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Protein
Submitted name:

SCP-Like extracellular protein

Gene

scl-8

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
SCP-Like extracellular proteinImported
Gene namesi
Name:scl-8Imported
ORF Names:C39E9.6Imported, CELE_C39E9.6Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome IV

Organism-specific databases

WormBaseiC39E9.6 ; CE05389 ; WBGene00008030 ; scl-8

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 16Sequence analysisAdd BLAST16
ChainiPRO_500418684917 – 210Sequence analysisAdd BLAST194

Proteomic databases

PaxDbiQ18540
PeptideAtlasiQ18540

Expressioni

Gene expression databases

BgeeiWBGene00008030

Interactioni

Protein-protein interaction databases

STRINGi6239.C39E9.6

Structurei

3D structure databases

ProteinModelPortaliQ18540
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini21 – 183SCPInterPro annotationAdd BLAST163

Sequence similaritiesi

Belongs to the CRISP family.SAAS annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiKOG3017 Eukaryota
COG2340 LUCA
GeneTreeiENSGT00900000141278
HOGENOMiHOG000036879
InParanoidiQ18540
OMAiEQSTGLC
OrthoDBiEOG091G048D
PhylomeDBiQ18540

Family and domain databases

Gene3Di3.40.33.10, 1 hit
InterProiView protein in InterPro
IPR001283 Allrgn_V5/Tpx1
IPR014044 CAP_domain
IPR035940 CAP_sf
IPR002413 V5_allergen
PANTHERiPTHR10334 PTHR10334, 1 hit
PfamiView protein in Pfam
PF00188 CAP, 1 hit
PRINTSiPR00838 V5ALLERGEN
PR00837 V5TPXLIKE
SMARTiView protein in SMART
SM00198 SCP, 1 hit
SUPFAMiSSF55797 SSF55797, 1 hit

Sequencei

Sequence statusi: Complete.

Q18540-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRTLLVLAVA CVGVYAQFSE GGKQSILNAH NDIRSRIAKG NYVAKGNRKE
60 70 80 90 100
SATNMLKMKW DSSLEQSAQN YANGCHMQHS TNDKTIGENL YWEWSGDPFS
110 120 130 140 150
DLDKFGKIAT VAWDHEFEQF GWNSNKFSLA LFNTGVAHAT QIAWAPTGKI
160 170 180 190 200
GCGVKNCGRD ARRGGLFQVA IVCQYRVRGN FFFKNIYNSG ATCSACPAGT
210
SCEQSTGLCA
Length:210
Mass (Da):23,030
Last modified:November 1, 1996 - v1
Checksum:i06AEA89CD24D0E2F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284604 Genomic DNA Translation: CAA94332.1
PIRiT19849
RefSeqiNP_502510.1, NM_070109.1
UniGeneiCel.13367

Genome annotation databases

EnsemblMetazoaiC39E9.6; C39E9.6; WBGene00008030
GeneIDi183345
KEGGicel:CELE_C39E9.6
UCSCiC39E9.6 c. elegans

Similar proteinsi

Entry informationi

Entry nameiQ18540_CAEEL
AccessioniPrimary (citable) accession number: Q18540
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: July 18, 2018
This is version 110 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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