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Entry version 163 (12 Aug 2020)
Sequence version 1 (01 Nov 1996)
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Protein

TATA box-binding protein-associated factor RNA polymerase I subunit A

Gene

TAF1A

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Component of the transcription factor SL1/TIF-IB complex, which is involved in the assembly of the PIC (pre-initiation complex) during RNA polymerase I-dependent transcription. The rate of PIC formation probably is primarily dependent on the rate of association of SL1/TIF-IB with the rDNA promoter. SL1/TIF-IB is involved in stabilization of nucleolar transcription factor 1/UBTF on rDNA. Formation of SL1/TIF-IB excludes the association of TBP with TFIID subunits.2 Publications

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation

Enzyme and pathway databases

Pathway Commons web resource for biological pathway data

More...
PathwayCommonsi
Q15573

Reactome - a knowledgebase of biological pathways and processes

More...
Reactomei
R-HSA-427359, SIRT1 negatively regulates rRNA expression
R-HSA-427413, NoRC negatively regulates rRNA expression
R-HSA-5250924, B-WICH complex positively regulates rRNA expression
R-HSA-73762, RNA Polymerase I Transcription Initiation
R-HSA-73772, RNA Polymerase I Promoter Escape
R-HSA-73863, RNA Polymerase I Transcription Termination

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
TATA box-binding protein-associated factor RNA polymerase I subunit A
Alternative name(s):
RNA polymerase I-specific TBP-associated factor 48 kDa
Short name:
TAFI48
TATA box-binding protein-associated factor 1A
Short name:
TBP-associated factor 1A
Transcription factor SL1
Transcription initiation factor SL1/TIF-IB subunit A
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:TAF1A
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiHomo sapiens (Human)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri9606 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000005640 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 1

Organism-specific databases

Eukaryotic Pathogen Database Resources

More...
EuPathDBi
HostDB:ENSG00000143498.17

Human Gene Nomenclature Database

More...
HGNCi
HGNC:11532, TAF1A

Online Mendelian Inheritance in Man (OMIM)

More...
MIMi
604903, gene

neXtProt; the human protein knowledge platform

More...
neXtProti
NX_Q15573

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

Organism-specific databases

DisGeNET

More...
DisGeNETi
9015

MalaCards human disease database

More...
MalaCardsi
TAF1A

Open Targets

More...
OpenTargetsi
ENSG00000143498

Orphanet; a database dedicated to information on rare diseases and orphan drugs

More...
Orphaneti
154, Familial isolated dilated cardiomyopathy

The Pharmacogenetics and Pharmacogenomics Knowledge Base

More...
PharmGKBi
PA36307

Miscellaneous databases

Pharos NIH Druggable Genome Knowledgebase

More...
Pharosi
Q15573, Tbio

Chemistry databases

ChEMBL database of bioactive drug-like small molecules

More...
ChEMBLi
CHEMBL4105882

Polymorphism and mutation databases

BioMuta curated single-nucleotide variation and disease association database

More...
BioMutai
TAF1A

Domain mapping of disease mutations (DMDM)

More...
DMDMi
74739864

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00002279871 – 450TATA box-binding protein-associated factor RNA polymerase I subunit AAdd BLAST450

Proteomic databases

Encyclopedia of Proteome Dynamics

More...
EPDi
Q15573

MassIVE - Mass Spectrometry Interactive Virtual Environment

More...
MassIVEi
Q15573

MaxQB - The MaxQuant DataBase

More...
MaxQBi
Q15573

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q15573

PeptideAtlas

More...
PeptideAtlasi
Q15573

PRoteomics IDEntifications database

More...
PRIDEi
Q15573

ProteomicsDB: a multi-organism proteome resource

More...
ProteomicsDBi
60643 [Q15573-1]
60644 [Q15573-2]

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q15573

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...
PhosphoSitePlusi
Q15573

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSG00000143498, Expressed in oocyte and 182 other tissues

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
Q15573, baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q15573, HS

Organism-specific databases

Human Protein Atlas

More...
HPAi
ENSG00000143498, Low tissue specificity

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction%5Fsection">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function%5Fsection">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Component of the transcription factor SL1/TIF-IB complex, composed of TBP and at least TAF1A, TAF1B, TAF1C and TAF1D. In the complex interacts directly with TBP, TAF1A and TAF1B. Interaction of the SL1/TIF-IB subunits with TBP excludes interaction of TBP with the transcription factor IID (TFIID) subunits.

Interacts with UBFT.

Interacts with CEBPA (isoform 1 and isoform 4) (PubMed:20075868).

3 Publications

<p>This subsection of the '<a href="http://www.uniprot.org/help/interaction%5Fsection">Interaction</a>' section provides information about binary protein-protein interactions. The data presented in this section are a quality-filtered subset of binary interactions automatically derived from the <a href="https://www.ebi.ac.uk/intact/">IntAct database</a>. It is updated at every <a href="http://www.uniprot.org/help/synchronization">UniProt release</a>.<p><a href='/help/binary_interactions' target='_top'>More...</a></p>Binary interactionsi

Hide details

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGRID)

More...
BioGRIDi
114484, 44 interactors

CORUM comprehensive resource of mammalian protein complexes

More...
CORUMi
Q15573

Protein interaction database and analysis system

More...
IntActi
Q15573, 19 interactors

Molecular INTeraction database

More...
MINTi
Q15573

STRING: functional protein association networks

More...
STRINGi
9606.ENSP00000339976

Miscellaneous databases

RNAct, Protein-RNA interaction predictions for model organisms.

