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Entry version 97 (08 May 2019)
Sequence version 1 (18 Apr 2006)
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Protein

UvrABC system protein A

Gene

uvrA

Organism
Chlamydia felis (strain Fe/C-56) (Chlamydophila felis)
Status
Unreviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein inferred from homologyi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.SAAS annotation

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section describes a region in the protein which binds nucleotide phosphates. It always involves more than one amino acid and includes all residues involved in nucleotide-binding.<p><a href='/help/np_bind' target='_top'>More...</a></p>Nucleotide bindingi628 – 635ATPPROSITE-ProRule annotation8
Nucleotide bindingi1521 – 1528ATPPROSITE-ProRule annotation8

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionDNA-bindingSAAS annotation, Excision nucleaseSAAS annotation
Biological processDNA damage, DNA excisionSAAS annotation, DNA repair
LigandATP-bindingPROSITE-ProRule annotationSAAS annotation, Metal-binding, Nucleotide-binding, Zinc

Enzyme and pathway databases

BioCyc Collection of Pathway/Genome Databases

More...
BioCyci
CFEL264202:G1G29-343-MONOMER

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
UvrABC system protein ASAAS annotation
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:uvrAImported
Ordered Locus Names:CF0335Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiChlamydia felis (strain Fe/C-56) (Chlamydophila felis)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri264202 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaChlamydiaeChlamydialesChlamydiaceaeChlamydia/Chlamydophila groupChlamydia
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000001260 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

CytoplasmSAAS annotation

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction_section">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function_section">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Forms a heterotetramer with UvrB during the search for lesions.

SAAS annotation

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
264202.CF0335

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini582 – 910ABC transporterInterPro annotationAdd BLAST329
Domaini1478 – 1799ABC transporterInterPro annotationAdd BLAST322

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the ABC transporter superfamily. UvrA family.SAAS annotation

Keywords - Domaini

RepeatSAAS annotation, Zinc-fingerSAAS annotation

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
ENOG4105C5U Bacteria
COG0178 LUCA

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
HOG000266604

KEGG Orthology (KO)

More...
KOi
K03701

Identification of Orthologs from Complete Genome Data

More...
OMAi
SKHGWCP

Database of Orthologous Groups

More...
OrthoDBi
152379at2

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR003593 AAA+_ATPase
IPR003439 ABC_transporter-like
IPR027417 P-loop_NTPase
IPR004602 UvrA
IPR041552 UvrA_DNA-bd
IPR041102 UvrA_inter

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF00005 ABC_tran, 1 hit
PF17755 UvrA_DNA-bind, 1 hit
PF17760 UvrA_inter, 2 hits

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00382 AAA, 2 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF52540 SSF52540, 4 hits

TIGRFAMs; a protein family database

More...
TIGRFAMsi
TIGR00630 uvra, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50893 ABC_TRANSPORTER_2, 2 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

