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UniProtKB - Q13219 (PAPP1_HUMAN)

Entry version 200 (08 May 2019)
Sequence version 3 (10 Feb 2009)
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Protein

Pappalysin-1

Gene

PAPPA

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Metalloproteinase which specifically cleaves IGFBP-4 and IGFBP-5, resulting in release of bound IGF. Cleavage of IGFBP-4 is dramatically enhanced by the presence of IGF, whereas cleavage of IGFBP-5 is slightly inhibited by the presence of IGF.3 Publications

<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section describes the catalytic activity of an enzyme, i.e. a chemical reaction that the enzyme catalyzes.<p><a href='/help/catalytic_activity' target='_top'>More...</a></p>Catalytic activityi

  • Cleavage of the 135-Met-|-Lys-136 bond in insulin-like growth factor binding protein (IGFBP)-4, and the 143-Ser-|-Lys-144 bond in IGFBP-5. EC:3.4.24.79

<p>This subsection of the ‘Function’ section provides information relevant to cofactors. A cofactor is any non-protein substance required for a protein to be catalytically active. Some cofactors are inorganic, such as the metal atoms zinc, iron, and copper in various oxidation states. Others, such as most vitamins, are organic.<p><a href='/help/cofactor' target='_top'>More...</a></p>Cofactori

Zn2+By similarityNote: Binds 1 zinc ion per subunit.By similarity

<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section describes regulatory mechanisms for enzymes, transporters or microbial transcription factors, and reports the components which regulate (by activation or inhibition) the reaction.<p><a href='/help/activity_regulation' target='_top'>More...</a></p>Activity regulationi

Inhibited by complexation with the proform of PRG2.1 Publication

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section indicates at which position the protein binds a given metal ion. The nature of the metal is indicated in the ‘Description’ field.<p><a href='/help/metal' target='_top'>More...</a></p>Metal bindingi562Zinc; catalyticPROSITE-ProRule annotation1
<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section is used for enzymes and indicates the residues directly involved in catalysis.<p><a href='/help/act_site' target='_top'>More...</a></p>Active sitei563PROSITE-ProRule annotation1
Metal bindingi566Zinc; catalyticPROSITE-ProRule annotation1
Metal bindingi572Zinc; catalyticPROSITE-ProRule annotation1

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

Complete GO annotation on QuickGO ...

GO - Biological processi

Complete GO annotation on QuickGO ...

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionHydrolase, Metalloprotease, Protease
LigandMetal-binding, Zinc

Enzyme and pathway databases

BioCyc Collection of Pathway/Genome Databases

More...BioCyci		MetaCyc:ENSG00000119398-MONOMER

BRENDA Comprehensive Enzyme Information System

More...BRENDAi		3.4.24.79 2681

Reactome - a knowledgebase of biological pathways and processes

More...Reactomei		R-HSA-381426 Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)

Protein family/group databases

MEROPS protease database

More...MEROPSi		M43.004

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Pappalysin-1 (EC:3.4.24.79)
Alternative name(s):
Insulin-like growth factor-dependent IGF-binding protein 4 protease
Short name:
IGF-dependent IGFBP-4 protease
Short name:
IGFBP-4ase
Pregnancy-associated plasma protein A
Short name:
PAPP-A
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:PAPPA
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiHomo sapiens (Human)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri9606 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000005640 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 9

Organism-specific databases

Human Gene Nomenclature Database

More...HGNCi		HGNC:8602 PAPPA

Online Mendelian Inheritance in Man (OMIM)

More...MIMi		176385 gene

neXtProt; the human protein knowledge platform

More...neXtProti		NX_Q13219

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Keywords - Cellular componenti

Secreted

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

Organism-specific databases

DisGeNET

More...DisGeNETi		5069

Open Targets

More...OpenTargetsi		ENSG00000182752

The Pharmacogenetics and Pharmacogenomics Knowledge Base

More...PharmGKBi		PA32935

Polymorphism and mutation databases

BioMuta curated single-nucleotide variation and disease association database

More...BioMutai		PAPPA

Domain mapping of disease mutations (DMDM)

