Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

60S ribosomal protein L26

Gene

rpl-26

Organism
Caenorhabditis elegans
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

  • RNA binding Source: GO_Central
  • structural constituent of ribosome Source: GO_Central

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-CEL-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-CEL-1799339 SRP-dependent cotranslational protein targeting to membrane
R-CEL-72689 Formation of a pool of free 40S subunits
R-CEL-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-CEL-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-CEL-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L26
Gene namesi
Name:rpl-26
ORF Names:F28C6.7
OrganismiCaenorhabditis elegans
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditinaRhabditomorphaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome II

Organism-specific databases

WormBaseiF28C6.7a ; CE03278 ; WBGene00004440 ; rpl-26
F28C6.7b ; CE20731 ; WBGene00004440 ; rpl-26
F28C6.7c ; CE32883 ; WBGene00004440 ; rpl-26

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001307951 – 14260S ribosomal protein L26Add BLAST142

Proteomic databases

EPDiQ19869
PaxDbiQ19869
PeptideAtlasiQ19869
PRIDEiQ19869

PTM databases

iPTMnetiQ19869

Expressioni

Gene expression databases

BgeeiWBGene00004440 Expressed in 5 organ(s), highest expression level in multi-cellular organism

Interactioni

Protein-protein interaction databases

BioGridi39707, 1 interactor
STRINGi6239.F28C6.7a.2

Structurei

3D structure databases

ProteinModelPortaliQ19869
SMRiQ19869
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG3401 Eukaryota
COG0198 LUCA
GeneTreeiENSGT00390000014165
HOGENOMiHOG000216571
InParanoidiQ19869
KOiK02898
OMAiVRIMRGD
OrthoDBiEOG091G0TZX
PhylomeDBiQ19869

Family and domain databases

Gene3Di2.30.30.30, 1 hit
HAMAPiMF_01326_A Ribosomal_L24_A, 1 hit
InterProiView protein in InterPro
IPR005824 KOW
IPR014722 Rib_L2_dom2
IPR005825 Ribosomal_L24/26_CS
IPR005756 Ribosomal_L26/L24P_euk/arc
IPR008991 Translation_prot_SH3-like_sf
PANTHERiPTHR11143 PTHR11143, 1 hit
PfamiView protein in Pfam
PF00467 KOW, 1 hit
PF16906 Ribosomal_L26, 1 hit
SMARTiView protein in SMART
SM00739 KOW, 1 hit
SUPFAMiSSF50104 SSF50104, 1 hit
TIGRFAMsiTIGR01080 rplX_A_E, 1 hit
PROSITEiView protein in PROSITE
PS01108 RIBOSOMAL_L24, 1 hit

Sequences (3)i

Sequence statusi: Complete.

This entry describes 3 isoformsi produced by alternative splicing. AlignAdd to basket
Isoform a (identifier: Q19869-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MKVNPFVSSD SGKSRKAHFN APSHERRRIM SAPLTKELRT KHGIRAIPIR
60 70 80 90 100
TDDEVVVMRG RHKGNTGRVL RCYRKKFVIH IDKITREKAN GSTVHIGIHP
110 120 130 140
SKVAITKLKL DKDRRALVER KAAGRSRVTG ILKGKHTDET VN
Note: No experimental confirmation available.
Length:142
Mass (Da):16,075
Last modified:November 1, 1997 - v1
Checksum:iB496362F0BFEC354
GO
Isoform b (identifier: Q19869-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     104-142: AITKLKLDKDRRALVERKAAGRSRVTGILKGKHTDETVN → RFV

Note: No experimental confirmation available.
Show »
Length:106
Mass (Da):12,149
Checksum:iBFC2D533D71991EA
GO
Isoform c (identifier: Q19869-3) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     104-142: AITKLKLDKDRRALVERKAAGRSRVTGILKGKHTDETVN → RSLSPS

Note: No experimental confirmation available.
Show »
Length:109
Mass (Da):12,374
Checksum:i6255499A3EA533D7
GO

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Alternative sequenceiVSP_020728104 – 142AITKL…DETVN → RFV in isoform b. CuratedAdd BLAST39
Alternative sequenceiVSP_020727104 – 142AITKL…DETVN → RSLSPS in isoform c. CuratedAdd BLAST39

