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Entry version 70 (16 Oct 2019)
Sequence version 1 (05 Sep 2006)
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Protein

Filament-like plant protein 4

Gene

FPP4

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score:

Annotation score:3 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Filament-like plant protein 4
Short name:
AtFPP4
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:FPP4
Ordered Locus Names:At1g19835
ORF Names:F6F9.12
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiArabidopsis thaliana (Mouse-ear cress)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri3702 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliopsidaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000006548 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 1

Organism-specific databases

Arabidopsis Information Portal

More...
Araporti
AT1G19835

The Arabidopsis Information Resource

More...
TAIRi
locus:2824556 AT1G19835

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00003472021 – 982Filament-like plant protein 4Add BLAST982

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q0WSY2

PRoteomics IDEntifications database

More...
PRIDEi
Q0WSY2

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q0WSY2

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
Q0WSY2 baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q0WSY2 AT

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction_section">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function_section">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Interacts with WPP/MAF proteins.

By similarity

GO - Molecular functioni

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGrid)

More...
BioGridi
23810, 2 interactors

Protein interaction database and analysis system

More...
IntActi
Q0WSY2, 1 interactor

STRING: functional protein association networks

More...
STRINGi
3702.AT1G19835.1

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q0WSY2

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and domains’ section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili39 – 83Sequence analysisAdd BLAST45
Coiled coili125 – 291Sequence analysisAdd BLAST167
Coiled coili345 – 401Sequence analysisAdd BLAST57
Coiled coili452 – 475Sequence analysisAdd BLAST24
Coiled coili722 – 885Sequence analysisAdd BLAST164

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi926 – 962Ser-richAdd BLAST37

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the FPP family.Curated

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini

Coiled coil

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
ENOG410IID0 Eukaryota
ENOG410YCYU LUCA

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
HOG000243346

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q0WSY2

Identification of Orthologs from Complete Genome Data

More...
OMAi
KTTVRIC

Database of Orthologous Groups

More...
OrthoDBi
240441at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q0WSY2

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR008587 FPP_plant

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF05911 FPP, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

Q0WSY2-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MDRKSWPWKK KSSEKTATVT EVVDQENGKK PSYIQISFDQ YTNLNGLKDE
60 70 80 90 100
VKSYEEKVTK LEDQIKDLDL KLSTANADIV AKEVLVKQHS KVAEEAVTGW
110 120 130 140 150
EKAEAEASAL KTHLETITLA KLTVEDRAAH LDGALKECMR QIRSLKEENE
160 170 180 190 200
QKLHDVIATK TNQMDNLRAE FESRIGEYEE ELLRCGAEND ALSRSLQERS
210 220 230 240 250
NMLMRISEEK SQAESEIEHL KNNIESCERE INTLKYETHV ITKELEIRNE
260 270 280 290 300
EKNMSMRSAE AANKQHLEGV KKIAKLEAEC QRLRTLVRKK LPGPAALAQM
310 320 330 340 350
KMEVESLGFG DHRQDHRQRR SPVRPSSPLM SPMSHMSQVS EFSLDNMQKF
360 370 380 390 400
HKENDLLTER LLAMEEETKM LKEALAKRNS ELQVSRNLCA KTANRLQTLE
410 420 430 440 450
AQMMSKSPTK RGFEMPAEIF SRQNASNPPS MASMSEDGNE DARSVAGSLM
460 470 480 490 500
SELSQSNKDK ANAKIKKTES ANQLELMDDF LEMEKLACLP NGSNANGSTD
510 520 530 540 550
HSSADSDAEI PPATQLKKRI SNVLQSLPKD AAFEKILAEI QCAVKDAGVK
560 570 580 590 600
LPSKSHGANL NGLTEEKVIA MSNETTEEKV TIVEVITQEL SDALSQIYQF
610 620 630 640 650
VTYLSKEATA CSENRTFSQK VQEFSTTFEG VLGKEKTLVD FLFDLSRVLV
660 670 680 690 700
EASELKIDVL GFHTSTVEIH SPDCIDKVAL PENKALQKDS SGEHYQNGCS
710 720 730 740 750
QSSDSEIPDD CNGTSGYEPK LATCKFTTEE FEGLKLEKEK AESNLASCEA
760 770 780 790 800
DLEATKTKLQ ETEKLLAEVK SDLESAQKSN GMGETQLKCM VESYRSLETR
810 820 830 840 850
SSELEIELTS LKGKIENLED ELHDEKENHR EALAKCQELE EQLQRNNQNC
860 870 880 890 900
PNCSVIEDDP KSKQDNELAA AAEKLAECQE TILLLGKQLK SMCPQTEQVA
910 920 930 940 950
SSPSQEQQAL NPEEEEYATS TNPQDSKLSS PSDKDTPSMN TMKSPVASKH
960 970 980
RHTKSNSSSS SSGLTPEKHS RGFSRFFSTK AK
Length:982
Mass (Da):109,812
Last modified:September 5, 2006 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i91BFA1CD8513E24F
GO

