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Entry version 92 (08 May 2019)
Sequence version 1 (11 Jul 2006)
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Protein

CMRF35-like molecule 9

Gene

Cd300lg

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Receptor which may mediate L-selectin-dependent lymphocyte rollings. Binds SELL in a calcium dependent manner. Binds lymphocyte.2 Publications

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionReceptor
Biological processImmunity

Enzyme and pathway databases

Reactome - a knowledgebase of biological pathways and processes

More...
Reactomei
R-MMU-198933 Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
CMRF35-like molecule 9
Short name:
CLM-9
Alternative name(s):
CD300 antigen-like family member G
Nepmucin
CD_antigen: CD300g
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Cd300lg
Synonyms:Clm9, D11Ertd736e
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMus musculus (Mouse)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10090 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000589 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 11

Organism-specific databases

Mouse genome database (MGD) from Mouse Genome Informatics (MGI)

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MGIi
MGI:1289168 Cd300lg

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular_location_section">'Subcellular location'</a> section describes the subcellular compartment where each non-membrane region of a membrane-spanning protein is found.<p><a href='/help/topo_dom' target='_top'>More...</a></p>Topological domaini19 – 204ExtracellularSequence analysisAdd BLAST186
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular_location_section">'Subcellular location'</a> section describes the extent of a membrane-spanning region of the protein. It denotes the presence of both alpha-helical transmembrane regions and the membrane spanning regions of beta-barrel transmembrane proteins.<p><a href='/help/transmem' target='_top'>More...</a></p>Transmembranei205 – 225HelicalSequence analysisAdd BLAST21
Topological domaini226 – 331CytoplasmicSequence analysisAdd BLAST106

Keywords - Cellular componenti

Cell membrane, Endosome, Membrane

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section denotes the presence of an N-terminal signal peptide.<p><a href='/help/signal' target='_top'>More...</a></p>Signal peptidei1 – 18By similarityAdd BLAST18
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_000030611319 – 331CMRF35-like molecule 9Add BLAST313

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the PTM / Processing":/help/ptm_processing_section section describes the positions of cysteine residues participating in disulfide bonds.<p><a href='/help/disulfid' target='_top'>More...</a></p>Disulfide bondi37 ↔ 106PROSITE-ProRule annotation
<p>This subsection of the <a href="http://www.uniprot.org/help/ptm_processing_section">PTM / Processing</a> section specifies the position and type of each covalently attached glycan group (mono-, di-, or polysaccharide).<p><a href='/help/carbohyd' target='_top'>More...</a></p>Glycosylationi136O-linked (GalNAc...) threonineSequence analysis1
Glycosylationi140O-linked (GalNAc...) serineSequence analysis1
Glycosylationi143O-linked (GalNAc...) threonineSequence analysis1
Glycosylationi145O-linked (GalNAc...) serineSequence analysis1
Glycosylationi150O-linked (GalNAc...) threonineSequence analysis1
Glycosylationi152O-linked (GalNAc...) threonineSequence analysis1
Glycosylationi154O-linked (GalNAc...) serineSequence analysis1
Glycosylationi164O-linked (GalNAc...) threonineSequence analysis1
Glycosylationi181O-linked (GalNAc...) threonineSequence analysis1
Glycosylationi182O-linked (GalNAc...) threonineSequence analysis1
Glycosylationi186O-linked (GalNAc...) serineSequence analysis1

<p>This subsection of the <a href="http://www.uniprot.org/help/ptm_processing_section">PTM/processing</a> section describes post-translational modifications (PTMs). This subsection <strong>complements</strong> the information provided at the sequence level or describes modifications for which <strong>position-specific data is not yet available</strong>.<p><a href='/help/post-translational_modification' target='_top'>More...</a></p>Post-translational modificationi

O-glycosylated with sialylated oligosaccharides.1 Publication

Keywords - PTMi

Disulfide bond, Glycoprotein

Proteomic databases

MaxQB - The MaxQuant DataBase

More...
MaxQBi
Q1ERP8

PaxDb, a database of protein abundance averages across all three domains of life

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PaxDbi
Q1ERP8

PeptideAtlas

More...
PeptideAtlasi
Q1ERP8

PRoteomics IDEntifications database

More...
PRIDEi
Q1ERP8

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q1ERP8

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...
PhosphoSitePlusi
Q1ERP8

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

<p>This subsection of the ‘Expression’ section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms. By default, the information is derived from experiments at the mRNA level, unless specified ‘at protein level’. <br></br>Examples: <a href="http://www.uniprot.org/uniprot/P92958#expression">P92958</a>, <a href="http://www.uniprot.org/uniprot/Q8TDN4#expression">Q8TDN4</a>, <a href="http://www.uniprot.org/uniprot/O14734#expression">O14734</a><p><a href='/help/tissue_specificity' target='_top'>More...</a></p>Tissue specificityi

