UniProtKB - Q10587 (TEF_HUMAN)

BLAST

>sp|Q10587|TEF_HUMAN Thyrotroph embryonic factor OS=Homo sapiens OX=9606 GN=TEF PE=1 SV=3
MSDAGGGKKPPVDPQAGPGPGPGRAAGERGLSGSFPLVLKKLMENPPREARLDKEKGKEK
LEEDEAAAASTMAVSASLMPPIWDKTIPYDGESFHLEYMDLDEFLLENGIPASPTHLAHN
LLLPVAELEGKESASSSTASPPSSSTAIFQPSETVSSTESSLEKERETPSPIDPNCVEVD
VNFNPDPADLVLSSVPGGELFNPRKHKFAEEDLKPQPMIKKAKKVFVPDEQKDEKYWTRR
KKNNVAAKRSRDARRLKENQITIRAAFLEKENTALRTEVAELRKEVGKCKTIVSKYETKY
GPL

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History
Entry version 162 (12 Sep 2018)
Sequence version 3 (16 Aug 2004)
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Protein

Thyrotroph embryonic factor

Gene

TEF

Organism

Homo sapiens (Human)

Status

Reviewed-Annotation score: -Experimental evidence at protein levelⁱ

Functionⁱ

Transcription factor that binds to and transactivates the TSHB promoter. Binds to a minimal DNA-binding sequence 5'-[TC][AG][AG]TTA[TC][AG]-3'.

GO - Molecular functionⁱ

RNA polymerase II regulatory region sequence-specific DNA binding Source: GO_Central
RNA polymerase II transcription factor activity, sequence-specific DNA binding Source: NTNU_SB
transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding Source: GO_Central

View the complete GO annotation on QuickGO ...

GO - Biological processⁱ

multicellular organism development Source: GO_Central
regulation of transcription by RNA polymerase II
Source: ProtInc
Traceable author statementⁱ
- 7835883
rhythmic process Source: UniProtKB-KW

View the complete GO annotation on QuickGO ...

Keywordsⁱ

Molecular function	Activator, DNA-binding
Biological process	Biological rhythms, Transcription, Transcription regulation

Enzyme and pathway databases

SignaLinkⁱ	Q10587
SIGNORⁱ	Q10587

Names & Taxonomyⁱ

Protein namesⁱ	Recommended name: Thyrotroph embryonic factor
Gene namesⁱ	Name:TEF Synonyms:KIAA1655
Organismⁱ	Homo sapiens (Human)
Taxonomic identifierⁱ	9606 [NCBI]
Taxonomic lineageⁱ	cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Dipnotetrapodomorpha › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Boreoeutheria › Euarchontoglires › Primates › Haplorrhini › Simiiformes › Catarrhini › Hominoidea › Hominidae › Homininae › Homo
Proteomesⁱ	UP000005640 Componentⁱ: Chromosome 22

Organism-specific databases

EuPathDBⁱ	HostDB:ENSG00000167074.14
Human Gene Nomenclature Database More...HGNCⁱ	HGNC:11722 TEF
MIMⁱ	188595 gene
neXtProtⁱ	NX_Q10587

Keywords - Cellular componentⁱ

Nucleus

Pathology & Biotechⁱ

Organism-specific databases

DisGeNET More...DisGeNETⁱ	7008
Open Targets More...OpenTargetsⁱ	ENSG00000167074
PharmGKBⁱ	PA36439

Polymorphism and mutation databases

BioMutaⁱ	TEF
DMDMⁱ	51338730

PTM / Processingⁱ

Molecule processing

Feature key	Position(s)	DescriptionActions	Graphical view	Length
ChainⁱPRO_0000076512	1 – 303	Thyrotroph embryonic factorAdd BLAST		303

Amino acid modifications

Feature key	Position(s)	DescriptionActions	Graphical view	Length
Modified residueⁱ	32	PhosphoserineCombined sources		1

Keywords - PTMⁱ

Phosphoprotein

Proteomic databases

EPDⁱ	Q10587
PaxDbⁱ	Q10587
PeptideAtlas More...PeptideAtlasⁱ	Q10587
PRIDEⁱ	Q10587
ProteomicsDBⁱ	58863 58864 [Q10587-2]

PTM databases

iPTMnetⁱ	Q10587
PhosphoSitePlusⁱ	Q10587

Expressionⁱ

Inductionⁱ

Accumulates according to a robust circadian rhythm.By similarity

Gene expression databases

Bgeeⁱ	ENSG00000167074 Expressed in 210 organ(s), highest expression level in cerebellar hemisphere
CleanExⁱ	HS_TEF
ExpressionAtlasⁱ	Q10587 baseline and differential
Genevisibleⁱ	Q10587 HS

Interactionⁱ

Subunit structureⁱ

Binds DNA as a homodimer or a heterodimer. Can form a heterodimer with DBP.

