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UniProtKB - Q13316 (DMP1_HUMAN)

Protein

Dentin matrix acidic phosphoprotein 1

Gene

DMP1

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

May have a dual function during osteoblast differentiation. In the nucleus of undifferentiated osteoblasts, unphosphorylated form acts as a transcriptional component for activation of osteoblast-specific genes like osteocalcin. During the osteoblast to osteocyte transition phase it is phosphorylated and exported into the extracellular matrix, where it regulates nucleation of hydroxyapatite.1 Publication

GO - Molecular functioni

  • calcium ion binding Source: ProtInc
  • extracellular matrix binding Source: Ensembl
  • integrin binding Source: ProtInc
View the complete GO annotation on QuickGO ...

GO - Biological processi

View the complete GO annotation on QuickGO ...

Keywordsi

Biological processBiomineralization

Enzyme and pathway databases

ReactomeiR-HSA-3000178 ECM proteoglycans
R-HSA-381426 Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)
R-HSA-8957275 Post-translational protein phosphorylation
SignaLinkiQ13316

Names & Taxonomyi

Protein namesi
Recommended name:
Dentin matrix acidic phosphoprotein 1
Short name:
DMP-1
Short name:
Dentin matrix protein 1
Gene namesi
Name:DMP1
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo
Proteomesi
  • UP000005640 Componenti: Chromosome 4

Organism-specific databases

EuPathDBiHostDB:ENSG00000152592.13
HGNCiHGNC:2932 DMP1
MIMi600980 gene
neXtProtiNX_Q13316

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Cytoplasm, Extracellular matrix, Nucleus, Secreted

Pathology & Biotechi

Involvement in diseasei

Hypophosphatemic rickets, autosomal recessive, 1 (ARHR1)2 Publications
The disease is caused by mutations affecting the gene represented in this entry.
Disease descriptionA hereditary form of hypophosphatemic rickets, a disorder of proximal renal tubule function that causes phosphate loss, hypophosphatemia and skeletal deformities, including rickets and osteomalacia unresponsive to vitamin D. Symptoms are bone pain, fractures and growth abnormalities.
See also OMIM:241520

Organism-specific databases

DisGeNETi1758
MalaCardsiDMP1
MIMi241520 phenotype
OpenTargetsiENSG00000152592
Orphaneti289176 Autosomal recessive hypophosphatemic rickets
PharmGKBiPA27379

Polymorphism and mutation databases

BioMutaiDMP1
DMDMi7673998

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 16Sequence analysisAdd BLAST16
ChainiPRO_000002111017 – 513Dentin matrix acidic phosphoprotein 1Add BLAST497

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Glycosylationi25N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi285N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi324N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi345N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi351N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi413N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi426N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi467N-linked (GlcNAc...) asparagineSequence analysis1

Post-translational modificationi

Phosphorylated in the cytosol and extracellular matrix and unphosphorylated in the nucleus. Phosphorylation is necessary for nucleocytoplasmic transport and may be catalyzed by a nuclear isoform of CK2 and can be augmented by calcium. Phosphorylated (in vitro) by FAM20C in the extracellular medium at sites within the S-x-E/pS motif.2 Publications

Keywords - PTMi

Glycoprotein, Phosphoprotein

Proteomic databases

PaxDbiQ13316
PeptideAtlasiQ13316
PRIDEiQ13316
ProteomicsDBi59304
59305 [Q13316-2]

PTM databases

iPTMnetiQ13316
PhosphoSitePlusiQ13316

Expressioni

Tissue specificityi

Expressed in tooth particularly in odontoblast, ameloblast and cementoblast.

Gene expression databases

BgeeiENSG00000152592 Expressed in 80 organ(s), highest expression level in tibia
CleanExiHS_DMP1
GenevisibleiQ13316 HS

Organism-specific databases

HPAiHPA037465

Interactioni

Subunit structurei

Interacts with importin alpha.1 Publication

GO - Molecular functioni

View the complete GO annotation on QuickGO ...