Expressed in monocyte cell lines. Expressed in certain types of endothelial and myeloid lineage cells. Expressed in mesenteric lymph nodes (LNs), spleen, thymus, lung, heart and kidney. Expressed in high endothelial venules (HEVs) in peripheral and mesenteric LNs (at protein level). Highly expressed in heart. Slightly expressed in spleen and thymus. Isoform 5 is expressed preferentially in heart. Isoform 1 is expressed predominantly in kidney and liver.3 Publications

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSMUSG00000017309 Expressed in 71 organ(s), highest expression level in mesenteric lymph node

ExpressionAtlas, Differential and Baseline Expression

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ExpressionAtlasi
Q1ERP8 baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q1ERP8 MM

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
10090.ENSMUSP00000102782

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q1ERP8

Database of comparative protein structure models

More...
ModBasei
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini19 – 120Ig-like V-typeAdd BLAST102

<p>This subsection of the ‘Family and domains’ section provides general information on the biological role of a domain. The term ‘domain’ is intended here in its wide acceptation, it may be a structural domain, a transmembrane region or a functional domain. Several domains are described in this subsection.<p><a href='/help/domain_cc' target='_top'>More...</a></p>Domaini

Ig-like V-type domain mediates binding to lymphocyte.

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the CD300 family.Curated

Keywords - Domaini

Immunoglobulin domain, Signal, Transmembrane, Transmembrane helix

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
ENOG410J03P Eukaryota
ENOG41114KV LUCA

Ensembl GeneTree

More...
GeneTreei
ENSGT00940000162429

InParanoid: Eukaryotic Ortholog Groups

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InParanoidi
Q1ERP8

KEGG Orthology (KO)

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KOi
K16663

Identification of Orthologs from Complete Genome Data

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OMAi
KVHLSHL

Database of Orthologous Groups

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OrthoDBi
1494510at2759

Database for complete collections of gene phylogenies

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PhylomeDBi
Q1ERP8

TreeFam database of animal gene trees

More...
TreeFami
TF334441

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

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Gene3Di
2.60.40.10, 1 hit

Integrated resource of protein families, domains and functional sites

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InterProi
View protein in InterPro
IPR007110 Ig-like_dom
IPR036179 Ig-like_dom_sf
IPR013783 Ig-like_fold
IPR003599 Ig_sub
IPR013106 Ig_V-set

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF07686 V-set, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00409 IG, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF48726 SSF48726, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50835 IG_LIKE, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (5+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is in its mature form or if it represents the precursor.<p><a href='/help/sequence_processing' target='_top'>More...</a></p>Sequence processingi: The displayed sequence is further processed into a mature form.

This entry describes 5 <p>This subsection of the ‘Sequence’ section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket

This entry has 5 described isoforms and 1 potential isoform that is computationally mapped.Show allAlign All

Isoform 1 (identifier: Q1ERP8-1) [UniParc]FASTAAdd to basket
Also known as: isoform C, CD300LG-beta

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MRPLVLLWGC LVLPGYEALK GPKEISGFEG DTVSLRCTYV EKMKEHRKYW
60 70 80 90 100
CRQGGILVSR CGDIVYANQD QEVTRGRMSI RDSPQELSMT VIMRDLTLKD
110 120 130 140 150
SGKYWCGIDR LGRDESFEVT LIVFPGKRDN AVPAGTCCPS SPTPSFQPLT
160 170 180 190 200
PTRSLQPKAK AWQTQLPEPR SSRPVVWLPL TTPQDSRAVA SSVSKPSVSI
210 220 230 240 250
PMVRMMAPVL ILLSLLLAAG LIAFGSHMLR WRKKAWLATE TQKNEKVYLE
260 270 280 290 300
TSLPGNGWTT EDSTIDLAVT PECLRNLNPS AVPSPETQNL SQSTEEEEAA
310 320 330
RSLDDDKEDV MAPPPLQMSA EELAFSEFIS V
Length:331
Mass (Da):36,756
Last modified:July 11, 2006 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i8223E678E7987A8A
GO
Isoform 2 (identifier: Q1ERP8-2) [UniParc]FASTAAdd to basket
Also known as: isoform B, CD300LG-gamma