More...
RNActi
Q15573, protein

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q15573

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
ENOG502R510, Eukaryota

Ensembl GeneTree

More...
GeneTreei
ENSGT00390000011405

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_049461_0_0_1

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q15573

KEGG Orthology (KO)

More...
KOi
K15212

Identification of Orthologs from Complete Genome Data

More...
OMAi
WQEAAEY

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q15573

TreeFam database of animal gene trees

More...
TreeFami
TF330958

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR016629, RNA_pol_I_TAF1A/TAFI48
IPR039495, TAF1A-like

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF14929, TAF1_subA, 1 hit

PIRSF; a whole-protein classification database

More...
PIRSFi
PIRSF015161, TAFI48, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (2+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 2 <p>This subsection of the 'Sequence' section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform. This section is only present in reviewed entries, i.e. in UniProtKB/Swiss-Prot.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket

This entry has 2 described isoforms and 1 potential isoform that is computationally mapped.Show allAlign All

Isoform 1 (identifier: Q15573-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MSDFSEELKG PVTDDEEVET SVLSGAGMHF PWLQTYVETV AIGGKRRKDF
60 70 80 90 100
AQTTSACLSF IQEALLKHQW QQAAEYMYSY FQTLEDSDSY KRQAAPEIIW
110 120 130 140 150
KLGSEILFYH PKSNMESFNT FANRMKNIGV MNYLKISLQH ALYLLHHGML
160 170 180 190 200
KDAKRNLSEA ETWRHGENTS SREILINLIQ AYKGLLQYYT WSEKKMELSK
210 220 230 240 250
LDKDDYAYNA VAQDVFNHSW KTSANISALI KIPGVWDPFV KSYVEMLEFY
260 270 280 290 300
GDRDGAQEVL TNYAYDEKFP SNPNAHIYLY NFLKRQKAPR SKLISVLKIL
310 320 330 340 350
YQIVPSHKLM LEFHTLLRKS EKEEHRKLGL EVLFGVLDFA GCTKNITAWK
360 370 380 390 400
YLAKYLKNIL MGNHLAWVQE EWNSRKNWWP GFHFSYFWAK SDWKEDTALA
410 420 430 440 450
CEKAFVAGLL LGKGCRYFRY ILKQDHQILG KKIKRMKRSV KKYSIVNPRL
Length:450
Mass (Da):52,676
Last modified:November 1, 1996 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i130330D78493C4D8
GO
Isoform 2 (identifier: Q15573-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-114: Missing.

Show »
Length:336
Mass (Da):39,615
Checksum:i16966A610BFC1078
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q5JRA7Q5JRA7_HUMAN
TATA box-binding protein-associated...
TAF1A
286Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Natural variant

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section describes natural variant(s) of the protein sequence.<p><a href='/help/variant' target='_top'>More...</a></p>Natural variantiVAR_05225398I → M. Corresponds to variant dbSNP:rs17163271Ensembl.1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_0176351 – 114Missing in isoform 2. 1 PublicationAdd BLAST114

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
L39060 mRNA Translation: AAA62862.1
AK001054 mRNA Translation: BAA91482.1
AK315740 mRNA Translation: BAG38095.1
AL592148 Genomic DNA No translation available.
CH471100 Genomic DNA Translation: EAW93271.1
CH471100 Genomic DNA Translation: EAW93272.1
BC013808 mRNA Translation: AAH13808.1

The Consensus CDS (CCDS) project

More...
CCDSi
CCDS1531.1 [Q15573-1]
CCDS1532.1 [Q15573-2]

Protein sequence database of the Protein Information Resource

More...
PIRi
I61580

NCBI Reference Sequences

More...
RefSeqi
NP_001188465.1, NM_001201536.1 [Q15573-1]
NP_005672.1, NM_005681.3 [Q15573-1]
NP_647603.1, NM_139352.2 [Q15573-2]
XP_006711676.1, XM_006711613.3 [Q15573-2]
XP_016858248.1, XM_017002759.1 [Q15573-2]
XP_016858249.1, XM_017002760.1 [Q15573-2]

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENST00000350027; ENSP00000339976; ENSG00000143498 [Q15573-1]
ENST00000352967; ENSP00000327072; ENSG00000143498 [Q15573-1]
ENST00000366890; ENSP00000355856; ENSG00000143498 [Q15573-2]

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
9015

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
hsa:9015

UCSC genome browser

More...
UCSCi
uc001hni.3, human [Q15573-1]