More...DMDMi		223590248

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section denotes the presence of an N-terminal signal peptide.<p><a href='/help/signal' target='_top'>More...</a></p>Signal peptidei1 – 22Sequence analysisAdd BLAST22
<p>This subsection of the <a href="http://www.uniprot.org/help/ptm_processing_section">PTM / Processing</a> section describes a propeptide, which is a part of a protein that is cleaved during maturation or activation. Once cleaved, a propeptide generally has no independent biological function.<p><a href='/help/propep' target='_top'>More...</a></p>PropeptideiPRO_000002924523 – 802 PublicationsAdd BLAST58
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_000002924681 – 1627Pappalysin-1Add BLAST1547

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the PTM / Processing":/help/ptm_processing_section section describes the positions of cysteine residues participating in disulfide bonds.<p><a href='/help/disulfid' target='_top'>More...</a></p>Disulfide bondi144 ↔ 235PROSITE-ProRule annotation1 Publication
Disulfide bondi327 ↔ 622PROSITE-ProRule annotation1 Publication
Disulfide bondi332 ↔ 657PROSITE-ProRule annotation1 Publication
<p>This subsection of the <a href="http://www.uniprot.org/help/ptm_processing_section">PTM / Processing</a> section specifies the position and type of each covalently attached glycan group (mono-, di-, or polysaccharide).<p><a href='/help/carbohyd' target='_top'>More...</a></p>Glycosylationi390N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi402N-linked (GlcNAc...) asparagine1 Publication1
Disulfide bondi414 ↔ 428PROSITE-ProRule annotation1 Publication
Disulfide bondi424 ↔ 440PROSITE-ProRule annotation1 Publication
Glycosylationi429N-linked (GlcNAc...) asparagine1 Publication1
Disulfide bondi457 ↔ 473PROSITE-ProRule annotation1 Publication
Disulfide bondi461Interchain (with C-51 in PRG2 proform)PROSITE-ProRule annotation1 Publication
Disulfide bondi474 ↔ 485PROSITE-ProRule annotation1 Publication
Glycosylationi480N-linked (GlcNAc...) asparagine1 Publication1
Disulfide bondi583 ↔ 600Or C-583 with C-612PROSITE-ProRule annotation1 Publication
Disulfide bondi587 ↔ 612Or C-587 with C-600PROSITE-ProRule annotation1 Publication
Glycosylationi601N-linked (GlcNAc...) asparagine1 Publication1
Glycosylationi619N-linked (GlcNAc...) asparagine1 Publication1
Disulfide bondi710 ↔ 878PROSITE-ProRule annotation1 Publication
Disulfide bondi713 ↔ 881PROSITE-ProRule annotation1 Publication
Glycosylationi725N-linked (GlcNAc...) asparagine1 Publication1
Disulfide bondi732Interchain (with C-169 in PRG2 proform)PROSITE-ProRule annotation1 Publication
Disulfide bondi753 ↔ 835PROSITE-ProRule annotation1 Publication
Disulfide bondi775 ↔ 781PROSITE-ProRule annotation1 Publication
Glycosylationi825N-linked (GlcNAc...) asparagineSequence analysis1
Disulfide bondi947 ↔ 975PROSITE-ProRule annotation1 Publication
Disulfide bondi960 ↔ 971PROSITE-ProRule annotation1 Publication
Disulfide bondi983 ↔ 990PROSITE-ProRule annotation1 Publication
Disulfide bondi999 ↔ 1011PROSITE-ProRule annotation1 Publication
Glycosylationi1026N-linked (GlcNAc...) asparagine1 Publication1
Disulfide bondi1036 ↔ 1070PROSITE-ProRule annotation1 Publication
Disulfide bondi1051 ↔ 1139PROSITE-ProRule annotation1 Publication
Disulfide bondi1192 ↔ 1205PROSITE-ProRule annotation1 Publication
Disulfide bondi1210InterchainPROSITE-ProRule annotation1 Publication
Disulfide bondi1215 ↔ 1269PROSITE-ProRule annotation1 Publication
Glycosylationi1222N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi1226N-linked (GlcNAc...) asparagine1 Publication1
Disulfide bondi1227 ↔ 1238PROSITE-ProRule annotation1 Publication
Disulfide bondi1242 ↔ 1280PROSITE-ProRule annotation1 Publication
Disulfide bondi1285 ↔ 1329PROSITE-ProRule annotation1 Publication
Disulfide bondi1300 ↔ 1310PROSITE-ProRule annotation1 Publication
Disulfide bondi1314 ↔ 1342PROSITE-ProRule annotation1 Publication
Glycosylationi1323N-linked (GlcNAc...) asparagine1 Publication1
Disulfide bondi1346 ↔ 1399PROSITE-ProRule annotation1 Publication
Disulfide bondi1362 ↔ 1373PROSITE-ProRule annotation1 Publication
Disulfide bondi1377 ↔ 1410PROSITE-ProRule annotation1 Publication
Disulfide bondi1415 ↔ 1458PROSITE-ProRule annotation1 Publication
Disulfide bondi1428 ↔ 1438PROSITE-ProRule annotation1 Publication
Disulfide bondi1442 ↔ 1471PROSITE-ProRule annotation1 Publication
Glycosylationi1465N-linked (GlcNAc...) asparagineSequence analysis1
Disulfide bondi1478 ↔ 1539PROSITE-ProRule annotation1 Publication
Disulfide bondi1492 ↔ 1502PROSITE-ProRule annotation1 Publication
Disulfide bondi1506 ↔ 1554PROSITE-ProRule annotation1 Publication
Glycosylationi1519N-linked (GlcNAc...) asparagine1 Publication1
Disulfide bondi1558 ↔ 1576PROSITE-ProRule annotation1 Publication

