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Protein

60S ribosomal protein L28

Gene

rpl-28

Organism
Caenorhabditis elegans
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L28
Gene namesi
Name:rpl-28
ORF Names:R11D1.8
OrganismiCaenorhabditis elegans
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome V

Organism-specific databases

WormBaseiR11D1.8 ; CE06313 ; WBGene00004442 ; rpl-28

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemoved1 Publication
ChainiPRO_00001223932 – 12660S ribosomal protein L28Add BLAST125

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei2N-acetylserine1 Publication1

Keywords - PTMi

Acetylation

Proteomic databases

EPDiQ21930
PaxDbiQ21930
PeptideAtlasiQ21930
PRIDEiQ21930

Expressioni

Gene expression databases

BgeeiWBGene00004442

Interactioni

Protein-protein interaction databases

BioGridi44759, 2 interactors
DIPiDIP-24374N
IntActiQ21930, 1 interactor
STRINGi6239.R11D1.8.1

Structurei

3D structure databases

ProteinModelPortaliQ21930
SMRiQ21930
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG3412 Eukaryota
ENOG4111T32 LUCA
HOGENOMiHOG000200513
InParanoidiQ21930
KOiK02903
OMAiMSDALVW
OrthoDBiEOG091G0W22
PhylomeDBiQ21930

Family and domain databases

InterProiView protein in InterPro
IPR029004 L28e/Mak16
IPR002672 Ribosomal_L28e
PANTHERiPTHR10544 PTHR10544, 1 hit
PfamiView protein in Pfam
PF01778 Ribosomal_L28e, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q21930-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSDALVWQVI RNNSAFLRTQ RGIGKRFSTE KFNLKKVNSP KYSGLANKHA
60 70 80 90 100
IDVSAAAKGV VVSTKNEKGR PAKAVTTSTL SKTPVASVRR LAKNAGFNKF
110 120
NKLAQRRAAA IVRSQVKKAK VQKTDA
Length:126
Mass (Da):13,725
Last modified:January 23, 2007 - v3
Checksum:i075EDF6CD3F56E68
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z75547 Genomic DNA Translation: CAA99898.1
PIRiT24181
RefSeqiNP_506180.1, NM_073779.5
UniGeneiCel.6544

Genome annotation databases

EnsemblMetazoaiR11D1.8.1; R11D1.8.1; WBGene00004442
R11D1.8.2; R11D1.8.2; WBGene00004442
GeneIDi179739
KEGGicel:CELE_R11D1.8
UCSCiR11D1.8.5 c. elegans

Similar proteinsi

Entry informationi

Entry nameiRL28_CAEEL
AccessioniPrimary (citable) accession number: Q21930
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 25, 2002
Last sequence update: January 23, 2007
Last modified: May 23, 2018
This is version 114 of the entry and version 3 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Caenorhabditis elegans
    Caenorhabditis elegans: entries, gene names and cross-references to WormBase
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

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