Binary interactionsⁱ

With	Entry	#Exp.	IntAct	Notes
MRPL28	Q13084	3	EBI-2796967,EBI-723426

With

Entry

#Exp.

IntAct

Notes

MRPL28

Q13084

EBI-2796967,EBI-723426

Protein-protein interaction databases

BioGridⁱ	112867, 1 interactor
IntActⁱ	Q10587, 31 interactors
STRINGⁱ	9606.ENSP00000266304

Structureⁱ

3D structure databases

ProteinModelPortalⁱ	Q10587
ModBaseⁱ	Search...
MobiDBⁱ	Search...

Family & Domainsⁱ

Domains and Repeats

Feature key	Position(s)	DescriptionActions	Graphical view	Length
Domainⁱ	233 – 296	bZIPPROSITE-ProRule annotationAdd BLAST		64

Region

Feature key	Position(s)	DescriptionActions	Graphical view	Length
Regionⁱ	235 – 255	Basic motifPROSITE-ProRule annotationAdd BLAST		21
Regionⁱ	256 – 263	Leucine-zipperPROSITE-ProRule annotation		8

Compositional bias

Feature key	Position(s)	DescriptionActions	Graphical view	Length
Compositional biasⁱ	166 – 217	Pro-rich (proline/acidic region (PAR))Add BLAST		52

Sequence similaritiesⁱ

Belongs to the bZIP family. PAR subfamily.Curated

Phylogenomic databases

eggNOGⁱ	KOG3119 Eukaryota ENOG410YJ8G LUCA
Ensembl GeneTree More...GeneTreeⁱ	ENSGT00440000039070
HOVERGENⁱ	HBG004983
InParanoidⁱ	Q10587
KEGG Orthology (KO) More...KOⁱ	K09058
OMAⁱ	SKYETRY
Database of Orthologous Groups More...OrthoDBⁱ	EOG091G0EO0
PhylomeDBⁱ	Q10587
TreeFamⁱ	TF315869

Family and domain databases

InterProⁱ	View protein in InterPro IPR004827 bZIP IPR029832 TEF/VBP
PANTHERⁱ	PTHR11988:SF24 PTHR11988:SF24, 1 hit
Pfam protein domain database More...Pfamⁱ	View protein in Pfam PF07716 bZIP_2, 1 hit
SMARTⁱ	View protein in SMART SM00338 BRLZ, 1 hit
PROSITEⁱ	View protein in PROSITE PS50217 BZIP, 1 hit

Sequences (2+)ⁱ

Sequence statusⁱ: Complete.

This entry describes 2 isoformsⁱ produced by alternative splicing. Align Add to basket

This entry has 2 described isoforms and 1 potential isoform that is computationally mapped.Show all Align All

Isoform 1 (identifier: Q10587-1) [UniParc]FASTA Add to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

        10         20         30         40         50
MSDAGGGKKP PVDPQAGPGP GPGRAAGERG LSGSFPLVLK KLMENPPREA 
        60         70         80         90        100
RLDKEKGKEK LEEDEAAAAS TMAVSASLMP PIWDKTIPYD GESFHLEYMD 
       110        120        130        140        150
LDEFLLENGI PASPTHLAHN LLLPVAELEG KESASSSTAS PPSSSTAIFQ 
       160        170        180        190        200
PSETVSSTES SLEKERETPS PIDPNCVEVD VNFNPDPADL VLSSVPGGEL 
       210        220        230        240        250
FNPRKHKFAE EDLKPQPMIK KAKKVFVPDE QKDEKYWTRR KKNNVAAKRS 
       260        270        280        290        300
RDARRLKENQ ITIRAAFLEK ENTALRTEVA ELRKEVGKCK TIVSKYETKY 