<p>This subsection of the <a href="http://www.uniprot.org/help/ptm_processing_section">PTM/processing</a> section describes post-translational modifications (PTMs). This subsection <strong>complements</strong> the information provided at the sequence level or describes modifications for which <strong>position-specific data is not yet available</strong>.<p><a href='/help/post-translational_modification' target='_top'>More...</a></p>Post-translational modificationi

There appear to be no free sulfhydryl groups.

Keywords - PTMi

Disulfide bond, Glycoprotein, Zymogen

Proteomic databases

Encyclopedia of Proteome Dynamics

More...EPDi		Q13219

jPOST - Japan Proteome Standard Repository/Database

More...jPOSTi		Q13219

PaxDb, a database of protein abundance averages across all three domains of life

More...PaxDbi		Q13219

PeptideAtlas

More...PeptideAtlasi		Q13219

PRoteomics IDEntifications database

More...PRIDEi		Q13219

ProteomicsDB human proteome resource

More...ProteomicsDBi		59231

PTM databases

GlyConnect protein glycosylation platform

More...GlyConnecti		1594

iPTMnet integrated resource for PTMs in systems biology context

More...iPTMneti		Q13219

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...PhosphoSitePlusi		Q13219

Miscellaneous databases

CutDB - Proteolytic event database

More...PMAP-CutDBi		Q13219

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

<p>This subsection of the ‘Expression’ section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms. By default, the information is derived from experiments at the mRNA level, unless specified ‘at protein level’. <br></br>Examples: <a href="http://www.uniprot.org/uniprot/P92958#expression">P92958</a>, <a href="http://www.uniprot.org/uniprot/Q8TDN4#expression">Q8TDN4</a>, <a href="http://www.uniprot.org/uniprot/O14734#expression">O14734</a><p><a href='/help/tissue_specificity' target='_top'>More...</a></p>Tissue specificityi

High levels in placenta and pregnancy serum. In placenta, expressed in X cells in septa and anchoring villi, and in syncytiotrophoblasts in the chorionic villi. Lower levels are found in a variety of other tissues including kidney, myometrium, endometrium, ovaries, breast, prostate, bone marrow, colon, fibroblasts and osteoblasts.4 Publications

<p>This subsection of the ‘Expression’ section provides information on the expression of the gene product at various stages of a cell, tissue or organism development. By default, the information is derived from experiments at the mRNA level, unless specified ‘at the protein level’.<p><a href='/help/developmental_stage' target='_top'>More...</a></p>Developmental stagei