Q255D1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MPNLPVRISG ITVRNLKNIS IEFLPGEIVL LTGVSGSGKS SLAFDTVYAA
60 70 80 90 100
GRKRYVSTLP AFFATTLSSL PDPTVENIRG LSPTIAVKQN HFSHHAHATV
110 120 130 140 150
GSVTELSQHL ALLFSLDGEA RDPHTQKVLH LQSKEKILST LANIPDETQI
160 170 180 190 200
SLLAPLIDKS LTSIQECVRQ GYTQIRIDGV ISSIYPYLSS PINEETPVDI
210 220 230 240 250
LVDSFIKKES NNARMKVSLF SALNIGKGHC SINTGTHEEA FSTQVHIPET
260 270 280 290 300
QQTYTPLTPQ LFSPHSLEDR CVRCQGTGVY ITIVDLSLIQ NDLSIRENCC
310 320 330 340 350
KLAGNCSTYF YHALYQSLAD TLGFSLDTPW KDLSPSIQNA FLYGKKHLVL
360 370 380 390 400
PVRLFDSTLG KKSLTYKLWR GILNDIGEKV RYAAKPSKHI PEGTTASPCP
410 420 430 440 450
ACQGTGLGEY ACAATWQGKT FVEFQKMPLD EFFSFTSSIN TSSKSVREVL
460 470 480 490 500
EGLNNRLSIL INLGLSYLTP NRTLATLSGG EQERTALAKH LGAELSGITY
510 520 530 540 550
ILDEPSIGLH PRDTHKLIQV IQKLRDQGNS ILLVEHDDQM ISFCDRIIDI
560 570 580 590 600
GPRAGIFGGE VLFNGSPKEF LNSCDSLTAK YLRHELTIEI PEKRPKAKAT
610 620 630 640 650
LSLSHATTNN LKDVTISLPL ERITAVTGVS GSGKSSLIND TLVPAMERLI
660 670 680 690 700
QGEQEPNLYI NGGKIERIVH ITRDLPGRSQ RSIPLTYIKV FDDLRELFAQ
710 720 730 740 750
QPKSKRLGLT KGHFSFNLSL GSCTECLGIG SITLDDHNSI PCPLCHGKRF
760 770 780 790 800
QSQVLEVHYQ GKNIADILDM TAYEAEKFFM TTPHIHEKIH ALCSLGLDHL
810 820 830 840 850
PLGRPLSSLS GGEIQRLKLT YELLAPSKKP SLYILDEPTT GLHTHDIHAL
860 870 880 890 900
IHVLLSLTYQ GHTVVIIEHN MHIVKISDHV IELGPEGGNL GGYLLASCSP
910 920 930 940 950
EELILLDTHT AKALQPYFKK TKALPKLSEK PKKEHFLRDI SIQDAYHNNL
960 970 980 990 1000
KHIDITFPRN ALTVVSGPSA SGKHSLVFNI LYAAGNIAYA ELFPYYVRQA
1010 1020 1030 1040 1050
LIKQTPLPQV ESVRGLSPVI AIKKMGIRKN SRNSLASALD ITNGLEKLFA
1060 1070 1080 1090 1100
LLGKPHCPLT GALLEKITPQ TIVDQLFQEH ENSYVTITSP ISPEEDLITS
1110 1120 1130 1140 1150
LQTKQQEGYL KLFANNEFYD LEDPLPEILE DPAIVIQHTK ISKNHESSLL
1160 1170 1180 1190 1200
SSLTLAFSLS PTARLHIHDQ GEVTHLLVFT LGWQDSFGNS YPNITRKLLS
1210 1220 1230 1240 1250
RDHIEGQCQQ CCGSGKILKL SLMEHKDKIS NYSPLSLFEL FFPDSSSKPV
1260 1270 1280 1290 1300
LDLIKELNIL PKTRIQDLDT TTLEKLFQGT KAHAGLERIL MEHCNLVPSC
1310 1320 1330 1340 1350
PLLHPLIISD TCSACSGWGI HTYAQQVRIG QTSLIDIYLE DTTFLKNFLG
1360 1370 1380 1390 1400
KIHDNQAQPI IQDLQNRLTF INKVGLGYIT LGQQQDTLSD GEHYRLHLAK
1410 1420 1430 1440 1450
KISTNLTDIV YLLEDPLSGL HPQDTPTLVQ LLKELVTNNN TVIATDRSDV
1460 1470 1480 1490 1500
LQLYADHTVK LGPGSGPQGG YLSPHSPIPI EELEEHRKAL PKETLDVRLT
1510 1520 1530 1540 1550
IHNISNLHVQ APIHSIVAIA GVSGSGKTSL LTEGFLKRAQ NLIDSGYKHF
1560 1570 1580 1590 1600
SNVLFFDSHP LLSSQRSDIG TYFDITPHLR NFYASLTQAK ALNITASMLS
1610 1620 1630 1640 1650
TNTKQGQCSD CLGLGYRLID RAFYALEKRP CPNCSGYRIQ PLSQEVVYEG
1660 1670 1680 1690 1700
KHFGKLLQTP IEDIPEVFPF IQKIQAPLQA LIQAGLGYLP LGQNLSSLSL
1710 1720 1730 1740 1750
GEKISVKIAR FLYLPPKEPT LFLLDEISTS LDTNKKTQLQ QLFRSLVSQG
1760 1770 1780 1790 1800
HSIIYIDHDI HLLKHADYII ELGPGSGKYG GQVLFSGEPK NIASSKKSIL

KTYMQRL
Length:1,807
Mass (Da):200,108
Last modified:April 18, 2006 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iF0D975BA5825D391
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AP006861 Genomic DNA Translation: BAE81107.1

NCBI Reference Sequences

More...
RefSeqi
WP_011457887.1, NC_007899.1

Genome annotation databases

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
cfe:CF0335

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP006861 Genomic DNA Translation: BAE81107.1
RefSeqiWP_011457887.1, NC_007899.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

STRINGi264202.CF0335

Genome annotation databases

KEGGicfe:CF0335

Phylogenomic databases

eggNOGiENOG4105C5U Bacteria
COG0178 LUCA
HOGENOMiHOG000266604
KOiK03701
OMAiSKHGWCP
OrthoDBi152379at2

Enzyme and pathway databases

BioCyciCFEL264202:G1G29-343-MONOMER

Family and domain databases

InterProiView protein in InterPro
IPR003593 AAA+_ATPase
IPR003439 ABC_transporter-like
IPR027417 P-loop_NTPase
IPR004602 UvrA
IPR041552 UvrA_DNA-bd
IPR041102 UvrA_inter
PfamiView protein in Pfam
PF00005 ABC_tran, 1 hit
PF17755 UvrA_DNA-bind, 1 hit
PF17760 UvrA_inter, 2 hits
SMARTiView protein in SMART
SM00382 AAA, 2 hits
SUPFAMiSSF52540 SSF52540, 4 hits
TIGRFAMsiTIGR00630 uvra, 1 hit
PROSITEiView protein in PROSITE
PS50893 ABC_TRANSPORTER_2, 2 hits

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiQ255D1_CHLFF
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q255D1
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: April 18, 2006
Last sequence update: April 18, 2006
Last modified: May 8, 2019
This is version 97 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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