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Entry version 31 (12 Aug 2020)
Sequence version 1 (13 Jun 2006)
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Protein

Uncharacterized protein VP1

Gene

S1

Organism
Micromonas pusilla reovirus (isolate Netherlands/2005) (MpRV)
Status
Reviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Uncharacterized protein VP1
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:S1
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMicromonas pusilla reovirus (isolate Netherlands/2005) (MpRV)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri649596 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiVirusesRiboviriaOrthornaviraeDuplornaviricotaResentoviricetesReoviralesReoviridaeSedoreovirinaeMimoreovirus
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section only exists in viral entries and indicates the host(s) either as a specific organism or taxonomic group of organisms that are susceptible to be infected by a virus.<p><a href='/help/virus_host' target='_top'>More...</a></p>Virus hostiMicromonas pusilla (Picoplanktonic green alga) (Chromulina pusilla) [TaxID: 38833]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000349 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Genome

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00004041631 – 1897Uncharacterized protein VP1Add BLAST1897

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q1I0V1

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini1661 – 1888Peptidase S74PROSITE-ProRule annotationAdd BLAST228

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and domains' section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili1865 – 1894Sequence analysisAdd BLAST30

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi540 – 546Poly-Asp7
Compositional biasi547 – 550Poly-Pro4
Compositional biasi1284 – 1287Poly-Thr4
Compositional biasi1482 – 1485Poly-Thr4

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini

Coiled coil

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR030392, S74_ICA

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF13884, Peptidase_S74, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS51688, ICA, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