Present in serum and placenta during pregnancy; levels increase throughout pregnancy.2 Publications

<p>This subsection of the ‘Expression’ section reports the experimentally proven effects of inducers and repressors (usually chemical compounds or environmental factors) on the level of protein (or mRNA) expression (up-regulation, down-regulation, constitutive expression).<p><a href='/help/induction' target='_top'>More...</a></p>Inductioni

By 8-bromoadenosine-3',5'-phosphate.1 Publication

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...Bgeei		ENSG00000182752 Expressed in 197 organ(s), highest expression level in placenta

Genevisible search portal to normalized and curated expression data from Genevestigator

More...Genevisiblei		Q13219 HS

Organism-specific databases

Human Protein Atlas

More...HPAi		CAB016724
HPA001667

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction_section">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function_section">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Homodimer; disulfide-linked. In pregnancy serum, predominantly found as a disulfide-linked 2:2 heterotetramer with the proform of PRG2.3 Publications

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGrid)

More...BioGridi		111104, 10 interactors

CORUM comprehensive resource of mammalian protein complexes

More...CORUMi		Q13219

Protein interaction database and analysis system

More...IntActi		Q13219, 8 interactors

Molecular INTeraction database

More...MINTi		Q13219

STRING: functional protein association networks

More...STRINGi		9606.ENSP00000330658

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...SMRi		Q13219

Database of comparative protein structure models

More...ModBasei		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini1213 – 1282Sushi 1PROSITE-ProRule annotationAdd BLAST70
Domaini1283 – 1344Sushi 2PROSITE-ProRule annotationAdd BLAST62
Domaini1345 – 1412Sushi 3PROSITE-ProRule annotationAdd BLAST68
Domaini1413 – 1473Sushi 4PROSITE-ProRule annotationAdd BLAST61
Domaini1476 – 1556Sushi 5PROSITE-ProRule annotationAdd BLAST81

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni272 – 583MetalloproteaseAdd BLAST312

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi24 – 84Arg-richAdd BLAST61

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the peptidase M43B family.Curated

Keywords - Domaini

Repeat, Signal, Sushi

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...eggNOGi		ENOG410KDUG Eukaryota
ENOG410YRGU LUCA

Ensembl GeneTree

More...GeneTreei		ENSGT00940000156654

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...HOGENOMi		HOG000067833

InParanoid: Eukaryotic Ortholog Groups

More...InParanoidi		Q13219

KEGG Orthology (KO)

More...KOi		K07762

Identification of Orthologs from Complete Genome Data

More...OMAi		SHQDQQC

Database of Orthologous Groups

More...OrthoDBi		105200at2759

Database for complete collections of gene phylogenies

More...PhylomeDBi		Q13219

TreeFam database of animal gene trees

More...TreeFami		TF331636

Family and domain databases

Conserved Domains Database

More...CDDi		cd00033 CCP, 4 hits
cd04275 ZnMc_pappalysin_like, 1 hit

Gene3D Structural and Functional Annotation of Protein Families

More...Gene3Di		3.40.390.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR013320 ConA-like_dom_sf
IPR006558 LamG-like
IPR024079 MetalloPept_cat_dom_sf
IPR011936 Myxo_disulph_rpt
IPR000800 Notch_dom
IPR030433 PAPPA
IPR008754 Peptidase_M43
IPR035976 Sushi/SCR/CCP_sf
IPR000436 Sushi_SCR_CCP_dom

The PANTHER Classification System

More...PANTHERi		PTHR46130:SF2 PTHR46130:SF2, 1 hit

Pfam protein domain database

More...Pfami		View protein in Pfam
PF05572 Peptidase_M43, 1 hit
PF00084 Sushi, 3 hits

Simple Modular Architecture Research Tool; a protein domain database

More...SMARTi		View protein in SMART
SM00032 CCP, 4 hits
SM00560 LamGL, 1 hit
SM00004 NL, 3 hits

Superfamily database of structural and functional annotation

More...SUPFAMi		SSF49899 SSF49899, 1 hit
SSF57535 SSF57535, 4 hits

TIGRFAMs; a protein family database

More...TIGRFAMsi		TIGR02232 myxo_disulf_rpt, 1 hit

PROSITE; a protein domain and family database

More...PROSITEi		View protein in PROSITE
PS50923 SUSHI, 5 hits
PS00142 ZINC_PROTEASE, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is in its mature form or if it represents the precursor.<p><a href='/help/sequence_processing' target='_top'>More...</a></p>Sequence processingi: The displayed sequence is further processed into a mature form.

