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Protein

3-ketoacyl-CoA thiolase

Gene

fadA

Organism
Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed.UniRule annotation

Catalytic activityi

Acyl-CoA + acetyl-CoA = CoA + 3-oxoacyl-CoA.UniRule annotation

Pathwayi: fatty acid beta-oxidation

This protein is involved in the pathway fatty acid beta-oxidation, which is part of Lipid metabolism.UniRule annotation
View all proteins of this organism that are known to be involved in the pathway fatty acid beta-oxidation and in Lipid metabolism.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei91Acyl-thioester intermediateUniRule annotation1
Active sitei343Proton acceptorUniRule annotation1
Active sitei373Proton acceptorUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionAcyltransferase, Transferase
Biological processFatty acid metabolism, Lipid degradation, Lipid metabolism

Enzyme and pathway databases

BioCyciSDEN318161:G1G6C-14-MONOMER
UniPathwayiUPA00659

Names & Taxonomyi

Protein namesi
Recommended name:
3-ketoacyl-CoA thiolaseUniRule annotation (EC:2.3.1.16UniRule annotation)
Alternative name(s):
Acetyl-CoA acyltransferaseUniRule annotation
Beta-ketothiolaseUniRule annotation
Fatty acid oxidation complex subunit betaUniRule annotation
Gene namesi
Name:fadAUniRule annotation
Ordered Locus Names:Sden_0014
OrganismiShewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)
Taxonomic identifieri318161 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
Proteomesi
  • UP000001982 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002929011 – 3873-ketoacyl-CoA thiolaseAdd BLAST387

Proteomic databases

PRIDEiQ12TB5

Interactioni

Subunit structurei

Heterotetramer of two alpha chains (FadB) and two beta chains (FadA).UniRule annotation

Protein-protein interaction databases

STRINGi318161.Sden_0014

Structurei

3D structure databases

ProteinModelPortaliQ12TB5
SMRiQ12TB5
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the thiolase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105CHU Bacteria
COG0183 LUCA
HOGENOMiHOG000012239
KOiK00632
OMAiCGGTESM
OrthoDBiPOG091H0I7B

Family and domain databases

CDDicd00751 thiolase, 1 hit
Gene3Di3.40.47.10, 4 hits
HAMAPiMF_01620 FadA, 1 hit
InterProiView protein in InterPro
IPR012805 FadA
IPR002155 Thiolase
IPR016039 Thiolase-like
IPR020615 Thiolase_acyl_enz_int_AS
IPR020610 Thiolase_AS
IPR020617 Thiolase_C
IPR020613 Thiolase_CS
IPR020616 Thiolase_N
PfamiView protein in Pfam
PF02803 Thiolase_C, 1 hit
PF00108 Thiolase_N, 1 hit
PIRSFiPIRSF000429 Ac-CoA_Ac_transf, 1 hit
SUPFAMiSSF53901 SSF53901, 2 hits
TIGRFAMsiTIGR01930 AcCoA-C-Actrans, 1 hit
TIGR02445 fadA, 1 hit
PROSITEiView protein in PROSITE
PS00098 THIOLASE_1, 1 hit
PS00737 THIOLASE_2, 1 hit
PS00099 THIOLASE_3, 1 hit

Sequencei

Sequence statusi: Complete.

Q12TB5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKQAVIVDCI RTPMGRSKAG VFRNVRAETL SAELMKALLI RNPQLDPSLI
60 70 80 90 100
EDVIWGCVQQ TLEQGFNIAR NASLLAGIPK TAGAVTVNRL CGSSMDAIHQ
110 120 130 140 150
AARAIMTGMG DTFIIGGVEH MGHVPMNHGV DFHPGLANRV AKASGMMGLT
160 170 180 190 200
AEMLGKMHGI SREQQDAFAV RSHQRAHAAT VEGRFAKEIW AMEGHDANGA
210 220 230 240 250
LIKVMHDEVI RPETTMESLA GLRPVFDPAN GTVTAGTSSA LSDGASAMLV
260 270 280 290 300
MEESKARALG LPIRARIRSM AVAGCDAAIM GYGPVPATQK ALARAGLTVA
310 320 330 340 350
DLDVIELNEA FAAQSLPCVK DLGLQDVVEE KINLNGGAIA LGHPLGCSGA
360 370 380
RISTTLINLM EEKDATIGLA TMCIGLGQGI ATVFERV
Length:387
Mass (Da):40,735
Last modified:August 22, 2006 - v1
Checksum:i6A2B43802100C3E2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000302 Genomic DNA Translation: ABE53311.1
RefSeqiWP_011494480.1, NC_007954.1

Genome annotation databases

EnsemblBacteriaiABE53311; ABE53311; Sden_0014
KEGGisdn:Sden_0014

Similar proteinsi

Entry informationi

Entry nameiFADA_SHEDO
AccessioniPrimary (citable) accession number: Q12TB5
Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 26, 2007
Last sequence update: August 22, 2006
Last modified: May 23, 2018
This is version 82 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

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