GPL

Length:303

Mass (Da):33,248

Last modified:August 16, 2004 - v3

Checksum:ⁱ4A87B7BFA7248C6F

Isoform 2 (identifier: Q10587-2) [UniParc]FASTA Add to basket

The sequence of this isoform differs from the canonical sequence as follows:
1-52: MSDAGGGKKPPVDPQAGPGPGPGRAAGERGLSGSFPLVLKKLMENPPREARL → MDMPEVLKSLLEHSLPWPEKRT

« Hide

        10         20         30         40         50
MDMPEVLKSL LEHSLPWPEK RTDKEKGKEK LEEDEAAAAS TMAVSASLMP 
        60         70         80         90        100
PIWDKTIPYD GESFHLEYMD LDEFLLENGI PASPTHLAHN LLLPVAELEG 
       110        120        130        140        150
KESASSSTAS PPSSSTAIFQ PSETVSSTES SLEKERETPS PIDPNCVEVD 
       160        170        180        190        200
VNFNPDPADL VLSSVPGGEL FNPRKHKFAE EDLKPQPMIK KAKKVFVPDE 
       210        220        230        240        250
QKDEKYWTRR KKNNVAAKRS RDARRLKENQ ITIRAAFLEK ENTALRTEVA 
       260        270 
ELRKEVGKCK TIVSKYETKY GPL

Note: No experimental confirmation available.

Show »

Length:273

Mass (Da):30,635

Checksum:ⁱB1A956839CBC4AC4

Computationally mapped potential isoform sequencesⁱ

There is 1 potential isoform mapped to this entry.BLAST Align Show all Add to basket

	Entry	Entry name		Protein names	Gene names	Length	Annotation

	H0Y797	H0Y797_HUMAN		Thyrotroph embryonic factor Thyrotroph embryonic factor	TEF	184	Annotation score:

Sequence cautionⁱ

The sequence AAA81373 differs from that shown. Reason: Erroneous initiation.Curated

Experimental Info

Feature key	Position(s)	DescriptionActions	Graphical view	Length
Sequence conflictⁱ	54	K → E in AAA81373 (PubMed:7835883).Curated		1

Alternative sequence

Feature key	Position(s)	DescriptionActions	Graphical view	Length
Alternative sequenceⁱVSP_041376	1 – 52	MSDAG…REARL → MDMPEVLKSLLEHSLPWPEK RT in isoform 2. 1 PublicationAdd BLAST		52

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	U06935 mRNA Translation: AAA81373.1 Different initiation. U44059 mRNA Translation: AAB06497.1 CR456592 mRNA Translation: CAG30478.1 CR541827 mRNA Translation: CAG46626.1 AK091916 mRNA Translation: BAG52441.1 AK314906 mRNA Translation: BAG37419.1 AL035659 Genomic DNA No translation available. CH471095 Genomic DNA Translation: EAW60430.1 CH471095 Genomic DNA Translation: EAW60431.1 BC039258 mRNA Translation: AAH39258.1 BC042476 mRNA Translation: AAH42476.1 BX537848 mRNA Translation: CAD97856.1
The Consensus CDS (CCDS) project More...CCDSⁱ	CCDS14014.1 [Q10587-1] CCDS46716.1 [Q10587-2]
PIRⁱ	G02360
NCBI Reference Sequences More...RefSeqⁱ	NP_001138870.1, NM_001145398.2 [Q10587-2] NP_003207.1, NM_003216.3 [Q10587-1]
UniGeneⁱ	Hs.181159

Genome annotation databases

Ensemblⁱ	ENST00000266304; ENSP00000266304; ENSG00000167074 [Q10587-1] ENST00000406644; ENSP00000385256; ENSG00000167074 [Q10587-2]
GeneIDⁱ	7008
KEGGⁱ	hsa:7008
UCSC genome browser More...UCSCⁱ	uc003azx.5 human [Q10587-1]

Keywords - Coding sequence diversityⁱ

Alternative splicing

Similar proteinsⁱ

100% Identity
90% Identity
50% Identity

Protein	Similar proteins		Species	Score	Length	Source
Q10587	TEF isoform 1		PANTR		303	UniRef100_Q10587
Thyrotroph embryonic factor isoform 1		MACMU		303
TEF isoform 1		PONAB		303
Uncharacterized protein		CERAT		303
TEF, PAR bZIP transcription factor		GORGO		303
+5
Q10587-2	Uncharacterized protein		PAPAN		287	UniRef100_A0A2I3LL92
TEF isoform 2		PANTR		273
TEF, PAR bZIP transcription factor		CALJA		273
TEF isoform 2		PONAB		273
Thyrotroph embryonic factor isoform 2		MACMU		273
+5

