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Protein

ATP synthase mitochondrial F1 complex assembly factor 1

Gene

atpaf1

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

May play an essential role for the assembly of the mitochondrial F1-F0 complex.By similarity

GO - Biological processi

Names & Taxonomyi

Protein namesi
Recommended name:
ATP synthase mitochondrial F1 complex assembly factor 1
Gene namesi
Name:atpaf1
ORF Names:si:dkey-171o17.2, zgc:110583
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Unplaced

Organism-specific databases

ZFINiZDB-GENE-030219-10 atpaf1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_0000318917? – 302ATP synthase mitochondrial F1 complex assembly factor 1
Transit peptidei1 – ?MitochondrionSequence analysis

Proteomic databases

PaxDbiQ1L987

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000110144

Structurei

3D structure databases

ProteinModelPortaliQ1L987
SMRiQ1L987
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ATP11 family.Curated

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiKOG3281 Eukaryota
ENOG4111CKE LUCA
HOGENOMiHOG000015161
HOVERGENiHBG106254
InParanoidiQ1L987
KOiK07555
PhylomeDBiQ1L987

Family and domain databases

InterProiView protein in InterPro
IPR010591 ATP11
PANTHERiPTHR13126 PTHR13126, 1 hit
PfamiView protein in Pfam
PF06644 ATP11, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.iShow all

Q1L987-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MWDGEKMAAA MVQMSCLYRG MLAVRNHGIR PLIPGLVPSH FRAFSMKKEP
60 70 80 90 100
ELEENPYYSK YEEKIRKLRS SKPQEYESRL EKRTELKTEP LGRSRQAEFV
110 120 130 140 150
KYMEKELDKR GKDGDGGFTK DKTLGSILNL EMVQEKSGAE ITELWMQYFS
160 170 180 190 200
KKDTISAVIP SSTFDVIFGR AKSCPTFLYA LPQNEGYEFF VGQWAGNELH
210 220 230 240 250
FTSLINVQTM GENAPSQLIL YHYTDLQKDK DIVLMTAEMD SKFVTVHQAQ
260 270 280 290 300
CLANQVQLFY GSQRLETFRL VETFNHKPEE FKHMAVIAEL EQSGIGPAVT

TK
Length:302
Mass (Da):34,671
Last modified:February 26, 2008 - v2
Checksum:i01A03EA3AEDDD7A1
GO

Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
F1Q4Z5F1Q4Z5_DANRE
ATP synthase mitochondrial F1 compl...
atpaf1
304Annotation score:
A0A2R8Q607A0A2R8Q607_DANRE
ATP synthase mitochondrial F1 compl...
atpaf1
328Annotation score:

Sequence cautioni

The sequence AAH92940 differs from that shown. Reason: Erroneous initiation.Curated
The sequence CAK05298 differs from that shown. Reason: Erroneous initiation.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR381682 Genomic DNA Translation: CAK05298.1 Different initiation.
BC092940 mRNA Translation: AAH92940.1 Different initiation.
RefSeqiNP_001017907.2, NM_001017907.2
UniGeneiDr.43219

Genome annotation databases

GeneIDi550606
KEGGidre:550606

Similar proteinsi

Entry informationi

Entry nameiATPF1_DANRE
AccessioniPrimary (citable) accession number: Q1L987
Secondary accession number(s): Q568A9
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 26, 2008
Last sequence update: February 26, 2008
Last modified: May 23, 2018
This is version 64 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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