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Protein

50S ribosomal protein L16

Gene

rplP

Organism
Staphylococcus aureus (strain NCTC 8325)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding, tRNA-binding

Enzyme and pathway databases

BioCyciSAUR93061:G1G5Y-2368-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L16UniRule annotation
Gene namesi
Name:rplPUniRule annotation
Ordered Locus Names:SAOUHSC_02505
OrganismiStaphylococcus aureus (strain NCTC 8325)
Taxonomic identifieri93061 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesStaphylococcaceaeStaphylococcus
Proteomesi
  • UP000008816 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002516751 – 14450S ribosomal protein L16Add BLAST144

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.UniRule annotation

Protein-protein interaction databases

STRINGi93061.SAOUHSC_02505

Structurei

Secondary structure

1144
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi29 – 36Combined sources8
Beta strandi40 – 43Combined sources4
Helixi44 – 57Combined sources14
Beta strandi63 – 65Combined sources3
Beta strandi72 – 74Combined sources3
Beta strandi92 – 97Combined sources6
Beta strandi102 – 109Combined sources8
Helixi111 – 122Combined sources12
Beta strandi125 – 127Combined sources3
Beta strandi129 – 134Combined sources6

3D structure databases

ProteinModelPortaliQ2FW13
SMRiQ2FW13
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uL16 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108R70 Bacteria
COG0197 LUCA
HOGENOMiHOG000164573
KOiK02878
OMAiKGAVEYW

Family and domain databases

CDDicd01433 Ribosomal_L16_L10e, 1 hit
Gene3Di3.90.1170.10, 1 hit
HAMAPiMF_01342 Ribosomal_L16, 1 hit
InterProiView protein in InterPro
IPR016180 Ribosomal_L10e/L16
IPR036920 Ribosomal_L10e/L16_sf
IPR000114 Ribosomal_L16
IPR020798 Ribosomal_L16_CS
PANTHERiPTHR12220 PTHR12220, 1 hit
PfamiView protein in Pfam
PF00252 Ribosomal_L16, 1 hit
PRINTSiPR00060 RIBOSOMALL16
SUPFAMiSSF54686 SSF54686, 1 hit
TIGRFAMsiTIGR01164 rplP_bact, 1 hit
PROSITEiView protein in PROSITE
PS00586 RIBOSOMAL_L16_1, 1 hit
PS00701 RIBOSOMAL_L16_2, 1 hit

Sequencei

Sequence statusi: Complete.

Q2FW13-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLLPKRVKYR RQHRPKTTGR SKGGNYVTFG EFGLQATTTS WITSRQIESA
60 70 80 90 100
RIAMTRYMKR GGKVWIKIFP HTPYTKKPLE VRMGAGKGAV EGWIAVVKPG
110 120 130 140
RILFEVAGVS EEVAREALRL ASHKLPVKTK FVKREELGGE TNES
Length:144
Mass (Da):16,242
Last modified:March 21, 2006 - v1
Checksum:i27B45FD1C2540213
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000253 Genomic DNA Translation: ABD31523.1
RefSeqiWP_000926310.1, NC_007795.1
YP_500972.1, NC_007795.1

Genome annotation databases

EnsemblBacteriaiABD31523; ABD31523; SAOUHSC_02505
GeneIDi3920881
KEGGisao:SAOUHSC_02505
PATRICifig|93061.5.peg.2260

Similar proteinsi

Entry informationi

Entry nameiRL16_STAA8
AccessioniPrimary (citable) accession number: Q2FW13
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 3, 2006
Last sequence update: March 21, 2006
Last modified: February 28, 2018
This is version 80 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

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