UniProtKB - Q0WYX8 (MDGA1_CHICK)
Protein
MAM domain-containing glycosylphosphatidylinositol anchor protein 1
Gene
MDGA1
Organism
Gallus gallus (Chicken)
Status
Functioni
Required for radial migration of cortical neurons in the superficial layer of the neocortex.By similarity
GO - Biological processi
- neuron migration Source: UniProtKB
Keywordsi
Molecular function | Developmental protein |
Biological process | Differentiation, Neurogenesis |
Names & Taxonomyi
Protein namesi | Recommended name: MAM domain-containing glycosylphosphatidylinositol anchor protein 1 |
Gene namesi | Name:MDGA1Imported |
Organismi | Gallus gallus (Chicken) |
Taxonomic identifieri | 9031 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Archelosauria › Archosauria › Dinosauria › Saurischia › Theropoda › Coelurosauria › Aves › Neognathae › Galloanserae › Galliformes › Phasianidae › Phasianinae › Gallus |
Proteomesi |
|
Subcellular locationi
Plasma membrane
- Cell membrane 1 Publication; GPI-anchor 1 Publication
Note: Associated with lipid rafts.By similarity1 Publication
Plasma Membrane
- anchored component of plasma membrane Source: UniProtKB
Keywords - Cellular componenti
Cell membrane, MembranePTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Signal peptidei | 1 – 18 | Sequence analysisAdd BLAST | 18 | |
ChainiPRO_0000292930 | 19 – 926 | MAM domain-containing glycosylphosphatidylinositol anchor protein 1Sequence analysisAdd BLAST | 908 | |
PropeptideiPRO_0000292931 | 927 – 949 | Removed in mature formSequence analysisAdd BLAST | 23 |
Amino acid modifications
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Glycosylationi | 42 | N-linked (GlcNAc...) asparagineSequence analysis | 1 | |
Disulfide bondi | 60 ↔ 108 | PROSITE-ProRule annotation | ||
Glycosylationi | 90 | N-linked (GlcNAc...) asparagineSequence analysis | 1 | |
Disulfide bondi | 157 ↔ 214 | PROSITE-ProRule annotation | ||
Glycosylationi | 235 | N-linked (GlcNAc...) asparagineSequence analysis | 1 | |
Glycosylationi | 247 | N-linked (GlcNAc...) asparagineSequence analysis | 1 | |
Glycosylationi | 257 | N-linked (GlcNAc...) asparagineSequence analysis | 1 | |
Disulfide bondi | 262 ↔ 308 | PROSITE-ProRule annotation | ||
Glycosylationi | 292 | N-linked (GlcNAc...) asparagineSequence analysis | 1 | |
Glycosylationi | 307 | N-linked (GlcNAc...) asparagineSequence analysis | 1 | |
Glycosylationi | 331 | N-linked (GlcNAc...) asparagineSequence analysis | 1 | |
Disulfide bondi | 357 ↔ 415 | PROSITE-ProRule annotation | ||
Glycosylationi | 432 | N-linked (GlcNAc...) asparagineSequence analysis | 1 | |
Disulfide bondi | 463 ↔ 513 | PROSITE-ProRule annotation | ||
Disulfide bondi | 559 ↔ 609 | PROSITE-ProRule annotation | ||
Glycosylationi | 577 | N-linked (GlcNAc...) asparagineSequence analysis | 1 | |
Glycosylationi | 649 | N-linked (GlcNAc...) asparagineSequence analysis | 1 | |
Glycosylationi | 820 | N-linked (GlcNAc...) asparagineSequence analysis | 1 | |
Lipidationi | 926 | GPI-anchor amidated serineSequence analysis | 1 |
Keywords - PTMi
Disulfide bond, Glycoprotein, GPI-anchor, LipoproteinProteomic databases
PaxDbi | Q0WYX8 |
Expressioni
Tissue specificityi
In the embryonic brachial spinal cord, selectively expressed by medial lateral motor column neurons, some populations of dorsal root ganglion neurons, and interneurons.1 Publication
Interactioni
Subunit structurei
Interacts heterophilically through its MAM domain with proteins in axon-rich regions and through its Ig-like domains with proteins in differentiating muscle.