<p>This subsection of the ‘Sequence’ section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence AAG12549 differs from that shown. Reason: Erroneous gene model prediction.Curated

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AC007797 Genomic DNA Translation: AAG12549.1 Sequence problems.
CP002684 Genomic DNA Translation: AEE29903.1
CP002684 Genomic DNA Translation: AEE29904.1
CP002684 Genomic DNA Translation: ANM58666.1
CP002684 Genomic DNA Translation: ANM58667.1
CP002684 Genomic DNA Translation: ANM58668.1
CP002684 Genomic DNA Translation: ANM58669.1
AK222122 mRNA Translation: BAD95104.1
AK227784 mRNA Translation: BAE99766.1

Protein sequence database of the Protein Information Resource

More...
PIRi
E86331

NCBI Reference Sequences

More...
RefSeqi
NP_001185042.1, NM_001198113.1
NP_001319045.1, NM_001332410.1
NP_001321083.1, NM_001332412.1
NP_001321084.1, NM_001332413.1
NP_001321085.1, NM_001332411.1
NP_173412.1, NM_101838.3

Genome annotation databases

Ensembl plant genome annotation project

More...
EnsemblPlantsi
AT1G19835.1; AT1G19835.1; AT1G19835
AT1G19835.2; AT1G19835.2; AT1G19835
AT1G19835.3; AT1G19835.3; AT1G19835
AT1G19835.4; AT1G19835.4; AT1G19835
AT1G19835.5; AT1G19835.5; AT1G19835
AT1G19835.6; AT1G19835.6; AT1G19835

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
838571

Gramene; a comparative resource for plants

More...
Gramenei
AT1G19835.1; AT1G19835.1; AT1G19835
AT1G19835.2; AT1G19835.2; AT1G19835
AT1G19835.3; AT1G19835.3; AT1G19835
AT1G19835.4; AT1G19835.4; AT1G19835
AT1G19835.5; AT1G19835.5; AT1G19835
AT1G19835.6; AT1G19835.6; AT1G19835

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
ath:AT1G19835

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC007797 Genomic DNA Translation: AAG12549.1 Sequence problems.
CP002684 Genomic DNA Translation: AEE29903.1
CP002684 Genomic DNA Translation: AEE29904.1
CP002684 Genomic DNA Translation: ANM58666.1
CP002684 Genomic DNA Translation: ANM58667.1
CP002684 Genomic DNA Translation: ANM58668.1
CP002684 Genomic DNA Translation: ANM58669.1
AK222122 mRNA Translation: BAD95104.1
AK227784 mRNA Translation: BAE99766.1
PIRiE86331
RefSeqiNP_001185042.1, NM_001198113.1
NP_001319045.1, NM_001332410.1
NP_001321083.1, NM_001332412.1
NP_001321084.1, NM_001332413.1
NP_001321085.1, NM_001332411.1
NP_173412.1, NM_101838.3

3D structure databases

SMRiQ0WSY2
ModBaseiSearch...

Protein-protein interaction databases

BioGridi23810, 2 interactors
IntActiQ0WSY2, 1 interactor
STRINGi3702.AT1G19835.1

PTM databases

iPTMnetiQ0WSY2

Proteomic databases

PaxDbiQ0WSY2
PRIDEiQ0WSY2

Genome annotation databases

EnsemblPlantsiAT1G19835.1; AT1G19835.1; AT1G19835
AT1G19835.2; AT1G19835.2; AT1G19835
AT1G19835.3; AT1G19835.3; AT1G19835
AT1G19835.4; AT1G19835.4; AT1G19835
AT1G19835.5; AT1G19835.5; AT1G19835
AT1G19835.6; AT1G19835.6; AT1G19835
GeneIDi838571
GrameneiAT1G19835.1; AT1G19835.1; AT1G19835
AT1G19835.2; AT1G19835.2; AT1G19835
AT1G19835.3; AT1G19835.3; AT1G19835
AT1G19835.4; AT1G19835.4; AT1G19835
AT1G19835.5; AT1G19835.5; AT1G19835
AT1G19835.6; AT1G19835.6; AT1G19835
KEGGiath:AT1G19835

Organism-specific databases

AraportiAT1G19835
TAIRilocus:2824556 AT1G19835

Phylogenomic databases

eggNOGiENOG410IID0 Eukaryota
ENOG410YCYU LUCA
HOGENOMiHOG000243346
InParanoidiQ0WSY2
OMAiKTTVRIC
OrthoDBi240441at2759
PhylomeDBiQ0WSY2

Miscellaneous databases

Protein Ontology

More...
PROi
PR:Q0WSY2

Gene expression databases

ExpressionAtlasiQ0WSY2 baseline and differential
GenevisibleiQ0WSY2 AT

Family and domain databases

InterProiView protein in InterPro
IPR008587 FPP_plant
PfamiView protein in Pfam
PF05911 FPP, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiFPP4_ARATH
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q0WSY2
Secondary accession number(s): Q56WC1, Q9FXI1
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 2, 2008
Last sequence update: September 5, 2006
Last modified: October 16, 2019
This is version 70 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
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