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Protein
Submitted name:

Small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha

Gene

sgta

Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Small glutamine-rich tetratricopeptide repeat (TPR)-containing, alphaImported
Gene namesi
Name:sgtaImported
ORF Names:TEgg131h20.1-001Imported
OrganismiXenopus tropicalis (Western clawed frog) (Silurana tropicalis)Imported
Taxonomic identifieri8364 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusSilurana
Proteomesi
  • UP000008143 Componenti: Unassembled WGS sequence

Organism-specific databases

XenbaseiXB-GENE-962231 sgta

Expressioni

Gene expression databases

BgeeiENSXETG00000003714

Interactioni

Protein-protein interaction databases

STRINGi8364.ENSXETP00000008020

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini88 – 189TPR_REGIONInterPro annotationAdd BLAST102
Repeati88 – 121TPRPROSITE-ProRule annotationAdd BLAST34
Repeati122 – 155TPRPROSITE-ProRule annotationAdd BLAST34
Repeati156 – 189TPRPROSITE-ProRule annotationAdd BLAST34

Keywords - Domaini

RepeatSAAS annotation, TPR repeatPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG0553 Eukaryota
COG0457 LUCA
GeneTreeiENSGT00730000110724
HOGENOMiHOG000208193
HOVERGENiHBG000885
KOiK16365
OMAiPAMMNMA
OrthoDBiEOG091G0C0Q
TreeFamiTF313092

Family and domain databases

Gene3Di1.25.40.10, 1 hit
InterProiView protein in InterPro
IPR032374 SGTA_dimer
IPR013026 TPR-contain_dom
IPR011990 TPR-like_helical_dom_sf
IPR001440 TPR_1
IPR019734 TPR_repeat
PfamiView protein in Pfam
PF16546 SGTA_dimer, 1 hit
PF00515 TPR_1, 3 hits
SMARTiView protein in SMART
SM00028 TPR, 3 hits
SUPFAMiSSF48452 SSF48452, 1 hit
PROSITEiView protein in PROSITE
PS50005 TPR, 3 hits
PS50293 TPR_REGION, 1 hit

Sequencei

Sequence statusi: Complete.

Q28H19-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MADKKRLAFS IIRHLHDQLR NGGLSSDAQE SLEVAIQCLE TAFEVSIEDS
60 70 80 90 100
NLAVPRSLQE IFTEATCQDS PQVNSGLASP CDEDVAEAER LKTEGNEQMK
110 120 130 140 150
LENFESAISY YSKALELNPT NAVYYCNRAA AYSKLGNYAG AVRDCEEAIT
160 170 180 190 200
IDPNYSKAYG RMGLALSSLN KHAEAVGFYK QALILDPDNE TYKSNLKIAE
210 220 230 240 250
QKMKELPSPM AAPGGFDLAG LLNNPGFMSM ASNLMNNPQV QQLMSGMISG
260 270 280 290 300
GHTPMAGAGA AAAGNTPPND LASLIQAGQQ FAQQMQQQNP ELIEQLRSQI
310
RSRPPSSSHD EQQE
Length:314
Mass (Da):34,097
Last modified:April 4, 2006 - v1
Checksum:iF1FA7677EC56A6AC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAMC01111105 Genomic DNA No translation available.
BC170780 mRNA Translation: AAI70780.1
BC171122 mRNA Translation: AAI71122.1
CR761100 mRNA Translation: CAJ81867.1
RefSeqiNP_001032333.1, NM_001037256.1
XP_012813953.1, XM_012958499.2
XP_012813959.1, XM_012958505.2
XP_012813964.1, XM_012958510.2
UniGeneiStr.24742

Genome annotation databases

EnsembliENSXETT00000008020; ENSXETP00000008020; ENSXETG00000003714
GeneIDi394994
KEGGixtr:394994

Similar proteinsi

Entry informationi

Entry nameiQ28H19_XENTR
AccessioniPrimary (citable) accession number: Q28H19
Entry historyiIntegrated into UniProtKB/TrEMBL: April 4, 2006
Last sequence update: April 4, 2006
Last modified: March 28, 2018
This is version 81 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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