Q13219-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MRLWSWVLHL GLLSAALGCG LAERPRRARR DPRAGRPPRP AAGPATCATR 
        60         70         80         90        100
AARGRRASPP PPPPPGGAWE AVRVPRRRQQ REARGATEEP SPPSRALYFS 
       110        120        130        140        150
GRGEQLRLRA DLELPRDAFT LQVWLRAEGG QRSPAVITGL YDKCSYISRD 
       160        170        180        190        200
RGWVVGIHTI SDQDNKDPRY FFSLKTDRAR QVTTINAHRS YLPGQWVYLA 
       210        220        230        240        250
ATYDGQFMKL YVNGAQVATS GEQVGGIFSP LTQKCKVLML GGSALNHNYR 
       260        270        280        290        300
GYIEHFSLWK VARTQREILS DMETHGAHTA LPQLLLQENW DNVKHAWSPM 
       310        320        330        340        350
KDGSSPKVEF SNAHGFLLDT SLEPPLCGQT LCDNTEVIAS YNQLSSFRQP 
       360        370        380        390        400
KVVRYRVVNL YEDDHKNPTV TREQVDFQHH QLAEAFKQYN ISWELDVLEV 
       410        420        430        440        450
SNSSLRRRLI LANCDISKIG DENCDPECNH TLTGHDGGDC RHLRHPAFVK 
       460        470        480        490        500
KQHNGVCDMD CNYERFNFDG GECCDPEITN VTQTCFDPDS PHRAYLDVNE 
       510        520        530        540        550
LKNILKLDGS THLNIFFAKS SEEELAGVAT WPWDKEALMH LGGIVLNPSF 
       560        570        580        590        600
YGMPGHTHTM IHEIGHSLGL YHVFRGISEI QSCSDPCMET EPSFETGDLC 
       610        620        630        640        650
NDTNPAPKHK SCGDPGPGND TCGFHSFFNT PYNNFMSYAD DDCTDSFTPN 
       660        670        680        690        700
QVARMHCYLD LVYQGWQPSR KPAPVALAPQ VLGHTTDSVT LEWFPPIDGH 
       710        720        730        740        750
FFERELGSAC HLCLEGRILV QYASNASSPM PCSPSGHWSP REAEGHPDVE 
       760        770        780        790        800
QPCKSSVRTW SPNSAVNPHT VPPACPEPQG CYLELEFLYP LVPESLTIWV 
       810        820        830        840        850
TFVSTDWDSS GAVNDIKLLA VSGKNISLGP QNVFCDVPLT IRLWDVGEEV 
       860        870        880        890        900
YGIQIYTLDE HLEIDAAMLT STADTPLCLQ CKPLKYKVVR DPPLQMDVAS 
       910        920        930        940        950
ILHLNRKFVD MDLNLGSVYQ YWVITISGTE ESEPSPAVTY IHGSGYCGDG 
       960        970        980        990       1000
IIQKDQGEQC DDMNKINGDG CSLFCRQEVS FNCIDEPSRC YFHDGDGVCE 
      1010       1020       1030       1040       1050
EFEQKTSIKD CGVYTPQGFL DQWASNASVS HQDQQCPGWV IIGQPAASQV 
      1060       1070       1080       1090       1100
CRTKVIDLSE GISQHAWYPC TISYPYSQLA QTTFWLRAYF SQPMVAAAVI 
      1110       1120       1130       1140       1150
VHLVTDGTYY GDQKQETISV QLLDTKDQSH DLGLHVLSCR NNPLIIPVVH 
      1160       1170       1180       1190       1200
DLSQPFYHSQ AVRVSFSSPL VAISGVALRS FDNFDPVTLS SCQRGETYSP 
      1210       1220       1230       1240       1250
AEQSCVHFAC EKTDCPELAV ENASLNCSSS DRYHGAQCTV SCRTGYVLQI 
      1260       1270       1280       1290       1300
RRDDELIKSQ TGPSVTVTCT EGKWNKQVAC EPVDCSIPDH HQVYAASFSC 
      1310       1320       1330       1340       1350
PEGTTFGSQC SFQCRHPAQL KGNNSLLTCM EDGLWSFPEA LCELMCLAPP 
      1360       1370       1380       1390       1400
PVPNADLQTA RCRENKHKVG SFCKYKCKPG YHVPGSSRKS KKRAFKTQCT 
      1410       1420       1430       1440       1450
QDGSWQEGAC VPVTCDPPPP KFHGLYQCTN GFQFNSECRI KCEDSDASQG 
      1460       1470       1480       1490       1500
LGSNVIHCRK DGTWNGSFHV CQEMQGQCSV PNELNSNLKL QCPDGYAIGS 
      1510       1520       1530       1540       1550
ECATSCLDHN SESIILPMNV TVRDIPHWLN PTRVERVVCT AGLKWYPHPA 
      1560       1570       1580       1590       1600
LIHCVKGCEP FMGDNYCDAI NNRAFCNYDG GDCCTSTVKT KKVTPFPMSC 
      1610       1620 
DLQGDCACRD PQAQEHSRKD LRGYSHG
Length:1,627
Mass (Da):180,973
Last modified:February 10, 2009 - v3
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i202ECA62C1107207
GO