1 PublicationProtein-protein interaction databases
STRINGi | 9031.ENSGALP00000016475 |
Structurei
Secondary structure
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details3D structure databases
SMRi | Q0WYX8 |
ModBasei | Search... |
PDBe-KBi | Search... |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 24 – 125 | Ig-like 1Sequence analysisAdd BLAST | 102 | |
Domaini | 132 – 230 | Ig-like 2Sequence analysisAdd BLAST | 99 | |
Domaini | 240 – 323 | Ig-like 3Sequence analysisAdd BLAST | 84 | |
Domaini | 338 – 432 | Ig-like 4Sequence analysisAdd BLAST | 95 | |
Domaini | 440 – 531 | Ig-like 5Sequence analysisAdd BLAST | 92 | |
Domaini | 537 – 625 | Ig-like 6Sequence analysisAdd BLAST | 89 | |
Domaini | 637 – 737 | Fibronectin type-IIIPROSITE-ProRule annotationAdd BLAST | 101 | |
Domaini | 745 – 912 | MAMPROSITE-ProRule annotationAdd BLAST | 168 |
Keywords - Domaini
Immunoglobulin domain, Repeat, SignalPhylogenomic databases
eggNOGi | ENOG502QUWH, Eukaryota |
InParanoidi | Q0WYX8 |
PhylomeDBi | Q0WYX8 |
Family and domain databases
CDDi | cd06263, MAM, 1 hit |
Gene3Di | 2.60.40.10, 7 hits |
InterProi | View protein in InterPro IPR013320, ConA-like_dom_sf IPR003961, FN3_dom IPR036116, FN3_sf IPR007110, Ig-like_dom IPR036179, Ig-like_dom_sf IPR013783, Ig-like_fold IPR003599, Ig_sub IPR003598, Ig_sub2 IPR000998, MAM_dom |
Pfami | View protein in Pfam PF00629, MAM, 1 hit |
PRINTSi | PR00020, MAMDOMAIN |
SMARTi | View protein in SMART SM00409, IG, 6 hits SM00408, IGc2, 6 hits SM00137, MAM, 1 hit |
SUPFAMi | SSF48726, SSF48726, 6 hits SSF49265, SSF49265, 1 hit SSF49899, SSF49899, 1 hit |
PROSITEi | View protein in PROSITE PS50853, FN3, 1 hit PS50835, IG_LIKE, 6 hits PS50060, MAM_2, 1 hit |
i Sequence
Sequence statusi: Complete.
: The displayed sequence is further processed into a mature form. Sequence processingi
Q0WYX8-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MEMICVLFLS LVPAYSRGQG VYAPAQAQII HAGQACVVKE DNISERVYTI
60 70 80 90 100
REGDTLVLQC LVTGHPRPQV RWTKTAGSAS DKFQETSVLN ETLRIEKIQR
110 120 130 140 150
LQGGRYYCKA ENGVGVPAIR SIRVDVQYLD EPVLTVHQTI SDVRGSFYQE
160 170 180 190 200
KTVFLRCTVN SNPPARFIWK RGAETLSHSQ DNGVDIYEPL YTQGETKVLK
210 220 230 240 250
LKNLRPQDYA SYTCQVSVRN VCSIPDKSIT FQLTNTTAPP ALKLSVNETL
260 270 280 290 300
VVNPGDNVTM QCSLTGGDPQ PEVLWSHSPG PLPPNSLVQG GNLTIWRIRV
310 320 330 340 350
EDSGYYNCTA INNVGNPAKK TVNLLVRSMK NATFQITPDV IKESETIQLG
360 370 380 390 400
QDLKLSCHVD AVPQEKVVYS WYKNGKPARF SDRLLITRND PELPPVTCSL
410 420 430 440 450
EIIDLRFSDY GTYLCVATFQ GAPIPDLSVE VNISSETVPP TISVPKGQST
460 470 480 490 500
ITVREGSRAE LQCEVRGKPK PPIIWSRVDK ETPMPSGTMT VETYDGKLRL
510 520 530 540 550
ESVSRDMSGT YKCQTARYNG FNIRPREALV QLNVQFPPVV EPAFQDVRQG
560 570 580 590 600
MGRSVTLRCT MLKGSPMKVA TSVWRFNGTL LAQPPAEQQD YSELKVDSVS