The sequence of this isoform differs from the canonical sequence as follows:
     126-170: GKRDNAVPAG...AWQTQLPEPR → ASPGLHPTVV...PHTATSPHAG

Show »
Length:371
Mass (Da):40,233
Checksum:i8FF81D6CB4FAC138
GO
Isoform 3 (identifier: Q1ERP8-3) [UniParc]FASTAAdd to basket
Also known as: isoform A, CD300LG-delta

The sequence of this isoform differs from the canonical sequence as follows:
     170-170: R → TSPGLHPTVV...PHTATSPHAG

Show »
Length:415
Mass (Da):44,935
Checksum:i1624955AF917C6A3
GO
Isoform 4 (identifier: Q1ERP8-4) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     126-170: GKRDNAVPAG...AWQTQLPEPR → ASPGLHPTVV...PHTATSPHAG
     197-197: S → R
     198-331: Missing.

Note: No experimental confirmation available.
Show »
Length:237
Mass (Da):25,547
Checksum:iFED8F7690863147A
GO
Isoform 5 (identifier: Q1ERP8-5) [UniParc]FASTAAdd to basket
Also known as: isoform D, CD300LG-alpha

The sequence of this isoform differs from the canonical sequence as follows:
     127-170: Missing.

Show »
Length:287
Mass (Da):31,985
Checksum:iBD7E21D3E8AE38DD
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
X1WI18X1WI18_MOUSE
CMRF35-like molecule 9
Cd300lg
251Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

<p>This subsection of the ‘Sequence’ section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence CAM23248 differs from that shown. Reason: Erroneous gene model prediction.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti172S → Y in BAE96049 (PubMed:16754720).Curated1
Sequence conflicti172S → Y in BAB26251 (PubMed:16876123).Curated1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_028413126 – 170GKRDN…LPEPR → ASPGLHPTVVTAKQGKTGVK APVFTEVAPAWSTGTSQVPP GISPYAGSSPHTATPARSAG TSQVPPGISPYAGRSPHTAT SPHAG in isoform 2 and isoform 4. 3 PublicationsAdd BLAST45
Alternative sequenceiVSP_028414127 – 170Missing in isoform 5. 5 PublicationsAdd BLAST44
Alternative sequenceiVSP_028415170R → TSPGLHPTVVTAKQGKTGVK APVFTEVAPAWSTGTSQVPP GISPYAGSSPHTATPARSAG TSQVPPGISPYAGRSPHTAT SPHAG in isoform 3. 2 Publications1
Alternative sequenceiVSP_028416197S → R in isoform 4. 1 Publication1
Alternative sequenceiVSP_028417198 – 331Missing in isoform 4. 1 PublicationAdd BLAST134

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AY457055 mRNA Translation: AAR27946.1
AB243063 mRNA Translation: BAE96046.1
AB243064 mRNA Translation: BAE96047.1
AB243065 mRNA Translation: BAE96048.1
AB243066 mRNA Translation: BAE96049.1
AK009375 mRNA Translation: BAB26251.1
AK138920 mRNA Translation: BAE23817.1
AK171982 mRNA Translation: BAE42759.1
AL591145 Genomic DNA Translation: CAM23248.1 Sequence problems.
AL591145 Genomic DNA Translation: CAM23249.1
AL591145 Genomic DNA Translation: CAM23250.1
AL591145 Genomic DNA Translation: CAM23251.1
BC116906 mRNA Translation: AAI16907.1
BC119315 mRNA Translation: AAI19316.1

The Consensus CDS (CCDS) project

More...
CCDSi
CCDS25484.1 [Q1ERP8-5]
CCDS48939.1 [Q1ERP8-3]
CCDS48940.1 [Q1ERP8-2]

NCBI Reference Sequences

More...
RefSeqi
NP_001154183.1, NM_001160711.1 [Q1ERP8-3]
NP_001154184.1, NM_001160712.1 [Q1ERP8-1]
NP_001154185.1, NM_001160713.1 [Q1ERP8-2]
NP_082263.2, NM_027987.3 [Q1ERP8-5]

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSMUST00000017453; ENSMUSP00000017453; ENSMUSG00000017309 [Q1ERP8-5]
ENSMUST00000107163; ENSMUSP00000102781; ENSMUSG00000017309 [Q1ERP8-2]
ENSMUST00000107164; ENSMUSP00000102782; ENSMUSG00000017309 [Q1ERP8-3]