<p>This subsection of the ‘Sequence’ section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence AAC50543 differs from that shown. Reason: Frameshift at positions 51 and 67.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti107R → RV in AAC50543 (PubMed:8620868).Curated1
Sequence conflicti107R → RV in CAA48341 (PubMed:7508748).Curated1
Sequence conflicti511 – 512TH → RD AA sequence (PubMed:7508748).Curated2
Sequence conflicti1622R → Q in AAH78657 (PubMed:15489334).Curated1

Natural variant

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section describes natural variant(s) of the protein sequence.<p><a href='/help/variant' target='_top'>More...</a></p>Natural variantiVAR_0570915S → I. Corresponds to variant dbSNP:rs417012Ensembl.1
Natural variantiVAR_057092325P → L. Corresponds to variant dbSNP:rs445159Ensembl.1
Natural variantiVAR_011419944S → R2 PublicationsCorresponds to variant dbSNP:rs117124330Ensembl.1
Natural variantiVAR_0187261224S → Y2 PublicationsCorresponds to variant dbSNP:rs7020782Ensembl.1

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
U28727 mRNA Translation: AAC50543.1 Frameshift.
AL137024 Genomic DNA No translation available.
AL353141 Genomic DNA No translation available.
AL691426 Genomic DNA No translation available.
BC078657 mRNA Translation: AAH78657.1
X68280 mRNA Translation: CAA48341.1

The Consensus CDS (CCDS) project

More...CCDSi		CCDS6813.1

Protein sequence database of the Protein Information Resource

More...PIRi		S65464

NCBI Reference Sequences

More...RefSeqi		NP_002572.2, NM_002581.4

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...Ensembli		ENST00000328252; ENSP00000330658; ENSG00000182752

Database of genes from NCBI RefSeq genomes

More...GeneIDi		5069

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		hsa:5069

UCSC genome browser

More...UCSCi		uc004bjn.4 human

Keywords - Coding sequence diversityi

Polymorphism

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U28727 mRNA Translation: AAC50543.1 Frameshift.
AL137024 Genomic DNA No translation available.
AL353141 Genomic DNA No translation available.
AL691426 Genomic DNA No translation available.
BC078657 mRNA Translation: AAH78657.1
X68280 mRNA Translation: CAA48341.1
CCDSiCCDS6813.1
PIRiS65464
RefSeqiNP_002572.2, NM_002581.4

3D structure databases

SMRiQ13219
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi111104, 10 interactors
CORUMiQ13219
IntActiQ13219, 8 interactors
MINTiQ13219
STRINGi9606.ENSP00000330658

