi | 107276048 |
Gramenei | Os12t0555600-01; Os12t0555600-01; Os12g0555600 |
KEGGi | osa:107276048 |
Phylogenomic databases
eggNOGi | ENOG410IEH4 Eukaryota COG1215 LUCA |
HOGENOMi | HOG000241941 |
InParanoidi | Q2QNS6 |
KOi | K00770 |
OMAi | ATEHRGW |
OrthoDBi | 679241at2759 |
Enzyme and pathway databases
PlantReactomei | R-OSA-1119314 Cellulose biosynthesis R-OSA-9627657 Regulation of leaf development |
Gene expression databases
Genevisiblei | Q2QNS6 OS |
Family and domain databases
Gene3Di | 3.90.550.10, 1 hit |
InterProi | View protein in InterPro IPR005150 Cellulose_synth IPR029044 Nucleotide-diphossugar_trans |
Pfami | View protein in Pfam PF03552 Cellulose_synt, 1 hit |
SUPFAMi | SSF53448 SSF53448, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | CSLD4_ORYSJ | |
Accessioni | Q2QNS6Primary (citable) accession number: Q2QNS6 Secondary accession number(s): A0A0N7KU71 Q8W1N5 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | February 26, 2008 |
Last sequence update: | January 24, 2006 | |
Last modified: | October 16, 2019 | |
This is version 86 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Plant Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
Complete proteome, Reference proteomeDocuments
- SIMILARITY comments
Index of protein domains and families - Oryza sativa (rice)
Index of Oryza sativa entries and their corresponding gene designations