Keywords - Coding sequence diversityi

Alternative splicing, Polymorphism

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L39060 mRNA Translation: AAA62862.1
AK001054 mRNA Translation: BAA91482.1
AK315740 mRNA Translation: BAG38095.1
AL592148 Genomic DNA No translation available.
CH471100 Genomic DNA Translation: EAW93271.1
CH471100 Genomic DNA Translation: EAW93272.1
BC013808 mRNA Translation: AAH13808.1
CCDSiCCDS1531.1 [Q15573-1]
CCDS1532.1 [Q15573-2]
PIRiI61580
RefSeqiNP_001188465.1, NM_001201536.1 [Q15573-1]
NP_005672.1, NM_005681.3 [Q15573-1]
NP_647603.1, NM_139352.2 [Q15573-2]
XP_006711676.1, XM_006711613.3 [Q15573-2]
XP_016858248.1, XM_017002759.1 [Q15573-2]
XP_016858249.1, XM_017002760.1 [Q15573-2]

3D structure databases

SMRiQ15573
ModBaseiSearch...

Protein-protein interaction databases

BioGRIDi114484, 44 interactors
CORUMiQ15573
IntActiQ15573, 19 interactors
MINTiQ15573
STRINGi9606.ENSP00000339976

Chemistry databases

ChEMBLiCHEMBL4105882

PTM databases

iPTMnetiQ15573
PhosphoSitePlusiQ15573

Polymorphism and mutation databases

BioMutaiTAF1A
DMDMi74739864

Proteomic databases

EPDiQ15573
MassIVEiQ15573
MaxQBiQ15573
PaxDbiQ15573
PeptideAtlasiQ15573
PRIDEiQ15573
ProteomicsDBi60643 [Q15573-1]
60644 [Q15573-2]

Protocols and materials databases

Antibodypedia a portal for validated antibodies

More...
Antibodypediai
20741, 218 antibodies

The DNASU plasmid repository

More...
DNASUi
9015

Genome annotation databases

EnsembliENST00000350027; ENSP00000339976; ENSG00000143498 [Q15573-1]
ENST00000352967; ENSP00000327072; ENSG00000143498 [Q15573-1]
ENST00000366890; ENSP00000355856; ENSG00000143498 [Q15573-2]
GeneIDi9015
KEGGihsa:9015
UCSCiuc001hni.3, human [Q15573-1]

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
9015
DisGeNETi9015
EuPathDBiHostDB:ENSG00000143498.17

GeneCards: human genes, protein and diseases

More...
GeneCardsi
TAF1A
HGNCiHGNC:11532, TAF1A
HPAiENSG00000143498, Low tissue specificity
MalaCardsiTAF1A
MIMi604903, gene
neXtProtiNX_Q15573
OpenTargetsiENSG00000143498
Orphaneti154, Familial isolated dilated cardiomyopathy
PharmGKBiPA36307

GenAtlas: human gene database

More...
GenAtlasi
Search...

Phylogenomic databases

eggNOGiENOG502R510, Eukaryota
GeneTreeiENSGT00390000011405
HOGENOMiCLU_049461_0_0_1
InParanoidiQ15573
KOiK15212
OMAiWQEAAEY
PhylomeDBiQ15573
TreeFamiTF330958

Enzyme and pathway databases

PathwayCommonsiQ15573
ReactomeiR-HSA-427359, SIRT1 negatively regulates rRNA expression
R-HSA-427413, NoRC negatively regulates rRNA expression
R-HSA-5250924, B-WICH complex positively regulates rRNA expression
R-HSA-73762, RNA Polymerase I Transcription Initiation
R-HSA-73772, RNA Polymerase I Promoter Escape
R-HSA-73863, RNA Polymerase I Transcription Termination

Miscellaneous databases

BioGRID ORCS database of CRISPR phenotype screens

More...
BioGRID-ORCSi
9015, 420 hits in 878 CRISPR screens

The Gene Wiki collection of pages on human genes and proteins

More...
GeneWikii
TAF1A

Database of phenotypes from RNA interference screens in Drosophila and Homo sapiens

More...
GenomeRNAii
9015
PharosiQ15573, Tbio

Protein Ontology

More...
PROi
PR:Q15573
RNActiQ15573, protein

The Stanford Online Universal Resource for Clones and ESTs

More...
SOURCEi
Search...

Gene expression databases

BgeeiENSG00000143498, Expressed in oocyte and 182 other tissues
ExpressionAtlasiQ15573, baseline and differential
GenevisibleiQ15573, HS

Family and domain databases

InterProiView protein in InterPro
IPR016629, RNA_pol_I_TAF1A/TAFI48
IPR039495, TAF1A-like
PfamiView protein in Pfam
PF14929, TAF1_subA, 1 hit
PIRSFiPIRSF015161, TAFI48, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

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ProtoNeti
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MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiTAF1A_HUMAN
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q15573
Secondary accession number(s): B2RDZ8, D3DTB7, Q9NWA1
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 21, 2006
Last sequence update: November 1, 1996
Last modified: August 12, 2020
This is version 163 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Direct protein sequencing, Reference proteome

Documents

  1. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  2. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations
  3. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
  4. Human chromosome 1
    Human chromosome 1: entries, gene names and cross-references to MIM
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