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Entry version 58 (12 Aug 2020)
Sequence version 1 (11 Jul 2006)
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Protein
Submitted name:

PA5017-like protein

Gene
N/A
Organism
Pseudomonas aeruginosa
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
PA5017-like proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiPseudomonas aeruginosaImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri287 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini344 – 414PASInterPro annotationAdd BLAST71
Domaini417 – 469PACInterPro annotationAdd BLAST53
Domaini499 – 631GGDEFInterPro annotationAdd BLAST133
Domaini640 – 894EALInterPro annotationAdd BLAST255

Family and domain databases

Conserved Domains Database

More...
CDDi
cd01948, EAL, 1 hit
cd01949, GGDEF, 1 hit
cd00130, PAS, 1 hit

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
3.20.20.450, 1 hit
3.30.450.40, 1 hit
3.30.70.270, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR001633, EAL_dom
IPR035919, EAL_sf
IPR003018, GAF
IPR029016, GAF-like_dom_sf
IPR000160, GGDEF_dom
IPR029787, Nucleotide_cyclase
IPR001610, PAC
IPR000014, PAS
IPR000700, PAS-assoc_C
IPR035965, PAS-like_dom_sf
IPR043128, Rev_trsase/Diguanyl_cyclase

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF00563, EAL, 1 hit
PF01590, GAF, 1 hit
PF00990, GGDEF, 1 hit
PF13426, PAS_9, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

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SMARTi
View protein in SMART
SM00052, EAL, 1 hit
SM00065, GAF, 1 hit
SM00267, GGDEF, 1 hit
SM00086, PAC, 1 hit
SM00091, PAS, 2 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF141868, SSF141868, 1 hit
SSF55073, SSF55073, 1 hit
SSF55785, SSF55785, 1 hit

TIGRFAMs; a protein family database

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TIGRFAMsi
TIGR00254, GGDEF, 1 hit
TIGR00229, sensory_box, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50883, EAL, 1 hit
PS50887, GGDEF, 1 hit
PS50113, PAC, 1 hit
PS50112, PAS, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

Q1AHB3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MKSHPDAASR SAAEVVTQLP VPSRLGLLRF ERLNEPSWAL LFLDPACERQ
60 70 80 90 100
LGLPATTLCA LLDAPYASLM EPEARHRLHE QIQQQLVKRP HYQVSYKLHT
110 120 130 140 150
PNGVLTMLEF GEAFQQHGRQ LLHGYLMVEE RPESAERSEQ LLDLESQNLR
160 170 180 190 200
LKASLDLYQR SQDDHLQHLL RSRTQQNLIV RLARHRYLSS DPLLEAAQLI
210 220 230 240 250
TQATCEAYGT ARAGIWRLLD DQRLEAVTVY RRDLDQYEKP QSIDASRYPA
260 270 280 290 300
YLEAVHSGRA IDAHNAQRDP RTQELYKDYL KPLGVNALLD ATIRIGGEVV
310 320 330 340 350
GVLCLEHAGE NRMWRGDEIA FAGELADQYA QVLMNHERRN VSSALHLFQR
360 370 380 390 400
AVEQSASAFL LIDRDGVVEY VNPSFTSITQ YSADEVRNRR LSELPALENL
410 420 430 440 450
SELLFDARSA LTQQNSWQGE FRSRRKNHEP YWGQLSLSKV YDDLGELTHY
460 470 480 490 500
IGIYEDITQN KLAQQHIEKL AYRDNLTGLA NRHYFIGALE ERLESSGDRP
510 520 530 540 550
LSLLLVDIDN FKRINDSLGH QTGDKLLVSL ARRLRSCLGD GATLARFASN
560 570 580 590 600
EFAVLLDDTA VEKGESIAAQ VLHMLDKPLF VDNQLINITG SIGLASAPQH
610 620 630 640 650
GCDPQTLMKY AGLALHKAKA NGKHQVQVFT EALTAEASYK LFVESNLRRA
660 670 680 690 700
LAQNELAVHY QPKLCLRSGQ LLGLEALLRW QHPEKGMIRP DRFISVAEET
710 720 730 740 750
GLIVPIGKWV IREACRQARE LAEAGLGELQ IAINLSPKQF TDPDLVGSIA
760 770 780 790 800
AILHEENIPA SQLELELTES LLLDATDDTR QQLERLKSLG LTLAMDDFGT
810 820 830 840 850
GYSSLSYLKK FPIDVIKIDR SFIKDIPDSQ DDMEITSAVI AMAHNLKLKV
860 870 880 890
VAEGVESAEQ LAFLRRNRCD IGQGYLFDRP IPSDLLNTSL LRYPCRTLH
Length:899
Mass (Da):101,348
Last modified:July 11, 2006 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i1E543D7315DE01E3
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

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DDBJi
Links Updated
DQ098947 Genomic DNA Translation: AAZ77792.1

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DQ098947 Genomic DNA Translation: AAZ77792.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

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SWISS-MODEL-Workspacei
Submit a new modelling project...

Family and domain databases

CDDicd01948, EAL, 1 hit
cd01949, GGDEF, 1 hit
cd00130, PAS, 1 hit
Gene3Di3.20.20.450, 1 hit
3.30.450.40, 1 hit
3.30.70.270, 1 hit
InterProiView protein in InterPro
IPR001633, EAL_dom
IPR035919, EAL_sf
IPR003018, GAF
IPR029016, GAF-like_dom_sf
IPR000160, GGDEF_dom
IPR029787, Nucleotide_cyclase
IPR001610, PAC
IPR000014, PAS
IPR000700, PAS-assoc_C
IPR035965, PAS-like_dom_sf
IPR043128, Rev_trsase/Diguanyl_cyclase
PfamiView protein in Pfam
PF00563, EAL, 1 hit
PF01590, GAF, 1 hit
PF00990, GGDEF, 1 hit
PF13426, PAS_9, 1 hit
SMARTiView protein in SMART
SM00052, EAL, 1 hit
SM00065, GAF, 1 hit
SM00267, GGDEF, 1 hit
SM00086, PAC, 1 hit
SM00091, PAS, 2 hits
SUPFAMiSSF141868, SSF141868, 1 hit
SSF55073, SSF55073, 1 hit
SSF55785, SSF55785, 1 hit
TIGRFAMsiTIGR00254, GGDEF, 1 hit
TIGR00229, sensory_box, 1 hit
PROSITEiView protein in PROSITE
PS50883, EAL, 1 hit
PS50887, GGDEF, 1 hit
PS50113, PAC, 1 hit
PS50112, PAS, 1 hit

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiQ1AHB3_PSEAI
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q1AHB3
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: July 11, 2006
Last sequence update: July 11, 2006
Last modified: August 12, 2020
This is version 58 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)
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