Database of genes from NCBI RefSeq genomes

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GeneIDi
52685

KEGG: Kyoto Encyclopedia of Genes and Genomes

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KEGGi
mmu:52685

UCSC genome browser

More...
UCSCi
uc007lqf.2 mouse [Q1ERP8-4]
uc007lqg.2 mouse [Q1ERP8-5]
uc007lqh.2 mouse [Q1ERP8-1]
uc007lqi.2 mouse [Q1ERP8-3]
uc007lqj.2 mouse [Q1ERP8-2]

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY457055 mRNA Translation: AAR27946.1
AB243063 mRNA Translation: BAE96046.1
AB243064 mRNA Translation: BAE96047.1
AB243065 mRNA Translation: BAE96048.1
AB243066 mRNA Translation: BAE96049.1
AK009375 mRNA Translation: BAB26251.1
AK138920 mRNA Translation: BAE23817.1
AK171982 mRNA Translation: BAE42759.1
AL591145 Genomic DNA Translation: CAM23248.1 Sequence problems.
AL591145 Genomic DNA Translation: CAM23249.1
AL591145 Genomic DNA Translation: CAM23250.1
AL591145 Genomic DNA Translation: CAM23251.1
BC116906 mRNA Translation: AAI16907.1
BC119315 mRNA Translation: AAI19316.1
CCDSiCCDS25484.1 [Q1ERP8-5]
CCDS48939.1 [Q1ERP8-3]
CCDS48940.1 [Q1ERP8-2]
RefSeqiNP_001154183.1, NM_001160711.1 [Q1ERP8-3]
NP_001154184.1, NM_001160712.1 [Q1ERP8-1]
NP_001154185.1, NM_001160713.1 [Q1ERP8-2]
NP_082263.2, NM_027987.3 [Q1ERP8-5]

3D structure databases

SMRiQ1ERP8
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000102782

PTM databases

iPTMnetiQ1ERP8
PhosphoSitePlusiQ1ERP8

Proteomic databases

MaxQBiQ1ERP8
PaxDbiQ1ERP8
PeptideAtlasiQ1ERP8
PRIDEiQ1ERP8

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000017453; ENSMUSP00000017453; ENSMUSG00000017309 [Q1ERP8-5]
ENSMUST00000107163; ENSMUSP00000102781; ENSMUSG00000017309 [Q1ERP8-2]
ENSMUST00000107164; ENSMUSP00000102782; ENSMUSG00000017309 [Q1ERP8-3]
GeneIDi52685
KEGGimmu:52685
UCSCiuc007lqf.2 mouse [Q1ERP8-4]
uc007lqg.2 mouse [Q1ERP8-5]
uc007lqh.2 mouse [Q1ERP8-1]
uc007lqi.2 mouse [Q1ERP8-3]
uc007lqj.2 mouse [Q1ERP8-2]

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
146894
MGIiMGI:1289168 Cd300lg

Phylogenomic databases

eggNOGiENOG410J03P Eukaryota
ENOG41114KV LUCA
GeneTreeiENSGT00940000162429
InParanoidiQ1ERP8
KOiK16663
OMAiKVHLSHL
OrthoDBi1494510at2759
PhylomeDBiQ1ERP8
TreeFamiTF334441

Enzyme and pathway databases

ReactomeiR-MMU-198933 Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell

Miscellaneous databases

Protein Ontology

More...
PROi
PR:Q1ERP8

The Stanford Online Universal Resource for Clones and ESTs

More...
SOURCEi
Search...

Gene expression databases

BgeeiENSMUSG00000017309 Expressed in 71 organ(s), highest expression level in mesenteric lymph node
ExpressionAtlasiQ1ERP8 baseline and differential
GenevisibleiQ1ERP8 MM

Family and domain databases

Gene3Di2.60.40.10, 1 hit
InterProiView protein in InterPro
IPR007110 Ig-like_dom
IPR036179 Ig-like_dom_sf
IPR013783 Ig-like_fold
IPR003599 Ig_sub
IPR013106 Ig_V-set
PfamiView protein in Pfam
PF07686 V-set, 1 hit
SMARTiView protein in SMART
SM00409 IG, 1 hit
SUPFAMiSSF48726 SSF48726, 1 hit
PROSITEiView protein in PROSITE
PS50835 IG_LIKE, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

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ProtoNeti
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiCLM9_MOUSE
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q1ERP8
Secondary accession number(s): A2A503
, Q1ERP9, Q1ERQ0, Q3UU12, Q6SJP9, Q9D7B8
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 2, 2007
Last sequence update: July 11, 2006
Last modified: May 8, 2019
This is version 92 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
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