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Protein

Protein STB3

Gene

STB3

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Miscellaneous

Present with 639 molecules/cell in log phase SD medium.1 Publication

GO - Molecular functioni

  • proximal promoter DNA-binding transcription activator activity, RNA polymerase II-specific Source: SGD
  • sequence-specific DNA binding Source: SGD

GO - Biological processi

Enzyme and pathway databases

BioCyciYEAST:G3O-29758-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Protein STB3
Alternative name(s):
SIN3-binding protein 3
Gene namesi
Name:STB3
Ordered Locus Names:YDR169C
ORF Names:YD9489.04c
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
Proteomesi
  • UP000002311 Componenti: Chromosome IV

Organism-specific databases

SGDiS000002576 STB3

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000722541 – 513Protein STB3Add BLAST513

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei254PhosphoserineCombined sources1

Keywords - PTMi

Phosphoprotein

Proteomic databases

MaxQBiQ12427
PaxDbiQ12427
PRIDEiQ12427
TopDownProteomicsiQ12427

PTM databases

iPTMnetiQ12427

Interactioni

Subunit structurei

Interacts with SIN3.1 Publication

Protein-protein interaction databases

BioGridi32220, 85 interactors
DIPiDIP-2486N
IntActiQ12427, 4 interactors
MINTiQ12427
STRINGi4932.YDR169C

Structurei

3D structure databases

ProteinModelPortaliQ12427
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the STB3 family.Curated

Phylogenomic databases

HOGENOMiHOG000065949
InParanoidiQ12427
OMAiESHIRST
OrthoDBiEOG092C4K2G

Family and domain databases

InterProiView protein in InterPro
IPR018818 Stb3
PfamiView protein in Pfam
PF10330 Stb3, 1 hit

Sequencei

Sequence statusi: Complete.

Q12427-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSENQKEVSP PQAISVKSEA SSSIFSKPIS TSSPAGLAAA QRVTPGKLST
60 70 80 90 100
LLLEMGPLAI RHITQTLCLD IPCFKDLSSS KQRRLIMSAM ESGDKEKSVV
110 120 130 140 150
FEKIGWGQWS AKRVDPANFD KELEATNFAN AKVKDLISQE SQRRKSNNSN
160 170 180 190 200
SNSGGKVEMP MKVEHNITNI DGATTPPTAV ASTTIPVNIK RSKSPLAAAN
210 220 230 240 250
VVYIDENALA SEDEDEEFDE DDHHLHYQNK SRNSSNNFGK SSNGDPYSFG
260 270 280 290 300
RRRSQVVFAD STPENIEHEI IAQKIRPLLR NRRRSSIKPH TPFISKLNTH
310 320 330 340 350
QDSSYLSPNT TSTTTPSNNN SNSNQAKIDL EKLTATSEPT SRRASRLSVS
360 370 380 390 400
KESSIRSTLF PNKNYLIVTT NPNSKATSVS TSPKLEEQMN VSSNPIVLSD
410 420 430 440 450
KEKHRVASQH LNGESSPQLV PHSHHQPHSD TDEEDWESIG AASLRNNSLA
460 470 480 490 500
PNIDSVASST NGVVSPKPTN PSFTNSQNGD IEPPLQHDQQ KHEQQPRNGE
510
DNSAAFLLMS LKS
Length:513
Mass (Da):56,264
Last modified:November 1, 1996 - v1
Checksum:i442B5633334B938F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U33440 Genomic DNA Translation: AAA75483.1
Z47813 Genomic DNA Translation: CAA87800.1
BK006938 Genomic DNA Translation: DAA12009.1
PIRiS50915
RefSeqiNP_010453.1, NM_001180476.1

Genome annotation databases

EnsemblFungiiYDR169C; YDR169C; YDR169C
GeneIDi851747
KEGGisce:YDR169C

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U33440 Genomic DNA Translation: AAA75483.1
Z47813 Genomic DNA Translation: CAA87800.1
BK006938 Genomic DNA Translation: DAA12009.1
PIRiS50915
RefSeqiNP_010453.1, NM_001180476.1

3D structure databases

ProteinModelPortaliQ12427
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi32220, 85 interactors
DIPiDIP-2486N
IntActiQ12427, 4 interactors
MINTiQ12427
STRINGi4932.YDR169C

PTM databases

iPTMnetiQ12427

Proteomic databases

MaxQBiQ12427
PaxDbiQ12427
PRIDEiQ12427
TopDownProteomicsiQ12427

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiYDR169C; YDR169C; YDR169C
GeneIDi851747
KEGGisce:YDR169C

Organism-specific databases

SGDiS000002576 STB3

Phylogenomic databases

HOGENOMiHOG000065949
InParanoidiQ12427
OMAiESHIRST
OrthoDBiEOG092C4K2G

Enzyme and pathway databases

BioCyciYEAST:G3O-29758-MONOMER

Miscellaneous databases

PROiPR:Q12427

Family and domain databases

InterProiView protein in InterPro
IPR018818 Stb3
PfamiView protein in Pfam
PF10330 Stb3, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiSTB3_YEAST
AccessioniPrimary (citable) accession number: Q12427
Secondary accession number(s): D6VSE9
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 22, 2005
Last sequence update: November 1, 1996
Last modified: November 7, 2018
This is version 118 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  3. Yeast chromosome IV
    Yeast (Saccharomyces cerevisiae) chromosome IV: entries and gene names
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Main funding by: National Institutes of Health

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