Protein	Similar proteins		Species	Score	Length	Source
Q10587	Thyrotroph embryonic factor		RAT		301	UniRef90_P41224
Thyrotroph embryonic factor		MOUSE		301
TEF, PAR bZIP transcription factor		CANLF		311
TEF, PAR bZIP transcription factor		BOVIN		310
Thyrotroph embryonic factor isoform 1 (Fragment)		SHEEP		52
+112
Q10587-2	Isoform Beta of Thyrotroph embryonic factor		MOUSE		285	UniRef90_Q9JLC6-2
TEF, PAR bZIP transcription factor		CANLF		347
Uncharacterized protein		PROCO		288
Uncharacterized protein		PAPAN		287
TEF isoform 2		PANTR		273
+92

Protein	Similar proteins		Species	Score	Length	Source
Q10587	Thyrotroph embryonic factor		RAT		301	UniRef50_P41224
Thyrotroph embryonic factor		MOUSE		301
TEF, PAR bZIP transcription factor		CANLF		311
TEF, PAR bZIP transcription factor		BOVIN		310
Thyrotroph embryonic factor isoform 1 (Fragment)		SHEEP		52
+147
Q10587-2	Transcription factor VBP		CHICK		319	UniRef50_Q92172
Thyrotroph embryonic factor		Patagioenas fasciata monilis		319
Transcription factor VBP		Bengalese finch		270
TEF, PAR bZIP transcription factor		RABIT		346
Uncharacterized protein		SARHA		285
+160

Cross-referencesⁱ

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	U06935 mRNA Translation: AAA81373.1 Different initiation. U44059 mRNA Translation: AAB06497.1 CR456592 mRNA Translation: CAG30478.1 CR541827 mRNA Translation: CAG46626.1 AK091916 mRNA Translation: BAG52441.1 AK314906 mRNA Translation: BAG37419.1 AL035659 Genomic DNA No translation available. CH471095 Genomic DNA Translation: EAW60430.1 CH471095 Genomic DNA Translation: EAW60431.1 BC039258 mRNA Translation: AAH39258.1 BC042476 mRNA Translation: AAH42476.1 BX537848 mRNA Translation: CAD97856.1
CCDSⁱ	CCDS14014.1 [Q10587-1] CCDS46716.1 [Q10587-2]
PIRⁱ	G02360
RefSeqⁱ	NP_001138870.1, NM_001145398.2 [Q10587-2] NP_003207.1, NM_003216.3 [Q10587-1]
UniGeneⁱ	Hs.181159

3D structure databases

ProteinModelPortalⁱ	Q10587
ModBaseⁱ	Search...
MobiDBⁱ	Search...

Protein-protein interaction databases

BioGridⁱ	112867, 1 interactor
IntActⁱ	Q10587, 31 interactors
STRINGⁱ	9606.ENSP00000266304

PTM databases

iPTMnetⁱ	Q10587
PhosphoSitePlusⁱ	Q10587

Polymorphism and mutation databases

BioMutaⁱ	TEF
DMDMⁱ	51338730

Proteomic databases

EPDⁱ	Q10587
PaxDbⁱ	Q10587
PeptideAtlasⁱ	Q10587
PRIDEⁱ	Q10587
ProteomicsDBⁱ	58863 58864 [Q10587-2]

Protocols and materials databases

The DNASU plasmid repository More...DNASUⁱ	7008
Structural Biology Knowledgebase	Search...

Genome annotation databases

Ensemblⁱ	ENST00000266304; ENSP00000266304; ENSG00000167074 [Q10587-1] ENST00000406644; ENSP00000385256; ENSG00000167074 [Q10587-2]
GeneIDⁱ	7008
KEGGⁱ	hsa:7008
UCSCⁱ	uc003azx.5 human [Q10587-1]

Organism-specific databases

CTDⁱ	7008
DisGeNETⁱ	7008
EuPathDBⁱ	HostDB:ENSG00000167074.14
GeneCardsⁱ	TEF
HGNCⁱ	HGNC:11722 TEF
MIMⁱ	188595 gene
neXtProtⁱ	NX_Q10587
OpenTargetsⁱ	ENSG00000167074
PharmGKBⁱ	PA36439
HUGEⁱ	Search...
GenAtlas: human gene database More...GenAtlasⁱ	Search...