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z68315 Genomic DNA Translation: CAA92674.1
Z68315 Genomic DNA Translation: CAA92678.1
Z68315 Genomic DNA Translation: CAD59149.1
PIRiT21486
T21490
RefSeqiNP_495823.1, NM_063422.4 [Q19869-1]
NP_495824.1, NM_063423.6 [Q19869-2]
NP_871965.1, NM_182165.5 [Q19869-3]
UniGeneiCel.18248

Genome annotation databases

EnsemblMetazoaiF28C6.7a; F28C6.7a; WBGene00004440 [Q19869-1]
F28C6.7b; F28C6.7b; WBGene00004440 [Q19869-2]
F28C6.7c; F28C6.7c; WBGene00004440 [Q19869-3]
GeneIDi174379
KEGGicel:CELE_F28C6.7
UCSCiF28C6.7a.1 c. elegans [Q19869-1]

Keywords - Coding sequence diversityi

Alternative splicing

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z68315 Genomic DNA Translation: CAA92674.1
Z68315 Genomic DNA Translation: CAA92678.1
Z68315 Genomic DNA Translation: CAD59149.1
PIRiT21486
T21490
RefSeqiNP_495823.1, NM_063422.4 [Q19869-1]
NP_495824.1, NM_063423.6 [Q19869-2]
NP_871965.1, NM_182165.5 [Q19869-3]
UniGeneiCel.18248

3D structure databases

ProteinModelPortaliQ19869
SMRiQ19869
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi39707, 1 interactor
STRINGi6239.F28C6.7a.2

PTM databases

iPTMnetiQ19869

Proteomic databases

EPDiQ19869
PaxDbiQ19869
PeptideAtlasiQ19869
PRIDEiQ19869

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiF28C6.7a; F28C6.7a; WBGene00004440 [Q19869-1]
F28C6.7b; F28C6.7b; WBGene00004440 [Q19869-2]
F28C6.7c; F28C6.7c; WBGene00004440 [Q19869-3]
GeneIDi174379
KEGGicel:CELE_F28C6.7
UCSCiF28C6.7a.1 c. elegans [Q19869-1]

Organism-specific databases

CTDi174379
WormBaseiF28C6.7a ; CE03278 ; WBGene00004440 ; rpl-26
F28C6.7b ; CE20731 ; WBGene00004440 ; rpl-26
F28C6.7c ; CE32883 ; WBGene00004440 ; rpl-26

Phylogenomic databases

eggNOGiKOG3401 Eukaryota
COG0198 LUCA
GeneTreeiENSGT00390000014165
HOGENOMiHOG000216571
InParanoidiQ19869
KOiK02898
OMAiVRIMRGD
OrthoDBiEOG091G0TZX
PhylomeDBiQ19869

Enzyme and pathway databases

ReactomeiR-CEL-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-CEL-1799339 SRP-dependent cotranslational protein targeting to membrane
R-CEL-72689 Formation of a pool of free 40S subunits
R-CEL-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-CEL-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-CEL-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Miscellaneous databases

PROiPR:Q19869

Gene expression databases

BgeeiWBGene00004440 Expressed in 5 organ(s), highest expression level in multi-cellular organism

Family and domain databases

Gene3Di2.30.30.30, 1 hit
HAMAPiMF_01326_A Ribosomal_L24_A, 1 hit
InterProiView protein in InterPro
IPR005824 KOW
IPR014722 Rib_L2_dom2
IPR005825 Ribosomal_L24/26_CS
IPR005756 Ribosomal_L26/L24P_euk/arc
IPR008991 Translation_prot_SH3-like_sf
PANTHERiPTHR11143 PTHR11143, 1 hit
PfamiView protein in Pfam
PF00467 KOW, 1 hit
PF16906 Ribosomal_L26, 1 hit
SMARTiView protein in SMART
SM00739 KOW, 1 hit
SUPFAMiSSF50104 SSF50104, 1 hit
TIGRFAMsiTIGR01080 rplX_A_E, 1 hit
PROSITEiView protein in PROSITE
PS01108 RIBOSOMAL_L24, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiRL26_CAEEL
AccessioniPrimary (citable) accession number: Q19869
Secondary accession number(s): Q8I121, Q9U3H7
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: November 7, 2018
This is version 121 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. Caenorhabditis elegans
    Caenorhabditis elegans: entries, gene names and cross-references to WormBase
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again