Protein-protein interaction databases

IntActiQ13316, 1 interactor
STRINGi9606.ENSP00000340935

Structurei

3D structure databases

ProteinModelPortaliQ13316
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi364 – 366Cell attachment siteSequence analysis3

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiKOG1181 Eukaryota
ENOG4111M3T LUCA
GeneTreeiENSGT00730000111375
HOGENOMiHOG000220909
HOVERGENiHBG073257
InParanoidiQ13316
OMAiHGDGSEF
OrthoDBiEOG091G0U5E
PhylomeDBiQ13316
TreeFamiTF337029

Family and domain databases

InterProiView protein in InterPro
IPR009889 DMP1
PANTHERiPTHR23400 PTHR23400, 1 hit
PfamiView protein in Pfam
PF07263 DMP1, 1 hit

Sequences (2)i

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

This entry describes 2 isoformsi produced by alternative splicing. AlignAdd to basket
Isoform 1 (identifier: Q13316-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MKISILLMFL WGLSCALPVT RYQNNESEDS EEWKGHLAQA PTPPLESSES 
        60         70         80         90        100
SEGSKVSSEE QANEDPSDST QSEEGLGSDD HQYIYRLAGG FSRSTGKGGD 
       110        120        130        140        150
DKDDDEDDSG DDTFGDDDSG PGPKDRQEGG NSRLGSDEDS DDTIQASEES 
       160        170        180        190        200
APQGQDSAQD TTSESRELDN EDRVDSKPEG GDSTQESESE EHWVGGGSDG 
       210        220        230        240        250
ESSHGDGSEL DDEGMQSDDP ESIRSERGNS RMNSAGMKSK ESGENSEQAN 
       260        270        280        290        300
TQDSGGSQLL EHPSRKIFRK SRISEEDDRS ELDDNNTMEE VKSDSTENSN 
       310        320        330        340        350
SRDTGLSQPR RDSKGDSQED SKENLSQEES QNVDGPSSES SQEANLSSQE 
       360        370        380        390        400
NSSESQEEVV SESRGDNPDP TTSYVEDQED SDSSEEDSSH TLSHSKSESR 
       410        420        430        440        450
EEQADSESSE SLNFSEESPE SPEDENSSSQ EGLQSHSSSA ESQSEESHSE 
       460        470        480        490        500
EDDSDSQDSS RSKEDSNSTE SKSSSEEDGQ LKNIEIESRK LTVDAYHNKP 
       510 
IGDQDDNDCQ DGY
Length:513
Mass (Da):55,782
Last modified:January 1, 1998 - v2
Checksum:i2C1FDE319A5D106F
GO
Isoform 2 (identifier: Q13316-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     46-61: Missing.

Show »
Length:497
Mass (Da):54,115
Checksum:i6E146232B6365507
GO

Natural variant

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Natural variantiVAR_03075069S → C2 PublicationsCorresponds to variant dbSNP:rs10019009EnsemblClinVar.1
Natural variantiVAR_030751117D → N in one individual with tumoral calcinosis. 1 PublicationCorresponds to variant dbSNP:rs140719182Ensembl.1
Natural variantiVAR_030752272R → H1 PublicationCorresponds to variant dbSNP:rs145237146EnsemblClinVar.1
Natural variantiVAR_033848463K → R. Corresponds to variant dbSNP:rs34661425EnsemblClinVar.1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Alternative sequenceiVSP_00419146 – 61Missing in isoform 2. 1 PublicationAdd BLAST16

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U89012 mRNA Translation: AAC51332.1
U34037 Genomic DNA Translation: AAA97602.1
CH471057 Genomic DNA Translation: EAX05996.1
BC130581 mRNA Translation: AAI30582.1
BC132865 mRNA Translation: AAI32866.1
U65378 mRNA Translation: AAB87728.1
CCDSiCCDS3623.1 [Q13316-1]
CCDS43249.1 [Q13316-2]
RefSeqiNP_001073380.1, NM_001079911.2 [Q13316-2]
NP_004398.1, NM_004407.3 [Q13316-1]
UniGeneiHs.652366