Q1I0V1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MDNVISNIQT SLHEVHGRFE TSGLNLTSLT SRVSALESGI DEDFSGQLSL
60 70 80 90 100
KADKNEVAKF TSNSNVVTSY SVSQLGAKIN NLEISDDNLQ SSKVNKTRVS
110 120 130 140 150
IALDDNGNDI SDYTLSQEGL GNKLKVMDNE IGLRALTSRI ASFTRDGVLT
160 170 180 190 200
NLSSVELGAR LIATESNADT RALKSEVSSH TDAENVTTTY GVTSLGAELH
210 220 230 240 250
RIAVAVNSLD TYVLKTEVSR LESNGVVVPE YTLTQTELGA KLKNIVDSIS
260 270 280 290 300
NFVVNTQVSK NYDEGTLNYE LNAYTLSDYE LGAMLERFDT THLLKSQVSK
310 320 330 340 350
RYVLNADGSV SNDFNSDYTL SDFELGTKLF DIDTLLNTKI SGEEVSINTS
360 370 380 390 400
DPAYTLNQSE LGTLLKTLTG RIDLVSPADA DSSIFALKTS VSTHASNTAY
410 420 430 440 450
TLSTTALATK LESMDSLLSS HGTLIDSKAS ISNMNERALQ SRVSLKFINN
460 470 480 490 500
DGVTIDEKFT CSVLELGSLL FNMDAATEAI ARNYVTDEEL AAAVATAVAT
510 520 530 540 550
TGALTSTSLL TTTVSTITKG GSSVVRTAAD LARAVFGGGD SDDDDDPPPP
560 570 580 590 600
VFIYRSEGIF RPANWGSDGN VDGYSRPMIE GRENIYASDG TAQDLHSYII
610 620 630 640 650
NLVAGNAKVF YRDVSYTSKI RLLGSSGSAD DKAAQYGPPA STSYFFPAPA
660 670 680 690 700
SLATVEAGLS WGSSTTRTQS DGTTLSGYTG GIHVLSCFGT SRFEGRSESR
710 720 730 740 750
KVVWLTGAGT AASSTLDAKL AFDGTGGDAP IHVFGESTTK YGLDLHDAGL
760 770 780 790 800
VMRNSQSNAK IDIKYHSSNL VFASLTPNVI PASPDILESI LTIDSSANSV
810 820 830 840 850
GIAGGASSQY KLYVHGGANF TSGITSSSAS ITGNNNSIPS LSISNTTVGA
860 870 880 890 900
KKEFKMSTDQ DGLIIEYGTA TSGVVVMDTR ISMNDTFTTV DSVGTNSGLE
910 920 930 940 950
VVGKLGNKAS MVLRHMPNSD NTKGTITLGR YLSIKTDLDA SRLYTGYTSL
960 970 980 990 1000
DATELIYMDN SNVIVKGDLS VSGNISLIDT SVTPNTTTNI VSGISTALGR
1010 1020 1030 1040 1050
VSTLINGGDL SMLRPDGTSI VVRAANIESI GHPAYTVTDE QGVVTSVERT
1060 1070 1080 1090 1100
GLFLRPDSFA VDDQIDARLT SVGLTEGDGN ENNPLTLNVY TIPQIDGIIA
1110 1120 1130 1140 1150
EGHVAGSVSR IIFSSSETLG SRTFPSVAIT PINNPFITNA TITNTIVGIK
1160 1170 1180 1190 1200
RVTVSGNSNE QGSGYVAGDT ITISDSFGTG TNAVFTVVNA SSGGVDGGST
1210 1220 1230 1240 1250
SLTITNPGAY TSISGTPIVI VEENPTYPAV TGITQQSSSG SGTGVTFSVE
1260 1270 1280 1290 1300
LSVISVDIFN AGKGYVTSPS VVVSGTYVDT VSNTTTTSGI QSAVAVLHTT
1310 1320 1330 1340 1350
SNVTVLDSRF SKAATLSISN TATQLTSALN GYVSTSDLGD ELANYYNIDE
1360 1370 1380 1390 1400
IVEGFAPIAA PGETYAYLST TSLENYQTRA ASNILYQAKE TADNAYIRAS
1410 1420 1430 1440 1450
DLTASGTGFY DKTTSDERYQ AQPASGESFA LASSLVNLVD TSTTALTNYS
1460 1470 1480 1490 1500
TTNEASTLYQ AKEDLNDPYV LRSTVSLDNY DTTTTINEKI AGVSSHFTKS
1510 1520 1530 1540 1550
GNNITYNYAG NVGIGGTPNT KLEVYGSIQA LPITDTSCVF GNARVGGGAY
1560 1570 1580 1590 1600
AGYAHFTHAA INPTHFGNYA LLQYSSGHTF LNCSAGSGVG LSFRKNNADW
1610 1620 1630 1640 1650
MEYQGNGLLY VTSGNTRYIS YIGFQYNPSG LAAGIMAGTG NIVVSMKVLY
1660 1670 1680 1690 1700
AIECQRILVV SDERVKTNIR DVNDHEALDI IRLIKPKKFE YIDKESAGPG
1710 1720 1730 1740 1750
TIYGFIAQDI IQHVPECVKK GPGVIANIMD TARVCNGRTL IFERFDTSNL
1760 1770 1780 1790 1800
KGVNGTIQVL DVDGKNHDVI VETILDSRTV IINKDLSAYT GSVDENGVPQ
1810 1820 1830 1840 1850
KVKHTTTLTQ SEYDAYEDKS DIVKDGDTYT RTEYSNVGDN VFVRGEHVDD
1860 1870 1880 1890
FHTMDKDHII AITTAALQEI DRQLQLEKAK VISLESRLSA LELKFGV
Length:1,897
Mass (Da):201,347
Last modified:June 13, 2006 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iAC68A312445ED649
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
DQ126101 Genomic RNA Translation: AAZ94041.1

NCBI Reference Sequences

More...
RefSeqi
YP_654544.1, NC_008171.1

Genome annotation databases

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
5076663

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
vg:5076663

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DQ126101 Genomic RNA Translation: AAZ94041.1
RefSeqiYP_654544.1, NC_008171.1

3D structure databases

SMRiQ1I0V1
ModBaseiSearch...

Genome annotation databases

GeneIDi5076663
KEGGivg:5076663

Family and domain databases

InterProiView protein in InterPro
IPR030392, S74_ICA
PfamiView protein in Pfam
PF13884, Peptidase_S74, 1 hit
PROSITEiView protein in PROSITE
PS51688, ICA, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiVP1_MPRVN
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q1I0V1
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 8, 2011
Last sequence update: June 13, 2006
Last modified: August 12, 2020
This is version 31 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome
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