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Protein
Submitted name:

Uncharacterized protein

Gene

CELE_F53B3.5

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:CELE_F53B3.5Imported, F53B3.5Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditinaRhabditomorphaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome X

Organism-specific databases

WormBaseiF53B3.5 ; CE47397 ; WBGene00018743

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei21 – 43HelicalSequence analysisAdd BLAST23
Transmembranei142 – 164HelicalSequence analysisAdd BLAST23
Transmembranei176 – 195HelicalSequence analysisAdd BLAST20
Transmembranei226 – 252HelicalSequence analysisAdd BLAST27

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

EPDiQ20713
PaxDbiQ20713
PeptideAtlasiQ20713

Expressioni

Gene expression databases

BgeeiWBGene00018743 Expressed in 5 organ(s), highest expression level in multi-cellular organism

Interactioni

Protein-protein interaction databases

STRINGi6239.F53B3.5

Structurei

3D structure databases

ProteinModelPortaliQ20713
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410IJ4Z Eukaryota
ENOG410XS7Z LUCA
GeneTreeiENSGT00520000058804
HOGENOMiHOG000016578
InParanoidiQ20713
OMAiPVETHCS
OrthoDBiEOG091G0H74

Family and domain databases

InterProiView protein in InterPro
IPR004031 PMP22/EMP/MP20/Claudin
PfamiView protein in Pfam
PF13903 Claudin_2, 1 hit

Sequencei

Sequence statusi: Complete.

Q20713-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MPKNYHLLTF FFSGSPMFSS PCHLSCASVF SLIGLGLVCF AVTTDNWVEV
60 70 80 90 100
QVNRREIINS FKREPELSLR LQNAFGHNNI YFSRNYGLFN LCFPDTVPQD
110 120 130 140 150
VGSFSKMGSP CIWSNEFMVP ESKKEHFSNN ELYRHYAAKA TIIAYVVGIV
160 170 180 190 200
FVVLSFIVGL IGCWNRSKKF IMSTGILLIL AGLSMSVAML LWHYVAYSER
210 220 230 240 250
YTLDVEPYYK SWEPILKLTS RHNYGWSYIV SWIGIGFIVI GSAFMFFAYA
260 270 280 290 300
AVKREEEDAL TAKHGAYMMP NYYDKGAGTI VPYNYNTYAG YGGYPYYNQY
310
NTAGYGYMTY GR
Length:312
Mass (Da):35,639
Last modified:May 16, 2012 - v3
Checksum:i7EC28D96EA2348D9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284606 Genomic DNA Translation: CCD61862.2
RefSeqiNP_508499.3, NM_076098.6
UniGeneiCel.22801

Genome annotation databases

EnsemblMetazoaiF53B3.5; F53B3.5; WBGene00018743
GeneIDi180578
KEGGicel:CELE_F53B3.5
UCSCiF53B3.5 c. elegans

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284606 Genomic DNA Translation: CCD61862.2
RefSeqiNP_508499.3, NM_076098.6
UniGeneiCel.22801

3D structure databases

ProteinModelPortaliQ20713
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.F53B3.5

Proteomic databases

EPDiQ20713
PaxDbiQ20713
PeptideAtlasiQ20713

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiF53B3.5; F53B3.5; WBGene00018743
GeneIDi180578
KEGGicel:CELE_F53B3.5
UCSCiF53B3.5 c. elegans

Organism-specific databases

CTDi180578
WormBaseiF53B3.5 ; CE47397 ; WBGene00018743

Phylogenomic databases

eggNOGiENOG410IJ4Z Eukaryota
ENOG410XS7Z LUCA
GeneTreeiENSGT00520000058804
HOGENOMiHOG000016578
InParanoidiQ20713
OMAiPVETHCS
OrthoDBiEOG091G0H74

Gene expression databases

BgeeiWBGene00018743 Expressed in 5 organ(s), highest expression level in multi-cellular organism

Family and domain databases

InterProiView protein in InterPro
IPR004031 PMP22/EMP/MP20/Claudin
PfamiView protein in Pfam
PF13903 Claudin_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiQ20713_CAEEL
AccessioniPrimary (citable) accession number: Q20713
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: May 16, 2012
Last modified: November 7, 2018
This is version 107 of the entry and version 3 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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