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UniProtKB - Q19368 (Q19368_CAEEL)
Protein
Submitted name:
COLlagen
Gene
col-128
Organism
Caenorhabditis elegans
Status
Functioni
GO - Molecular functioni
- extracellular matrix structural constituent Source: GO_Central
GO - Biological processi
- anatomical structure development Source: UniProt
- extracellular matrix organization Source: GO_Central
Names & Taxonomyi
Protein namesi | Submitted name: COLlagenImported |
Gene namesi | Name:col-128Imported ORF Names:CELE_F12F6.9Imported, F12F6.9Imported |
Organismi | Caenorhabditis elegansImported |
Taxonomic identifieri | 6239 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Ecdysozoa › Nematoda › Chromadorea › Rhabditida › Rhabditina › Rhabditomorpha › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis |
Proteomesi |
|
Organism-specific databases
WormBasei | F12F6.9 ; CE05597 ; WBGene00000702 ; col-128 |
Subcellular locationi
Extracellular region or secreted
- extracellular space Source: GO_Central
Other locations
- collagen trimer Source: UniProtKB-KW
- extracellular matrix Source: GO_Central
- integral component of membrane Source: UniProtKB-KW
Topology
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Transmembranei | 6 – 29 | HelicalSequence analysisAdd BLAST | 24 |
Keywords - Cellular componenti
MembraneExpressioni
Gene expression databases
Bgeei | WBGene00000702, Expressed in multi-cellular organism and 3 other tissues |
Structurei
3D structure databases
AlphaFoldDBi | Q19368 |
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Family & Domainsi
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 76 – 101 | DisorderedSequence analysisAdd BLAST | 26 | |
Regioni | 118 – 253 | DisorderedSequence analysisAdd BLAST | 136 | |
Regioni | 267 – 310 | DisorderedSequence analysisAdd BLAST | 44 | |
Regioni | 386 – 414 | DisorderedSequence analysisAdd BLAST | 29 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 274 – 310 | Polar residuesSequence analysisAdd BLAST | 37 | |
Compositional biasi | 386 – 401 | Basic and acidic residuesSequence analysisAdd BLAST | 16 |
Sequence similaritiesi
Belongs to the cuticular collagen family.ARBA annotation
Keywords - Domaini
CollagenImported, RepeatARBA annotation, Transmembrane, Transmembrane helixSequence analysisPhylogenomic databases
eggNOGi | KOG3544, Eukaryota |
HOGENOMi | CLU_053025_0_0_1 |
InParanoidi | Q19368 |
OMAi | HSKSVRP |
OrthoDBi | 1319728at2759 |
PhylomeDBi | Q19368 |
Family and domain databases
InterProi | View protein in InterPro IPR008160, Collagen |
Pfami | View protein in Pfam PF01391, Collagen, 1 hit |
i Sequence
Sequence statusi: Complete.
Q19368-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MWLYTLAALS ISFSCLLIIV QVIYFPYLIS QAESAHGIVM SKIESFKNLE
60 70 80 90 100
SEITRELSDF TFLHVARKRE IISCEPGYPG LPGSNGRDGQ AGNDGPNGIR
110 120 130 140 150
GLDARDIMEE IQANQECITC PQGERGPTGA PGDRGETGDK GDKGVAGIPG
160 170 180 190 200
QDGLDGEQGE EGPVGPSGPP GRRGRKGADG KSAMGGFGSP GPKGVPGAKG
210 220 230 240 250
GSGLQGPRGK RNYIYGPPGP MGQPGPSGLD GVSGNPGERG PKGPPGDRGA
260 270 280 290 300
DIKFCPCPLE LELLKGKHSK SVRPSPPASP SSTSQPTTSA TTTSEPLSPS
310 320 330 340 350
TTIVTDAPEL VTTETSTEDL AVMEDITATT TMETITFASQ DLGKEEIREP
360 370 380 390 400
ENVFGRAPGA ETGPQGGNEI EVLNYDDEEI RTIELPKEYE HEETRGPIIT
410 420
EEEDDYPEET TTTRRFRYVT KRPIRFE
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | BX284604 Genomic DNA Translation: CAA97787.1 |
PIRi | T20800 |
RefSeqi | NP_502175.1, NM_069774.5 |
Genome annotation databases
EnsemblMetazoai | F12F6.9.1; F12F6.9.1; WBGene00000702 |
GeneIDi | 178076 |
KEGGi | cel:CELE_F12F6.9 |
UCSCi | F12F6.9, c. elegans |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | BX284604 Genomic DNA Translation: CAA97787.1 |
PIRi | T20800 |
RefSeqi | NP_502175.1, NM_069774.5 |
3D structure databases
AlphaFoldDBi | Q19368 |
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
STRINGi | 6239.F12F6.9 |
Proteomic databases
PaxDbi | Q19368 |
Genome annotation databases
EnsemblMetazoai | F12F6.9.1; F12F6.9.1; WBGene00000702 |
GeneIDi | 178076 |
KEGGi | cel:CELE_F12F6.9 |
UCSCi | F12F6.9, c. elegans |
Organism-specific databases
CTDi | 178076 |
WormBasei | F12F6.9 ; CE05597 ; WBGene00000702 ; col-128 |
Phylogenomic databases
eggNOGi | KOG3544, Eukaryota |
HOGENOMi | CLU_053025_0_0_1 |
InParanoidi | Q19368 |
OMAi | HSKSVRP |
OrthoDBi | 1319728at2759 |
PhylomeDBi | Q19368 |
Gene expression databases
Bgeei | WBGene00000702, Expressed in multi-cellular organism and 3 other tissues |
Family and domain databases
InterProi | View protein in InterPro IPR008160, Collagen |
Pfami | View protein in Pfam PF01391, Collagen, 1 hit |
MobiDBi | Search... |
Entry informationi
Entry namei | Q19368_CAEEL | |
Accessioni | Q19368Primary (citable) accession number: Q19368 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | November 1, 1996 |
Last sequence update: | November 1, 1996 | |
Last modified: | May 25, 2022 | |
This is version 141 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |