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UniProtKB - Q10LH4 (Q10LH4_ORYSJ)
Protein
Submitted name:
Nucleolar protein NOP5, putative, expressed
Gene
LOC_Os03g22740
Organism
Oryza sativa subsp. japonica (Rice)
Status
Functioni
GO - Molecular functioni
- snoRNA binding Source: GO_Central
GO - Biological processi
- ribosome biogenesis Source: UniProtKB-KW
Keywordsi
Biological process | Ribosome biogenesisARBA annotation |
Names & Taxonomyi
Protein namesi | Submitted name: Nucleolar protein NOP5, putative, expressedImportedSubmitted name: Os03g0350300 proteinImportedSubmitted name: cDNA clone:J033023B01, full insert sequenceImported |
Gene namesi | Ordered Locus Names:LOC_Os03g22740Imported, Os03g0350300Imported ORF Names:OSNPB_030350300Imported |
Organismi | Oryza sativa subsp. japonica (Rice)Imported |
Taxonomic identifieri | 39947 [NCBI] |
Taxonomic lineagei | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliopsida › Liliopsida › Poales › Poaceae › BOP clade › Oryzoideae › Oryzeae › Oryzinae › Oryza › Oryza sativa |
Proteomesi |
|
Subcellular locationi
Nucleus
- nucleolus ARBA annotation
Nucleus
- nucleolus Source: UniProtKB-SubCell
Other locations
- box C/D RNP complex Source: GO_Central
- small-subunit processome Source: GO_Central
Keywords - Cellular componenti
NucleusARBA annotationStructurei
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 281 – 399 | NopInterPro annotationAdd BLAST | 119 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 443 – 568 | DisorderedSequence analysisAdd BLAST | 126 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 453 – 556 | Basic and acidic residuesSequence analysisAdd BLAST | 104 |
Sequence similaritiesi
Belongs to the NOP5/NOP56 family.ARBA annotation
Phylogenomic databases
eggNOGi | KOG2572, Eukaryota |
HOGENOMi | CLU_015495_5_2_1 |
OMAi | MGMRSNW |
OrthoDBi | 632707at2759 |
Family and domain databases
Gene3Di | 1.10.246.90, 1 hit |
InterProi | View protein in InterPro IPR045056, Nop56/Nop58 IPR012974, NOP5_N IPR042239, Nop_C IPR002687, Nop_dom IPR036070, Nop_dom_sf IPR012976, NOSIC |
PANTHERi | PTHR10894, PTHR10894, 1 hit |
Pfami | View protein in Pfam PF01798, Nop, 1 hit PF08156, NOP5NT, 1 hit |
SMARTi | View protein in SMART SM00931, NOSIC, 1 hit |
SUPFAMi | SSF89124, SSF89124, 1 hit |
PROSITEi | View protein in PROSITE PS51358, NOP, 1 hit |
i Sequence
Sequence statusi: Complete.
Q10LH4-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MLVLFETPAG FALFKVLDEG KLDKVEDLWK EFTTSDSARK VVELKAFNKF
60 70 80 90 100
ENTSDALSAA TLIIDSKPTK GLRKFLQKHC EGETLAVADS KLGNAIKEKL
110 120 130 140 150
KIDCLHNSAV MELMRGLRNQ LTELISGLGA QDLGPMSLGL SHSLSRYKLK
160 170 180 190 200
FSPEKVDTMI IQAIGLLDDL DKELNTYAMR VREWYGWHFP ELTKIVADNI
210 220 230 240 250
QYAKVVKMMG DRTNAESLDF SEILSDDEVE AQLKEAAVIS MGTEVSELDL
260 270 280 290 300
LNIRELCDQV LALSEYRAQL FDYLRSRMNT IAPNLTALVG ELVGARLIAH
310 320 330 340 350
GGSLVNLAKQ PGSTIQILGA EKALFRALKT KHATPKYGLI YHASLIGQAA
360 370 380 390 400
PKHKGKISRS LAAKTALAIR YDALGDGEDN SIGLESRVKL ETRLRVLEGK
410 420 430 440 450
ELGRSAGSTK GKPKIEVYEK DRKKGAGALI TPAKTYNPAA DLVLGQSTEE
460 470 480 490 500
TPKKPEGASK KRKHQETEPA PAEKTTKEDG DQEGEKKKKK KKSKESEESP
510 520 530 540 550
AADADGGKKK KKTSKESEEP PVATTEGEKK EKKKKKKSDS QDAEDVAMET
560
EESGKKEKKK KKKHHSDE
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | DP000009 Genomic DNA Translation: ABF95928.1 AK073164 mRNA Translation: BAG93321.1 AP014959 Genomic DNA Translation: BAS84193.1 |
RefSeqi | XP_015630760.1, XM_015775274.1 |
Genome annotation databases
EnsemblPlantsi | Os03t0350300-01; Os03t0350300-01; Os03g0350300 |
GeneIDi | 4332841 |
Gramenei | Os03t0350300-01; Os03t0350300-01; Os03g0350300 |
KEGGi | osa:4332841 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | DP000009 Genomic DNA Translation: ABF95928.1 AK073164 mRNA Translation: BAG93321.1 AP014959 Genomic DNA Translation: BAS84193.1 |
RefSeqi | XP_015630760.1, XM_015775274.1 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
STRINGi | 39947.Q10LH4 |
Genome annotation databases
EnsemblPlantsi | Os03t0350300-01; Os03t0350300-01; Os03g0350300 |
GeneIDi | 4332841 |
Gramenei | Os03t0350300-01; Os03t0350300-01; Os03g0350300 |
KEGGi | osa:4332841 |
Phylogenomic databases
eggNOGi | KOG2572, Eukaryota |
HOGENOMi | CLU_015495_5_2_1 |
OMAi | MGMRSNW |
OrthoDBi | 632707at2759 |
Family and domain databases
Gene3Di | 1.10.246.90, 1 hit |
InterProi | View protein in InterPro IPR045056, Nop56/Nop58 IPR012974, NOP5_N IPR042239, Nop_C IPR002687, Nop_dom IPR036070, Nop_dom_sf IPR012976, NOSIC |
PANTHERi | PTHR10894, PTHR10894, 1 hit |
Pfami | View protein in Pfam PF01798, Nop, 1 hit PF08156, NOP5NT, 1 hit |
SMARTi | View protein in SMART SM00931, NOSIC, 1 hit |
SUPFAMi | SSF89124, SSF89124, 1 hit |
PROSITEi | View protein in PROSITE PS51358, NOP, 1 hit |
MobiDBi | Search... |
Entry informationi
Entry namei | Q10LH4_ORYSJ | |
Accessioni | Q10LH4Primary (citable) accession number: Q10LH4 Secondary accession number(s): Q0DRW1 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | August 22, 2006 |
Last sequence update: | August 22, 2006 | |
Last modified: | May 25, 2022 | |
This is version 113 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |