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Protein
Submitted name:

C-type LECtin

Gene

clec-7

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.PROSITE-ProRule annotation

GO - Molecular functioni

GO - Biological processi

  • defense response to Gram-positive bacterium Source: WormBase

Keywordsi

LigandLectinImported

Names & Taxonomyi

Protein namesi
Submitted name:
C-type LECtinImported
Gene namesi
Name:clec-7Imported
ORF Names:CELE_F10G2.3Imported, F10G2.3Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome V

Organism-specific databases

WormBaseiF10G2.3 ; CE09331 ; WBGene00017364 ; clec-7

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 19Sequence analysisAdd BLAST19
ChainiPRO_500420071520 – 417Sequence analysisAdd BLAST398

Keywords - PTMi

Disulfide bondSAAS annotation

Proteomic databases

PaxDbiQ22955
PeptideAtlasiQ22955

Expressioni

Gene expression databases

BgeeiWBGene00017364

Interactioni

Protein-protein interaction databases

STRINGi6239.F10G2.3

Structurei

3D structure databases

ProteinModelPortaliQ22955
SMRiQ22955
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini32 – 143C-type lectinInterPro annotationAdd BLAST112
Domaini165 – 282C-type lectinInterPro annotationAdd BLAST118
Domaini308 – 413CUBInterPro annotationAdd BLAST106

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiKOG4297 Eukaryota
ENOG410XPJ1 LUCA
GeneTreeiENSGT00440000034850
HOGENOMiHOG000016317
InParanoidiQ22955
OMAiVIFENIC
OrthoDBiEOG093703VT
PhylomeDBiQ22955

Family and domain databases

CDDicd00041 CUB, 1 hit
Gene3Di2.60.120.290, 1 hit
3.10.100.10, 2 hits
InterProiView protein in InterPro
IPR001304 C-type_lectin-like
IPR016186 C-type_lectin-like/link_sf
IPR016187 CTDL_fold
IPR000859 CUB_dom
IPR035914 Sperma_CUB_dom_sf
PfamiView protein in Pfam
PF00431 CUB, 1 hit
PF00059 Lectin_C, 2 hits
SMARTiView protein in SMART
SM00034 CLECT, 2 hits
SM00042 CUB, 1 hit
SUPFAMiSSF49854 SSF49854, 1 hit
SSF56436 SSF56436, 2 hits
PROSITEiView protein in PROSITE
PS50041 C_TYPE_LECTIN_2, 2 hits
PS01180 CUB, 1 hit

Sequencei

Sequence statusi: Complete.

Q22955-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MHLLIFVLFY FFNSYSVTSS KVPVCTNEFT LINNKCLKLF TTPANHSAAE
60 70 80 90 100
KTCRKYGATL VTVKNENDNH AISTFAGTSA SLLWIGLYCF GNDPSKCLWD
110 120 130 140 150
DSTGSADVYD NFASGFPLVD IGKCVYYSVQ GALTGKWLTE NCDLSSKAFM
160 170 180 190 200
CELPTTFSDS CIYNYNGYCY DYYAEASFVV AQNTCEQFCG DLATIHTANE
210 220 230 240 250
NRYILTVAQH YPSSTIVRIG ATWPASNVYQ WVDGLPWEYK NIDLTGPRGG
260 270 280 290 300
DCMVMSTRPP SPVAAGYWFG ASCTDERNFI CKRPAGLQCV GTPPSVTISP
310 320 330 340 350
IQDNPSFCNS TNLLAPGVVT SPNFPRNYNN NAFCTYQLST LGSYNILLRF
360 370 380 390 400
APFSLGTSDY VIVYDGESAS SPVIGNYSGT LVPFSLISSS NNLLVVFNGN
410
TGGQGFSARY TSYAPLI
Length:417
Mass (Da):45,619
Last modified:November 1, 1996 - v1
Checksum:iA812F9911BA122DD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA Translation: CCD62811.1
PIRiT29864
RefSeqiNP_504865.1, NM_072464.3
UniGeneiCel.4162

Genome annotation databases

EnsemblMetazoaiF10G2.3; F10G2.3; WBGene00017364
GeneIDi184314
KEGGicel:CELE_F10G2.3
UCSCiF10G2.3 c. elegans

Similar proteinsi

Entry informationi

Entry nameiQ22955_CAEEL
AccessioniPrimary (citable) accession number: Q22955
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: February 28, 2018
This is version 123 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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