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Protein
Submitted name:

Heterogeneous nuclear ribonucleoprotein A/B

Gene

Hnrnpab

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionRibonucleoproteinImported, RNA-bindingPROSITE-ProRule annotation, Viral nucleoproteinImported

Names & Taxonomyi

Protein namesi
Submitted name:
Heterogeneous nuclear ribonucleoprotein A/BImported
Submitted name:
Heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_aImported
Submitted name:
S1 protein C2Imported
Gene namesi
Name:HnrnpabImported
Synonyms:HnrpabImported
ORF Names:mCG_6983Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 11

Organism-specific databases

MGIiMGI:1330294 Hnrnpab

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Virion

Expressioni

Gene expression databases

BgeeiENSMUSG00000020358 Expressed in 298 organ(s), highest expression level in primitive streak

Interactioni

Protein-protein interaction databases

IntActiQ20BD0, 1 interactor
STRINGi10090.ENSMUSP00000104731

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini75 – 160RRMInterPro annotationAdd BLAST86
Domaini159 – 238RRMInterPro annotationAdd BLAST80

Phylogenomic databases

eggNOGiKOG0118 Eukaryota
COG0724 LUCA
GeneTreeiENSGT00900000140835
HOGENOMiHOG000234441
HOVERGENiHBG002295
OMAiGAQSQNW
OrthoDBiEOG091G1CPI
TreeFamiTF314808

Family and domain databases

CDDicd12757 RRM1_hnRNPAB, 1 hit
Gene3Di3.30.70.330, 2 hits
InterProiView protein in InterPro
IPR012956 CARG-binding_factor_N
IPR034846 hnRNPAB_RRM1
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
PfamiView protein in Pfam
PF08143 CBFNT, 1 hit
PF00076 RRM_1, 2 hits
SMARTiView protein in SMART
SM00360 RRM, 2 hits
SUPFAMiSSF54928 SSF54928, 2 hits
PROSITEiView protein in PROSITE
PS50102 RRM, 2 hits

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.iShow all

Q20BD0-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSDAAEEQPM ETTGATENGH EAAPEGEAPV EPSAAAAAPA ASAGSGGGTT
60 70 80 90 100
TAPSGNQNGA EGDQINASKN EEDAGKMFVG GLSWDTSKKD LKDYFTKFGE
110 120 130 140 150
VVDCTIKMDP NTGRSRGFGF ILFKDSSSVE KVLDQKEHRL DGRVIDPKKA
160 170 180 190 200
MAMKKDPVKK IFVGGLNPEA TEEKIREYFG QFGEIEAIEL PIDPKLNKRR
210 220 230 240 250
GFVFITFKEE DPVKKVLEKK FHTVSGSKCE IKVAQPKEVY QQQQYGSGGR
260 270 280 290 300
GNRNRGNRGS GGGQSQSWNQ GYGNYWNQGY GYQQGYGPGY GGYDYSPYGY
310 320 330
YGYGPGYDYS QGSTNYGKSQ RRGGHQNNYK PY
Length:332
Mass (Da):36,211
Last modified:April 18, 2006 - v1
Checksum:i205FAF007B428CA6
GO

Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q99020ROAA_MOUSE
Heterogeneous nuclear ribonucleopro...
Hnrnpab Cbf-a, Cgbfa, Hnrpab
285Annotation score:
Q80XR6Q80XR6_MOUSE
Heterogeneous nuclear ribonucleopro...
Hnrnpab Hnrpab
311Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL645602 Genomic DNA No translation available.
DQ397821 mRNA Translation: ABD66224.1
CH466575 Genomic DNA Translation: EDL33661.1
RefSeqiNP_001041526.1, NM_001048061.1
UniGeneiMm.256875
Mm.280842

Genome annotation databases

EnsembliENSMUST00000109103; ENSMUSP00000104731; ENSMUSG00000020358
GeneIDi15384
UCSCiuc007itz.1 mouse

Similar proteinsi

Entry informationi

Entry nameiQ20BD0_MOUSE
AccessioniPrimary (citable) accession number: Q20BD0
Entry historyiIntegrated into UniProtKB/TrEMBL: April 18, 2006
Last sequence update: April 18, 2006
Last modified: September 12, 2018
This is version 107 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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