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Protein

40S ribosomal protein S7

Gene

rps-7

Organism
Caenorhabditis elegans
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-CEL-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-CEL-1799339 SRP-dependent cotranslational protein targeting to membrane
R-CEL-6791226 Major pathway of rRNA processing in the nucleolus and cytosol
R-CEL-72689 Formation of a pool of free 40S subunits
R-CEL-72695 Formation of the ternary complex, and subsequently, the 43S complex
R-CEL-72702 Ribosomal scanning and start codon recognition
R-CEL-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-CEL-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-CEL-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S7
Gene namesi
Name:rps-7
ORF Names:ZC434.2
OrganismiCaenorhabditis elegans
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome I

Organism-specific databases

WormBaseiZC434.2 ; CE06577 ; WBGene00004476 ; rps-7

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001742041 – 19440S ribosomal protein S7Add BLAST194

Proteomic databases

EPDiQ23312
PaxDbiQ23312
PeptideAtlasiQ23312
PRIDEiQ23312

Expressioni

Gene expression databases

BgeeiWBGene00004476

Interactioni

Protein-protein interaction databases

BioGridi38318, 6 interactors
DIPiDIP-26439N
IntActiQ23312, 3 interactors
STRINGi6239.ZC434.2.2

Structurei

3D structure databases

ProteinModelPortaliQ23312
SMRiQ23312
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG3320 Eukaryota
ENOG410ZYKB LUCA
GeneTreeiENSGT00390000014122
HOGENOMiHOG000197237
InParanoidiQ23312
KOiK02993
OMAiGFHRVQQ
OrthoDBiEOG091G0L94
PhylomeDBiQ23312

Family and domain databases

InterProiView protein in InterPro
IPR000554 Ribosomal_S7e
PANTHERiPTHR11278 PTHR11278, 1 hit
PfamiView protein in Pfam
PF01251 Ribosomal_S7e, 1 hit
PROSITEiView protein in PROSITE
PS00948 RIBOSOMAL_S7E, 1 hit

Sequencei

Sequence statusi: Complete.

Q23312-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPEIIGKLLK SDGKVVSEIE KQVSQALIDL ETNDDVQSQL KELYIVGVKE
60 70 80 90 100
VELGNKSAII IYVPVPQLKA FHKIHPALVR ELEKKFGGRD ILILAKRRIL
110 120 130 140 150
PKPQRGSKAR PQKQKRPRSR TLTAVHDAWL DELVYPAEVV GRRIRVKLDG
160 170 180 190
KKVYKVHLDK SHQTNVGHKI GVFASVYRKL TGKDVTFEFP DPIF
Length:194
Mass (Da):22,058
Last modified:November 1, 1996 - v1
Checksum:i38C8EF443831029C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z75714 Genomic DNA Translation: CAB00058.1
PIRiT27565
RefSeqiNP_492708.1, NM_060307.3
UniGeneiCel.6314

Genome annotation databases

EnsemblMetazoaiZC434.2; ZC434.2; WBGene00004476
GeneIDi172901
KEGGicel:CELE_ZC434.2
UCSCiZC434.2.1 c. elegans

Similar proteinsi

Entry informationi

Entry nameiRS7_CAEEL
AccessioniPrimary (citable) accession number: Q23312
Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 21, 2004
Last sequence update: November 1, 1996
Last modified: May 23, 2018
This is version 120 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Caenorhabditis elegans
    Caenorhabditis elegans: entries, gene names and cross-references to WormBase
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

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