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Protein
Submitted name:

Uncharacterized protein, isoform D

Gene

Dpse\GA12539

Organism
Drosophila pseudoobscura pseudoobscura (Fruit fly)
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized protein, isoform DImported
Gene namesi
Name:Dpse\GA12539Imported
ORF Names:Dpse_GA12539Imported, GA12539Imported
OrganismiDrosophila pseudoobscura pseudoobscura (Fruit fly)Imported
Taxonomic identifieri46245 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraHolometabolaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora
Proteomesi
  • UP000001819 Componenti: Partially assembled WGS sequence

Organism-specific databases

FlyBaseiFBgn0072585 Dpse\GA12539

Subcellular locationi

    Topology

    Feature keyPosition(s)DescriptionActionsGraphical viewLength
    Transmembranei1975 – 1994HelicalSequence analysisAdd BLAST20

    Keywords - Cellular componenti

    Membrane

    Expressioni

    Gene expression databases

    BgeeiFBgn0072585 Expressed in 4 organ(s), highest expression level in head

    Family & Domainsi

    Coiled coil

    Feature keyPosition(s)DescriptionActionsGraphical viewLength
    Coiled coili55 – 75Sequence analysisAdd BLAST21
    Coiled coili960 – 980Sequence analysisAdd BLAST21
    Coiled coili987 – 1010Sequence analysisAdd BLAST24
    Coiled coili1639 – 1659Sequence analysisAdd BLAST21

    Keywords - Domaini

    Coiled coilSequence analysis, Transmembrane, Transmembrane helixSequence analysis

    Phylogenomic databases

    InParanoidiQ2LYR9

    Sequence (1+)i

    Sequence statusi: Complete.

    This entry has 1 described isoform and 3 potential isoforms that are computationally mapped.Show allAlign All

    Q2LYR9-1 [UniParc]FASTAAdd to basket
    « Hide
            10         20         30         40         50
    MYLIQTVQTT WRPQLPLPKE LQLTDERHSD TKVISTKADI HYPQNYDENY
    60 70 80 90 100
    HQAVAAAAAA EEEEEQEQMD RLRGHQGGSI GGSSQQLSHK QKWSFGRLFR
    110 120 130 140 150
    GKKKDAAECS PSSSEEDRKA GFVPSQRQAP GSGKPKGKPG KSSSSRGSSR
    160 170 180 190 200
    YEEQAPPPPP PHRPQSIDHE FFLPVETIQQ QPEPYYQNQP GPGYYHRSMS
    210 220 230 240 250
    NSLDRRGLMQ QQHPHPHAHT QMGGKSRSAQ RKPPGAHHSS AEEELISLNS
    260 270 280 290 300
    STFSKYRSDE SIHSGGQALM QGSSLQSQSQ SQAQAQNSRR SRAARNERYY
    310 320 330 340 350
    KRLSRDGEQS HGGVPPLPNP QRYKTQPLPL SIYQPNAAYV QWQPQQKPLQ
    360 370 380 390 400
    NTIQNDGKRS ISYDSHIHLQ NVNGRMQSKP LPPPPPPRDP LRRVHAVGSS
    410 420 430 440 450
    SGDLRPVSYA FDHSGRCVSD DRIWQPAPHY QSVHSLNSQP SSSIASAPPS
    460 470 480 490 500
    QQPQQSQQQP QHHRRFITRS ERNAHPGKQS LPNGIDFHYV ADATPRSRKP
    510 520 530 540 550
    IHMMEAEKQE TPPSSGILRT SKSGLPTAAA APQPIMKPRS ISSSRLSELR
    560 570 580 590 600
    GGYPMPMYSE VLKPKRTPPT APASNALHDQ DNVVCGSLQI KPNYVEIRHR
    610 620 630 640 650
    DVQKTNSMPH HYQRRSGEDL PNKYEEYVAE KREQHQQAPP PVYPERKQSL
    660 670 680 690 700
    PAVPPLYFPR KKPANLEEAI NELEAIYKSL GLTEPQEPKA EVTPTMPEMM
    710 720 730 740 750
    PETAAPPKMR VPTPSDFEKF ALAHADEYDD EDSPTGEPDL VRDDVAYRNL
    760 770 780 790 800
    QLANLQHRSS ERQPPFGIPV GPIVPAPQSD YLHVEPIRVI KKKKSTSPDI
    810 820 830 840 850
    VKDDLAVRAL RKDPPGPKSS FHYPMQKKQR ATRTQSANIY NLIHRDAAKP
    860 870 880 890 900
    SGGDLRSYME LTKSIERAGS MSNLQAEATN DIPATLDLLR KLKAQDEEME
    910 920 930 940 950
    AVQKKAHAIP FRHPSQGGAI AHLPERLNTK EEPPKAPPVA APRKSLTPEP
    960 970 980 990 1000
    LLEDALNKIA QDAQASSIKL SQELHELRRE ALITAARPKL NAEQQKLEDE
    1010 1020 1030 1040 1050
    LQEIDAVSKA AKRCGQMLLD NLPDAGQEEE YQMQPQRKLH KEGKLIRAID
    1060 1070 1080 1090 1100
    EVSEAANAVC EKILKDIVTT EPPVIVHEAR QVKQPTGGAT GGAQAEHLVM
    1110 1120 1130 1140 1150
    PALIKKLDPI QSEKMEHIAR RCMRQLSELA EAQPDYDNLP AACNINAAPA
    1160 1170 1180 1190 1200
    TDAAAADATL ISTVPETLEE IDKIMQECER QAKGSTATAT GSGSTTDDQR
    1210 1220 1230 1240 1250
    TTAPSITSGS HSHSGGGSSC PPNVSTTASS FSSSSDCLAK SSSPSNASRL
    1260 1270 1280 1290 1300
    LSSSITSFNP YSSSDYIKSQ SSDYHAPSTD PIKTFSTTSY DVQSTTANNT
    1310 1320 1330 1340 1350
    TNSTMSTTSN TNTISSCTTN PRETNPETTA SCSVSPQPLQ LTPVRGTSSS
    1360 1370 1380 1390 1400
    PSQYNSSEEL AAIFGIEEQP KQRKQRQHQQ HHTGKGDAQG SPAARASTAS
    1410 1420 1430 1440 1450
    ASASASATTN APAMPPATAT TSSATNRVLN VASDVTTSPT SSNTSSNDSA
    1460 1470 1480 1490 1500
    SSCSSICNYK LETIPEQDQD HDHDPDQEED TALKLSPNFN RIYASKIRIV
    1510 1520 1530 1540 1550
    MEEEEPLVLD EEATVQQQEV TEEEAKILPA VGVETHFDSL SSLEEEVSSN
    1560 1570 1580 1590 1600
    PDSGNVSLTD YPLGGNHNHH ANASLELQTT YNSRFEVREH YVSEVSISAS
    1610 1620 1630 1640 1650
    EESSTDEEEQ TDTERTERGG DMEGRADGFP PLPTEEELLE SLREEREHNE
    1660 1670 1680 1690 1700
    RGAESAEHST EISGQTELRI EEDALSDDSL EEDIEVEVEI SSSEVTDNEE
    1710 1720 1730 1740 1750
    SESSLESDAK LDETVSLSEE VYKLASETLK IQENPLDEEP IDERNLSEGK
    1760 1770 1780 1790 1800
    RDQRKHNEEK LDERKLNEHK LDETLENECR FELEEVEFSL KQTEESDIKP
    1810 1820 1830 1840 1850
    NETEFNETLD ECDSAMQFPR RKSIVYETPA LNLSISEVKL NYETKVGEEM
    1860 1870 1880 1890 1900
    EAEPTTPVTD EANQSIDNDN DNDDDIPIND TSARNEEEPQ EKQGKSSGDV
    1910 1920 1930 1940 1950
    SETRKGLPAA AVVEEEEEEE QPTTSSKALS VFGEVRTVAP AADAAVGGAV
    1960 1970 1980 1990
    ARGGLTTLEH VFVACTVGLI TPNDLLTLCL IVIGVIIIIA IALAA
    Length:1,995
    Mass (Da):219,612
    Last modified:January 20, 2016 - v3
    Checksum:i53064D120DADB144
    GO

