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Protein
Submitted name:

Uncharacterized protein

Gene

CELE_W05H9.2

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Uncharacterized proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
ORF Names:CELE_W05H9.2Imported, W05H9.2Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiCaenorhabditis elegansImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri6239 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditinaRhabditomorphaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000001940 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome X

Organism-specific databases

WormBase

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WormBasei
W05H9.2 ; CE33720 ; WBGene00021049

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Proteomic databases

Encyclopedia of Proteome Dynamics

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EPDi
Q23178

PaxDb, a database of protein abundance averages across all three domains of life

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PaxDbi
Q23178

PeptideAtlas

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PeptideAtlasi
Q23178

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

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Bgeei
WBGene00021049 Expressed in 5 organ(s), highest expression level in multi-cellular organism

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and domains’ section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili109 – 129Sequence analysisAdd BLAST21
Coiled coili516 – 543Sequence analysisAdd BLAST28

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

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eggNOGi
ENOG410K830 Eukaryota
ENOG4110KT5 LUCA

Ensembl GeneTree

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GeneTreei
ENSGT00940000176816

InParanoid: Eukaryotic Ortholog Groups

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InParanoidi
Q23178

Identification of Orthologs from Complete Genome Data

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OMAi
PFDYEWL

Database of Orthologous Groups

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OrthoDBi
1688438at2759

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

Q23178-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MTPEDAQAAS SPDPSNGVRP EEQAFSLNLI NQDIFIHEEI RRIDTVVGLS
60 70 80 90 100
CTMSNLEKNC RDSQRLARFM KPNSFEEVPK FETVDEFQDY FKISILERRV
110 120 130 140 150
TFDQCLFISK NYAEKRAQLA DNIQNLTDDL WSKVPELNKR LDYANYVNFL
160 170 180 190 200
ITYTEMFHWI GTVMETEYQN GIHSFIPCQL IDIFHDYFET VQKAHNNGIA
210 220 230 240 250
DISNFSFLLY IRDRIVDALR DHFSIVTPMR QKKKIVEPPQ EISDRYNPFD
260 270 280 290 300
YEWLSGTVVS GKYHFPFMKF LAIDRMQQLE LSYYRAVIVA SKRKEELGFL
310 320 330 340 350
KNLRIPFPQS ADNANLLDKA LQTNETKLRQ DFCRILKILK KERGLDKTRA
360 370 380 390 400
VLYIQKMEQF NELCGVVRNK KKSTMDQITH CEPFNIKPKL RFIAVMASID
410 420 430 440 450
ALLLVIQRVY ALFVDKEKGI YGECVPESVL LTAAQLLKIT TVERCRNDDM
460 470 480 490 500
DKEISGKLEV LRVKVHNAVK NFYIKKESIN HGVFVEPDHD EAALKKIRFE
510 520 530 540 550
LTISENEFPP IVMHHASRML WHLRQQKKEL KRLNKEIHFA KAAELLWPKI
560 570 580 590 600
DGVMFQLNKV PGICAFVSNF DDHVDREKVK EVIAASELDW MNPEPEFRAG
610 620 630 640 650
VEIINGIHHI MDKYRGVPHC VEIRATLEAE FHAEMHFQRI NGQTYKQLAA
660 670 680 690 700
QFSQILIQEI DLTNSRIRYQ TKMQTAYLAH RIARMMAGTY MDYVCNNMKN
710 720 730 740 750
PPSRCRVRTP TPIPEDDLPE DTAEGSEEGR ESEETGSETG SDYATDEGPN
760 770 780 790 800
VGRRRVRRNV ELESDDDDED EEEDEEEEDG VERQFDPEEA ARVAFLLNTF
810 820 830 840 850
SMNGNVIFVE NEGDVEDDRV PDDVIDNFIR NVRRVHMEPD MSAPYLNIPL

D
Length:851
Mass (Da):98,952
Last modified:June 1, 2003 - v3
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i4AB52F524C4E014E
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

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DDBJi
Links Updated
BX284606 Genomic DNA Translation: CCD64549.1

NCBI Reference Sequences

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RefSeqi
NP_509049.3, NM_076648.4

UniGene gene-oriented nucleotide sequence clusters

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UniGenei
Cel.23081

Genome annotation databases

Ensembl metazoan genome annotation project

More...
EnsemblMetazoai
W05H9.2; W05H9.2; WBGene00021049

Database of genes from NCBI RefSeq genomes

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GeneIDi
180899

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
cel:CELE_W05H9.2

UCSC genome browser

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UCSCi
W05H9.2 c. elegans

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284606 Genomic DNA Translation: CCD64549.1
RefSeqiNP_509049.3, NM_076648.4
UniGeneiCel.23081

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

Proteomic databases

EPDiQ23178
PaxDbiQ23178
PeptideAtlasiQ23178

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiW05H9.2; W05H9.2; WBGene00021049
GeneIDi180899
KEGGicel:CELE_W05H9.2
UCSCiW05H9.2 c. elegans

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
180899
WormBaseiW05H9.2 ; CE33720 ; WBGene00021049

Phylogenomic databases

eggNOGiENOG410K830 Eukaryota
ENOG4110KT5 LUCA
GeneTreeiENSGT00940000176816
InParanoidiQ23178
OMAiPFDYEWL
OrthoDBi1688438at2759

Gene expression databases

BgeeiWBGene00021049 Expressed in 5 organ(s), highest expression level in multi-cellular organism

Family and domain databases

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiQ23178_CAEEL
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q23178
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: June 1, 2003
Last modified: January 16, 2019
This is version 91 of the entry and version 3 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
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