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Protein

Cytochrome c oxidase subunit 6A, mitochondrial

Gene

cox-6A

Organism
Caenorhabditis elegans
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.By similarity

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Recommended name:
Cytochrome c oxidase subunit 6A, mitochondrialCurated
Alternative name(s):
Cytochrome c oxidase polypeptide VIaCurated
Gene namesi
Name:cox-6AImported
Synonyms:tag-174Imported
ORF Names:F54D8.2Imported
OrganismiCaenorhabditis elegans
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome III

Organism-specific databases

WormBaseiF54D8.2 ; CE01308 ; WBGene00006519 ; cox-6A

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Membrane, Mitochondrion, Mitochondrion inner membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_0000006125? – 128Cytochrome c oxidase subunit 6A, mitochondrial
Transit peptidei1 – ?MitochondrionSequence analysis

Proteomic databases

EPDiQ20779
PaxDbiQ20779
PeptideAtlasiQ20779
PRIDEiQ20779

Expressioni

Gene expression databases

BgeeiWBGene00006519 Expressed in 5 organ(s), highest expression level in multi-cellular organism

Interactioni

Protein-protein interaction databases

IntActiQ20779, 1 interactor
MINTiQ20779
STRINGi6239.F54D8.2.5

Structurei

3D structure databases

ProteinModelPortaliQ20779
SMRiQ20779
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiKOG3469 Eukaryota
ENOG411253X LUCA
GeneTreeiENSGT00390000002756
HOGENOMiHOG000193965
InParanoidiQ20779
KOiK02266
OMAiCLALTMY
OrthoDBiEOG091G0C5F
PhylomeDBiQ20779

Family and domain databases

CDDicd00925 Cyt_c_Oxidase_VIa, 1 hit
Gene3Di4.10.95.10, 1 hit
InterProiView protein in InterPro
IPR001349 Cyt_c_oxidase_su6a
IPR018507 Cyt_c_oxidase_su6a_CS
IPR036418 Cyt_c_oxidase_su6a_sf
PANTHERiPTHR11504 PTHR11504, 1 hit
PfamiView protein in Pfam
PF02046 COX6A, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD006036 Cyt_c_oxidase_su6a, 1 hit
SUPFAMiSSF81411 SSF81411, 1 hit
PROSITEiView protein in PROSITE
PS01329 COX6A, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q20779-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MNRLAQPATR SVVKTFQRKS SGSFYGSNNV EGFKESYVTP LKQAHNASET
60 70 80 90 100
WKKIFFIASI PCLALTMYAA FKDHKKHMSH ERPEHVEYAF LNVRNKPFPW
110 120
SDGNHSLFHN KAEQFVPGVG FEADREKH
Length:128
Mass (Da):14,743
Last modified:November 1, 1996 - v1
Checksum:iEF4EA56A1CE6A233
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284603 Genomic DNA Translation: CCD67407.1
PIRiE88449
RefSeqiNP_498082.1, NM_065681.5
UniGeneiCel.18117

Genome annotation databases

EnsemblMetazoaiF54D8.2.1; F54D8.2.1; WBGene00006519
F54D8.2.2; F54D8.2.2; WBGene00006519
F54D8.2.3; F54D8.2.3; WBGene00006519
F54D8.2.4; F54D8.2.4; WBGene00006519
F54D8.2.5; F54D8.2.5; WBGene00006519
GeneIDi175693
KEGGicel:CELE_F54D8.2
UCSCiF54D8.2.1 c. elegans

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284603 Genomic DNA Translation: CCD67407.1
PIRiE88449
RefSeqiNP_498082.1, NM_065681.5
UniGeneiCel.18117

3D structure databases

ProteinModelPortaliQ20779
SMRiQ20779
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ20779, 1 interactor
MINTiQ20779
STRINGi6239.F54D8.2.5

Proteomic databases

EPDiQ20779
PaxDbiQ20779
PeptideAtlasiQ20779
PRIDEiQ20779

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiF54D8.2.1; F54D8.2.1; WBGene00006519
F54D8.2.2; F54D8.2.2; WBGene00006519
F54D8.2.3; F54D8.2.3; WBGene00006519
F54D8.2.4; F54D8.2.4; WBGene00006519
F54D8.2.5; F54D8.2.5; WBGene00006519
GeneIDi175693
KEGGicel:CELE_F54D8.2
UCSCiF54D8.2.1 c. elegans

Organism-specific databases

CTDi175693
WormBaseiF54D8.2 ; CE01308 ; WBGene00006519 ; cox-6A

Phylogenomic databases

eggNOGiKOG3469 Eukaryota
ENOG411253X LUCA
GeneTreeiENSGT00390000002756
HOGENOMiHOG000193965
InParanoidiQ20779
KOiK02266
OMAiCLALTMY
OrthoDBiEOG091G0C5F
PhylomeDBiQ20779

Miscellaneous databases

PROiPR:Q20779

Gene expression databases

BgeeiWBGene00006519 Expressed in 5 organ(s), highest expression level in multi-cellular organism

Family and domain databases

CDDicd00925 Cyt_c_Oxidase_VIa, 1 hit
Gene3Di4.10.95.10, 1 hit
InterProiView protein in InterPro
IPR001349 Cyt_c_oxidase_su6a
IPR018507 Cyt_c_oxidase_su6a_CS
IPR036418 Cyt_c_oxidase_su6a_sf
PANTHERiPTHR11504 PTHR11504, 1 hit
PfamiView protein in Pfam
PF02046 COX6A, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD006036 Cyt_c_oxidase_su6a, 1 hit
SUPFAMiSSF81411 SSF81411, 1 hit
PROSITEiView protein in PROSITE
PS01329 COX6A, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiCOX6A_CAEEL
AccessioniPrimary (citable) accession number: Q20779
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1996
Last modified: September 12, 2018
This is version 110 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Caenorhabditis elegans
    Caenorhabditis elegans: entries, gene names and cross-references to WormBase
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