Protein family/group databases

MEROPSiM43.004

PTM databases

GlyConnecti1594
iPTMnetiQ13219
PhosphoSitePlusiQ13219

Polymorphism and mutation databases

BioMutaiPAPPA
DMDMi223590248

Proteomic databases

EPDiQ13219
jPOSTiQ13219
PaxDbiQ13219
PeptideAtlasiQ13219
PRIDEiQ13219
ProteomicsDBi59231

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000328252; ENSP00000330658; ENSG00000182752
GeneIDi5069
KEGGihsa:5069
UCSCiuc004bjn.4 human

Organism-specific databases

Comparative Toxicogenomics Database

More...CTDi		5069
DisGeNETi5069

GeneCards: human genes, protein and diseases

More...GeneCardsi		PAPPA

H-Invitational Database, human transcriptome db

More...H-InvDBi		HIX0025885
HGNCiHGNC:8602 PAPPA
HPAiCAB016724
HPA001667
MIMi176385 gene
neXtProtiNX_Q13219
OpenTargetsiENSG00000182752
PharmGKBiPA32935

GenAtlas: human gene database

More...GenAtlasi		Search...

Phylogenomic databases

eggNOGiENOG410KDUG Eukaryota
ENOG410YRGU LUCA
GeneTreeiENSGT00940000156654
HOGENOMiHOG000067833
InParanoidiQ13219
KOiK07762
OMAiSHQDQQC
OrthoDBi105200at2759
PhylomeDBiQ13219
TreeFamiTF331636

Enzyme and pathway databases

BioCyciMetaCyc:ENSG00000119398-MONOMER
BRENDAi3.4.24.79 2681
ReactomeiR-HSA-381426 Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)

Miscellaneous databases

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

More...ChiTaRSi		PAPPA human

The Gene Wiki collection of pages on human genes and proteins

More...GeneWikii		Pregnancy-associated_plasma_protein_A

Database of phenotypes from RNA interference screens in Drosophila and Homo sapiens

More...GenomeRNAii		5069
PMAP-CutDBiQ13219

Protein Ontology

More...PROi		PR:Q13219

The Stanford Online Universal Resource for Clones and ESTs

More...SOURCEi		Search...

Gene expression databases

BgeeiENSG00000182752 Expressed in 197 organ(s), highest expression level in placenta
GenevisibleiQ13219 HS

Family and domain databases

CDDicd00033 CCP, 4 hits
cd04275 ZnMc_pappalysin_like, 1 hit
Gene3Di3.40.390.10, 1 hit
InterProiView protein in InterPro
IPR013320 ConA-like_dom_sf
IPR006558 LamG-like
IPR024079 MetalloPept_cat_dom_sf
IPR011936 Myxo_disulph_rpt
IPR000800 Notch_dom
IPR030433 PAPPA
IPR008754 Peptidase_M43
IPR035976 Sushi/SCR/CCP_sf
IPR000436 Sushi_SCR_CCP_dom
PANTHERiPTHR46130:SF2 PTHR46130:SF2, 1 hit
PfamiView protein in Pfam
PF05572 Peptidase_M43, 1 hit
PF00084 Sushi, 3 hits
SMARTiView protein in SMART
SM00032 CCP, 4 hits
SM00560 LamGL, 1 hit
SM00004 NL, 3 hits
SUPFAMiSSF49899 SSF49899, 1 hit
SSF57535 SSF57535, 4 hits
TIGRFAMsiTIGR02232 myxo_disulf_rpt, 1 hit
PROSITEiView protein in PROSITE
PS50923 SUSHI, 5 hits
PS00142 ZINC_PROTEASE, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiPAPP1_HUMAN
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q13219
Secondary accession number(s): B1AMF9
, Q08371, Q68G52, Q9UDK7
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 26, 2001
Last sequence update: February 10, 2009
Last modified: May 8, 2019
This is version 200 of the entry and version 3 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Human chromosome 9
    Human chromosome 9: entries, gene names and cross-references to MIM
  2. SIMILARITY comments
    Index of protein domains and families
  3. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  4. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations
  5. Peptidase families
    Classification of peptidase families and list of entries
  6. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
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