610 620 630 640 650
RETSGSYECS ISNDVGVSAC LFQVSAKAYS PEFYYDTPNP TLSQKQSKNY
660 670 680 690 700
SYILQWTQKE PDAVDPILKY RLEVRQLAQR NTIQTFIPVQ KMEKGLLLEH
710 720 730 740 750
ILPNLKVPQS YEVRLTPITS FGAGDMAARI IRYMEPINYP SPTDNTCRFE
760 770 780 790 800
DEKICGFVQD KMDNFDWTRQ NALTQNPKRT VNTGPPTDIS GTPEGYYMFI
810 820 830 840 850
EASRPRVTGD KARLISPLYN ITAKYYCVSF YYHMYGKHIG SLNLLVRVRN
860 870 880 890 900
KRAIDTQVWS LSGNRGNMWQ QAHVPINPPG PFQIIFEGVR GTSYEGDIAI
910 920 930 940
DDVTLKKGDC PRKPIGPNKA VALPGSGVSA QHGPCLCGPL TFFLYVLLR
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AB241390 mRNA Translation: BAE98269.1 |
RefSeqi | NP_001038112.1, NM_001044647.1 |
Genome annotation databases
GeneIDi | 421431 |
KEGGi | gga:421431 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AB241390 mRNA Translation: BAE98269.1 |
RefSeqi | NP_001038112.1, NM_001044647.1 |
3D structure databases
Select the link destinations: PDBei RCSB PDBi PDBji Links Updated | PDB entry | Method | Resolution (Å) | Chain | Positions | PDBsum |
5OJ2 | X-ray | 3.20 | A/B | 19-919 | [»] | |
5OJ6 | X-ray | 3.30 | B | 19-919 | [»] | |
SMRi | Q0WYX8 | |||||
ModBasei | Search... | |||||
PDBe-KBi | Search... |
Protein-protein interaction databases
STRINGi | 9031.ENSGALP00000016475 |
Proteomic databases
PaxDbi | Q0WYX8 |
Genome annotation databases
GeneIDi | 421431 |
KEGGi | gga:421431 |
Organism-specific databases
CTDi | 266727 |
Phylogenomic databases
eggNOGi | ENOG502QUWH, Eukaryota |
InParanoidi | Q0WYX8 |
PhylomeDBi | Q0WYX8 |
Miscellaneous databases
PROi | PR:Q0WYX8 |
Family and domain databases
CDDi | cd06263, MAM, 1 hit |
Gene3Di | 2.60.40.10, 7 hits |
InterProi | View protein in InterPro IPR013320, ConA-like_dom_sf IPR003961, FN3_dom IPR036116, FN3_sf IPR007110, Ig-like_dom IPR036179, Ig-like_dom_sf IPR013783, Ig-like_fold IPR003599, Ig_sub IPR003598, Ig_sub2 IPR000998, MAM_dom |
Pfami | View protein in Pfam PF00629, MAM, 1 hit |
PRINTSi | PR00020, MAMDOMAIN |
SMARTi | View protein in SMART SM00409, IG, 6 hits SM00408, IGc2, 6 hits SM00137, MAM, 1 hit |
SUPFAMi | SSF48726, SSF48726, 6 hits SSF49265, SSF49265, 1 hit SSF49899, SSF49899, 1 hit |
PROSITEi | View protein in PROSITE PS50853, FN3, 1 hit PS50835, IG_LIKE, 6 hits PS50060, MAM_2, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | MDGA1_CHICK | |
Accessioni | Q0WYX8Primary (citable) accession number: Q0WYX8 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | June 26, 2007 |
Last sequence update: | September 5, 2006 | |
Last modified: | October 7, 2020 | |
This is version 75 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Chordata Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
3D-structure, Reference proteomeDocuments
- PDB cross-references
Index of Protein Data Bank (PDB) cross-references