    Computationally mapped potential isoform sequencesi

    There are 3 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
    EntryEntry nameProtein names
    Gene namesLengthAnnotation
    A0A0R3P8W2A0A0R3P8W2_DROPS
    Uncharacterized protein, isoform B
    Dpse\GA12539 Dpse_GA12539, GA12539
    1,389Annotation score:
    A0A0R3P5H9A0A0R3P5H9_DROPS
    Uncharacterized protein, isoform E
    Dpse\GA12539 Dpse_GA12539, GA12539
    1,414Annotation score:
    A0A0R3P5C9A0A0R3P5C9_DROPS
    Uncharacterized protein, isoform C
    Dpse\GA12539 Dpse_GA12539, GA12539
    1,142Annotation score:

    Sequence databases

    Select the link destinations:
    EMBLi
    GenBanki
    DDBJi
    Links Updated
    CH379069 Genomic DNA Translation: EAL29792.3
    RefSeqiXP_001354054.3, XM_001354018.3

    Genome annotation databases

    EnsemblMetazoaiFBtr0372699; FBpp0334635; FBgn0072585
    GeneIDi4812803
    KEGGidpo:Dpse_GA12539

    Similar proteinsi

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBLi
    GenBanki
    DDBJi
    Links Updated
    CH379069 Genomic DNA Translation: EAL29792.3
    RefSeqiXP_001354054.3, XM_001354018.3

    3D structure databases

    ModBaseiSearch...
    MobiDBiSearch...

    Protocols and materials databases

    Structural Biology KnowledgebaseSearch...

    Genome annotation databases

    EnsemblMetazoaiFBtr0372699; FBpp0334635; FBgn0072585
    GeneIDi4812803
    KEGGidpo:Dpse_GA12539

    Organism-specific databases

    FlyBaseiFBgn0072585 Dpse\GA12539

    Phylogenomic databases

    InParanoidiQ2LYR9

    Gene expression databases

    BgeeiFBgn0072585 Expressed in 4 organ(s), highest expression level in head

    Family and domain databases

    ProtoNetiSearch...

    Entry informationi

    Entry nameiQ2LYR9_DROPS
    AccessioniPrimary (citable) accession number: Q2LYR9
    Entry historyiIntegrated into UniProtKB/TrEMBL: February 21, 2006
    Last sequence update: January 20, 2016
    Last modified: November 7, 2018
    This is version 46 of the entry and version 3 of the sequence. See complete history.
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported
    UniProt is an ELIXIR core data resource
    Main funding by: National Institutes of Health

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