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Protein

50S ribosomal protein L25

Gene

rplY

Organism
Rickettsia bellii (strain RML369-C)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L25UniRule annotation
Alternative name(s):
General stress protein CTCUniRule annotation
Gene namesi
Name:rplYUniRule annotation
Synonyms:ctcUniRule annotation
Ordered Locus Names:RBE_0862
OrganismiRickettsia bellii (strain RML369-C)
Taxonomic identifieri336407 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiabelli group
Proteomesi
  • UP000001951 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002442391 – 20250S ribosomal protein L25Add BLAST202

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S rRNA. Binds to the 5S rRNA independently of L5 and L18.UniRule annotation

Structurei

3D structure databases

ProteinModelPortaliQ1RI71
SMRiQ1RI71
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000214907
KOiK02897
OMAiGDSIHIS
OrthoDBiPOG091H03T9

Family and domain databases

CDDicd00495 Ribosomal_L25_TL5_CTC, 1 hit
Gene3Di2.170.120.20, 1 hit
2.40.240.10, 1 hit
HAMAPiMF_01336 Ribosomal_L25, 1 hit
MF_01334 Ribosomal_L25_CTC, 1 hit
InterProiView protein in InterPro
IPR020056 Rbsml_L25/Gln-tRNA_synth_N
IPR029751 Ribosomal_L25
IPR011035 Ribosomal_L25/Gln-tRNA_synth
IPR020057 Ribosomal_L25_b-dom
IPR037121 Ribosomal_L25_C
IPR001021 Ribosomal_L25_long
IPR020055 Ribosomal_L25_short
PfamiView protein in Pfam
PF01386 Ribosomal_L25p, 1 hit
PF14693 Ribosomal_TL5_C, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD012503 Ribosomal_L25, 1 hit
SUPFAMiSSF50715 SSF50715, 1 hit
TIGRFAMsiTIGR00731 bL25_bact_ctc, 1 hit

Sequencei

Sequence statusi: Complete.

Q1RI71-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSEILELEAK SRNEFGTGAA RALRREGRVP AIIYGAKKTP VSISLEEKEI
60 70 80 90 100
TKYYRKPAFI SQLINLTIEG TQYKVLPKAV ELHPVTDIVR HVDFVFLEDK
110 120 130 140 150
TQKMEVPVVY EGKERALGVK RGGYFNIVKR RVTLLCDVNN IPRNVTIDVT
160 170 180 190 200
NMPIATSLKS SKVKLPEGCS FTTKKEFVLA TIIGRRGAKT EAEGEQTAEA

AK
Length:202
Mass (Da):22,553
Last modified:May 16, 2006 - v1
Checksum:i376246DAEF593B05
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000087 Genomic DNA Translation: ABE04943.1
RefSeqiWP_011477528.1, NC_007940.1

Genome annotation databases

EnsemblBacteriaiABE04943; ABE04943; RBE_0862
KEGGirbe:RBE_0862

Similar proteinsi

Entry informationi

Entry nameiRL25_RICBR
AccessioniPrimary (citable) accession number: Q1RI71
Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 27, 2006
Last sequence update: May 16, 2006
Last modified: February 28, 2018
This is version 74 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. Rickettsia bellii strain RML369-C
    Rickettsia bellii (strain RML369-C): entries and gene names
  3. SIMILARITY comments
    Index of protein domains and families

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