Genome annotation databases

EnsembliENST00000282479; ENSP00000282479; ENSG00000152592 [Q13316-2]
ENST00000339673; ENSP00000340935; ENSG00000152592 [Q13316-1]
GeneIDi1758
KEGGihsa:1758
UCSCiuc003hqv.4 human [Q13316-1]

Keywords - Coding sequence diversityi

Alternative splicing, Polymorphism

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U89012 mRNA Translation: AAC51332.1
U34037 Genomic DNA Translation: AAA97602.1
CH471057 Genomic DNA Translation: EAX05996.1
BC130581 mRNA Translation: AAI30582.1
BC132865 mRNA Translation: AAI32866.1
U65378 mRNA Translation: AAB87728.1
CCDSiCCDS3623.1 [Q13316-1]
CCDS43249.1 [Q13316-2]
RefSeqiNP_001073380.1, NM_001079911.2 [Q13316-2]
NP_004398.1, NM_004407.3 [Q13316-1]
UniGeneiHs.652366

3D structure databases

ProteinModelPortaliQ13316
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ13316, 1 interactor
STRINGi9606.ENSP00000340935

PTM databases

iPTMnetiQ13316
PhosphoSitePlusiQ13316

Polymorphism and mutation databases

BioMutaiDMP1
DMDMi7673998

Proteomic databases

PaxDbiQ13316
PeptideAtlasiQ13316
PRIDEiQ13316
ProteomicsDBi59304
59305 [Q13316-2]

Protocols and materials databases

DNASUi1758
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000282479; ENSP00000282479; ENSG00000152592 [Q13316-2]
ENST00000339673; ENSP00000340935; ENSG00000152592 [Q13316-1]
GeneIDi1758
KEGGihsa:1758
UCSCiuc003hqv.4 human [Q13316-1]

Organism-specific databases

CTDi1758
DisGeNETi1758
EuPathDBiHostDB:ENSG00000152592.13
GeneCardsiDMP1
HGNCiHGNC:2932 DMP1
HPAiHPA037465
MalaCardsiDMP1
MIMi241520 phenotype
600980 gene
neXtProtiNX_Q13316
OpenTargetsiENSG00000152592
Orphaneti289176 Autosomal recessive hypophosphatemic rickets
PharmGKBiPA27379
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG1181 Eukaryota
ENOG4111M3T LUCA
GeneTreeiENSGT00730000111375
HOGENOMiHOG000220909
HOVERGENiHBG073257
InParanoidiQ13316
OMAiHGDGSEF
OrthoDBiEOG091G0U5E
PhylomeDBiQ13316
TreeFamiTF337029

Enzyme and pathway databases

ReactomeiR-HSA-3000178 ECM proteoglycans
R-HSA-381426 Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)
R-HSA-8957275 Post-translational protein phosphorylation
SignaLinkiQ13316

Miscellaneous databases

ChiTaRSiDMP1 human
GeneWikiiDMP1_(gene)
GenomeRNAii1758
PROiPR:Q13316
SOURCEiSearch...

Gene expression databases

BgeeiENSG00000152592 Expressed in 80 organ(s), highest expression level in tibia
CleanExiHS_DMP1
GenevisibleiQ13316 HS

Family and domain databases

InterProiView protein in InterPro
IPR009889 DMP1
PANTHERiPTHR23400 PTHR23400, 1 hit
PfamiView protein in Pfam
PF07263 DMP1, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiDMP1_HUMAN
AccessioniPrimary (citable) accession number: Q13316
Secondary accession number(s): A1L4L3, O43265
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: January 1, 1998
Last modified: November 7, 2018
This is version 147 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 4
    Human chromosome 4: entries, gene names and cross-references to MIM
  2. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations
  4. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
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