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Protein
Submitted name:

Putative DNA-binding transcriptional regulator

Gene

ydcN

Organism
Cupriavidus metallidurans (strain ATCC 43123 / DSM 2839 / NBRC 102507 / CH34) (Ralstonia metallidurans)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionDNA-bindingImported

Names & Taxonomyi

Protein namesi
Submitted name:
Putative DNA-binding transcriptional regulatorImported
Gene namesi
Name:ydcNImported
Ordered Locus Names:Rmet_1481Imported
OrganismiCupriavidus metallidurans (strain ATCC 43123 / DSM 2839 / NBRC 102507 / CH34) (Ralstonia metallidurans)Imported
Taxonomic identifieri266264 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeCupriavidus
Proteomesi
  • UP000002429 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi266264.Rmet_1481

Structurei

3D structure databases

ProteinModelPortaliQ1LNB2
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini29 – 83HTH cro/C1-typeInterPro annotationAdd BLAST55

Phylogenomic databases

eggNOGiENOG4105HN6 Bacteria
COG1396 LUCA
HOGENOMiHOG000225390
OMAiEIDRSYM
OrthoDBiPOG091H054U

Family and domain databases

CDDicd00093 HTH_XRE, 1 hit
InterProiView protein in InterPro
IPR001387 Cro/C1-type_HTH
IPR010982 Lambda_DNA-bd_dom_sf
PfamiView protein in Pfam
PF01381 HTH_3, 1 hit
SMARTiView protein in SMART
SM00530 HTH_XRE, 1 hit
SUPFAMiSSF47413 SSF47413, 1 hit
PROSITEiView protein in PROSITE
PS50943 HTH_CROC1, 1 hit

Sequencei

Sequence statusi: Complete.

Q1LNB2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQKRTVQRGR PAGSTTHDAE LAHAFGAAVR ALRMERGIAQ ESLAHQAGIE
60 70 80 90
RSHMGKIERG EHMPTLAIIF KIAGALECST AVLMSEAESQ LAAAAQP
Length:97
Mass (Da):10,332
Last modified:May 30, 2006 - v1
Checksum:i53285F6D4F5F98BD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000352 Genomic DNA Translation: ABF08364.1
RefSeqiWP_011516230.1, NC_007973.1

Genome annotation databases

EnsemblBacteriaiABF08364; ABF08364; Rmet_1481
GeneIDi24149477
KEGGirme:Rmet_1481

Similar proteinsi

Entry informationi

Entry nameiQ1LNB2_CUPMC
AccessioniPrimary (citable) accession number: Q1LNB2
Entry historyiIntegrated into UniProtKB/TrEMBL: May 30, 2006
Last sequence update: May 30, 2006
Last modified: February 28, 2018
This is version 58 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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