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Protein

AAA-ATPase At3g50940

Gene

At3g50940

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Catalytic activityi

ATP + H2O = ADP + phosphate.By similarity

Cofactori

Mg2+By similarity

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi254 – 261ATPSequence analysis8

GO - Molecular functioni

GO - Biological processi

  • response to salt stress Source: UniProtKB

Keywordsi

Molecular functionHydrolase
LigandATP-binding, Magnesium, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
AAA-ATPase At3g50940 (EC:3.6.1.3By similarity)
Gene namesi
Ordered Locus Names:At3g50940Imported
ORF Names:F18B3.220Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 3

Organism-specific databases

AraportiAT3G50940
TAIRilocus:2078007 AT3G50940

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 25Sequence analysisAdd BLAST25
ChainiPRO_000043471426 – 451AAA-ATPase At3g50940Sequence analysisAdd BLAST426

Proteomic databases

PaxDbiQ147F9

Expressioni

Inductioni

Induced in roots by salt stress.1 Publication

Gene expression databases

ExpressionAtlasiQ147F9 baseline and differential
GenevisibleiQ147F9 AT

Interactioni

Protein-protein interaction databases

STRINGi3702.AT3G50940.1

Structurei

3D structure databases

ProteinModelPortaliQ147F9
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the AAA ATPase family. BCS1 subfamily.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiKOG0743 Eukaryota
COG0465 LUCA
HOGENOMiHOG000237995
OMAiHPSTFRT
OrthoDBiEOG093609HW
PhylomeDBiQ147F9

Family and domain databases

InterProiView protein in InterPro
IPR003593 AAA+_ATPase
IPR025753 AAA_N_dom
IPR003959 ATPase_AAA_core
IPR003960 ATPase_AAA_CS
IPR027417 P-loop_NTPase
PfamiView protein in Pfam
PF00004 AAA, 1 hit
PF14363 AAA_assoc, 1 hit
SMARTiView protein in SMART
SM00382 AAA, 1 hit
SUPFAMiSSF52540 SSF52540, 1 hit
PROSITEiView protein in PROSITE
PS00674 AAA, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q147F9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSSSESHLA TAKTALTAVA SVAAAAILAR SVVQDYMPNE VHEYISHGFR
60 70 80 90 100
RFFSYFSYQM TAVIEEFGGF EHNQVFEAAE AYLSTKISNS TRRIKVNKLE
110 120 130 140 150
KQSNYSVTVE RDEEVVDIFD GVKLSWILVC RHVDKKDFRN PRDLNSTLKS
160 170 180 190 200
EVRSYELSFR KKFKNMVLES YLPFVVEQAA SIKQKFKTLK IFTVDSYSVE
210 220 230 240 250
WTSVTLDHPS TFRTLALDPE VKKNLVEDLD RFVQRKGFYG RVGKAWKRGY
260 270 280 290 300
LLYGPPGTGK SSLIAAIANH LNFDIYDLDL TSLNNNAELR RLLMSTANRS
310 320 330 340 350
ILVVEDIDCS IELKDRSTDQ ENNDPLHKTV TLSGLLNFVD GLWSSCGNER
360 370 380 390 400
IIVFTTNYRE KLDPALLRPG RMDMHIHMSY CTPAAFKVLA SNYLEIQDHI
410 420 430 440 450
LFEQIEEFIR EIEVTPAEVA EQLMRSDSVD KVLQGLVEFL KAKKQIDNSK

A
Length:451
Mass (Da):51,470
Last modified:August 22, 2006 - v1
Checksum:i4AA9712D3B12B04B
GO

Sequence cautioni

The sequence CAB42923 differs from that shown. Reason: Erroneous gene model prediction.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti417A → S in BAC41960 (PubMed:11910074).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL049862 Genomic DNA Translation: CAB42923.1 Sequence problems.
CP002686 Genomic DNA Translation: AEE78729.1
AK117288 mRNA Translation: BAC41960.2
BT026134 mRNA Translation: ABG48490.1
PIRiT08415
RefSeqiNP_190663.2, NM_114954.4
UniGeneiAt.35440

Genome annotation databases

EnsemblPlantsiAT3G50940.1; AT3G50940.1; AT3G50940
GeneIDi824258
GrameneiAT3G50940.1; AT3G50940.1; AT3G50940
KEGGiath:AT3G50940

Similar proteinsi

Entry informationi

Entry nameiAATPC_ARATH
AccessioniPrimary (citable) accession number: Q147F9
Secondary accession number(s): Q8GZ01, Q9SVK5
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 11, 2015
Last sequence update: August 22, 2006
Last modified: April 25, 2018
This is version 99 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

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