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Protein
Submitted name:

Yeast PRP (Splicing factor) related

Gene

prp-3

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Yeast PRP (Splicing factor) relatedImported
Gene namesi
Name:prp-3Imported
ORF Names:CELE_M03C11.7Imported, M03C11.7Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome III

Organism-specific databases

WormBaseiM03C11.7 ; CE03498 ; WBGene00010844 ; prp-3

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

EPDiQ21486
PaxDbiQ21486
PeptideAtlasiQ21486

Expressioni

Gene expression databases

BgeeiWBGene00010844

Interactioni

Protein-protein interaction databases

STRINGi6239.M03C11.7.1

Structurei

3D structure databases

ProteinModelPortaliQ21486
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini242 – 457PRP3InterPro annotationAdd BLAST216
Domaini481 – 604DUF1115InterPro annotationAdd BLAST124

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili114 – 134Sequence analysisAdd BLAST21
Coiled coili274 – 294Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG2769 Eukaryota
ENOG410XQV0 LUCA
GeneTreeiENSGT00390000011497
HOGENOMiHOG000205412
InParanoidiQ21486
KOiK12843
OMAiKGYDYEK
OrthoDBiEOG091G05VO
PhylomeDBiQ21486

Family and domain databases

InterProiView protein in InterPro
IPR010541 DUF1115
IPR013881 Pre-mRNA_splic_Prp3
IPR027104 Prp3
PANTHERiPTHR14212 PTHR14212, 1 hit
PfamiView protein in Pfam
PF06544 DUF1115, 1 hit
PF08572 PRP3, 1 hit

Sequencei

Sequence statusi: Complete.

Q21486-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGKLEDICDQ YLSRKKEQDK VIEAVERCLK KGYDYEKLKD RVQEAISDPQ
60 70 80 90 100
KARKVISAVC DHYPQLRKRT RTDRDGEDRD RKRDRTDDRR KPDASVPAAV
110 120 130 140 150
AEPQKPAEQS IEERLRAKEM MYKAQQEIEE TKRKMAIAAG TLQPKAALAQ
160 170 180 190 200
AKTQMVAPGG KSLSLGRDEA TMLMTHSMDK KSRMEELKAR LARTTVMAKI
210 220 230 240 250
DAMVGNSGAG VMAPLPEAVQ QAEKKVQQQI TKESKEPEKL IEYLDPRIQA
260 270 280 290 300
RTADRRRRGF NFHEKGEFEK LANKQRAMAK LERLQNEVSS AAQSTGISSA
310 320 330 340 350
VKLAMVTPTG TAKMENGVPD IEWWDMLVLD KVNYDEIPAE NDMERYSQTV
360 370 380 390 400
SELVEHPISM RAPTEPLTQQ YLKVYLTTKE KKKIRRQNRK EVLKEKTEKI
410 420 430 440 450
RLGLEKAPEP KVKISNLMRV LGNEAIQDPT KMEAQVRKQM AERLKKHETL
460 470 480 490 500
NAERKLTEDQ KRAKKTKKLS EDTSTAVNVS VYRVKSLAHP SKKFKVETNA
510 520 530 540 550
KQLQMSGAIM MHKAQNVIVV EGGPKQQKFY KNLMINRIKW SDEIIGQKKD
560 570 580 590 600
AEKDAPGERN LCEMIWEGQV KRRNFRDFTV HTATLEKQAR EFFEKHGVAQ
610 620
YWDLCYSTTV LLEGQDILPT A
Length:621
Mass (Da):71,197
Last modified:November 1, 1996 - v1
Checksum:i6E0ABDD08A1CD83E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284603 Genomic DNA Translation: CAA88957.1
PIRiT23692
RefSeqiNP_499300.1, NM_066899.7
UniGeneiCel.7473

Genome annotation databases

EnsemblMetazoaiM03C11.7; M03C11.7; WBGene00010844
GeneIDi176461
KEGGicel:CELE_M03C11.7
UCSCiM03C11.7.1 c. elegans

Similar proteinsi

Entry informationi

Entry nameiQ21486_CAEEL
AccessioniPrimary (citable) accession number: Q21486
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: December 20, 2017
This is version 109 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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