Phylogenomic databases

eggNOGⁱ	KOG3119 Eukaryota ENOG410YJ8G LUCA
GeneTreeⁱ	ENSGT00440000039070
HOVERGENⁱ	HBG004983
InParanoidⁱ	Q10587
KOⁱ	K09058
OMAⁱ	SKYETRY
OrthoDBⁱ	EOG091G0EO0
PhylomeDBⁱ	Q10587
TreeFamⁱ	TF315869

Enzyme and pathway databases

SignaLinkⁱ	Q10587
SIGNORⁱ	Q10587

Miscellaneous databases

ChiTaRSⁱ	TEF human
GeneWikiⁱ	TEF_(gene)
GenomeRNAiⁱ	7008
Protein Ontology More...PROⁱ	PR:Q10587
SOURCEⁱ	Search...

Gene expression databases

Bgeeⁱ	ENSG00000167074 Expressed in 210 organ(s), highest expression level in cerebellar hemisphere
CleanExⁱ	HS_TEF
ExpressionAtlasⁱ	Q10587 baseline and differential
Genevisibleⁱ	Q10587 HS

Family and domain databases

InterProⁱ	View protein in InterPro IPR004827 bZIP IPR029832 TEF/VBP
PANTHERⁱ	PTHR11988:SF24 PTHR11988:SF24, 1 hit
Pfamⁱ	View protein in Pfam PF07716 bZIP_2, 1 hit
SMARTⁱ	View protein in SMART SM00338 BRLZ, 1 hit
PROSITEⁱ	View protein in PROSITE PS50217 BZIP, 1 hit
ProtoNetⁱ	Search...

Entry informationⁱ

Entry nameⁱ	TEF_HUMAN
Accessionⁱ	Q10587Primary (citable) accession number: Q10587 Secondary accession number(s): B0QYS8 , B2RC22, Q15729, Q7Z3J7, Q8IU94, Q96TG4
Entry historyⁱ	Integrated into UniProtKB/Swiss-Prot:	October 1, 1996
	Last sequence update:	August 16, 2004
	Last modified:	September 12, 2018
	This is version 162 of the entry and version 3 of the sequence. See complete history.
Entry statusⁱ	Reviewed (UniProtKB/Swiss-Prot)
Annotation program	Chordata Protein Annotation Program
Disclaimer	Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousⁱ

Keywords - Technical termⁱ

Complete proteome, Reference proteome

Documents

SIMILARITY comments
Index of protein domains and families
MIM cross-references
Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
Human chromosome 22
Human chromosome 22: entries, gene names and cross-references to MIM

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Supporting data

UniProtKB - Q10587 (TEF_HUMAN)

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Thyrotroph embryonic factor

TEF

Select a section on the left to see content.

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

Enzyme and pathway databases

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

Organism-specific databases

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Nucleus

Nucleus

Keywords - Cellular componenti

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

Organism-specific databases

Polymorphism and mutation databases

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Amino acid modifications

Keywords - PTMi

Proteomic databases

PTM databases

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Region

Compositional bias

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Phylogenomic databases

Family and domain databases

<p>This subsection of the ‘Sequence’ section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

Experimental Info

Alternative sequence

Sequence databases

Genome annotation databases

Keywords - Coding sequence diversityi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

3D structure databases

Protein-protein interaction databases

PTM databases

Polymorphism and mutation databases

Proteomic databases

Protocols and materials databases

Genome annotation databases

Organism-specific databases

Phylogenomic databases

Enzyme and pathway databases

Miscellaneous databases

Gene expression databases

Family and domain databases

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Documents

UniProt is an ELIXIR core data resource

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Functionⁱ

GO - Molecular functionⁱ

GO - Biological processⁱ

Names & Taxonomyⁱ

Subcellular locationⁱ

Keywords - Cellular componentⁱ

Pathology & Biotechⁱ

PTM / Processingⁱ

Keywords - PTMⁱ

Expressionⁱ

Interactionⁱ

Structureⁱ

Family & Domainsⁱ

Sequence similaritiesⁱ

Sequence cautionⁱ

Keywords - Coding sequence diversityⁱ

Cross-referencesⁱ

Entry informationⁱ

Miscellaneousⁱ

Keywords - Technical termⁱ