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Protein
Submitted name:

Uncharacterized protein

Gene

mgc146443

Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:mgc146443Imported
Synonyms:MGC146443Imported, rnaseh1Imported
OrganismiXenopus tropicalis (Western clawed frog) (Silurana tropicalis)Imported
Taxonomic identifieri8364 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusSilurana
Proteomesi
  • UP000008143 Componenti: Unassembled WGS sequence

Organism-specific databases

XenbaseiXB-GENE-5770400 mgc146443
XB-GENE-1011883 rnaseh1

Expressioni

Gene expression databases

BgeeiENSXETG00000001212 Expressed in 11 organ(s), highest expression level in testis

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini57 – 203RNase HInterPro annotationAdd BLAST147

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili101 – 121Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

GeneTreeiENSGT00390000003466
HOVERGENiHBG002135
KOiK03469
OMAiELWYGLY

Family and domain databases

Gene3Di3.30.420.10, 1 hit
3.40.970.10, 1 hit
InterProiView protein in InterPro
IPR009027 Ribosomal_L9/RNase_H1_N
IPR011320 RNase_H1_N
IPR037056 RNase_H1_N_sf
IPR012337 RNaseH-like_sf
IPR002156 RNaseH_domain
IPR036397 RNaseH_sf
PfamiView protein in Pfam
PF01693 Cauli_VI, 1 hit
PF00075 RNase_H, 1 hit
SUPFAMiSSF53098 SSF53098, 1 hit
SSF55658 SSF55658, 1 hit
PROSITEiView protein in PROSITE
PS50879 RNASE_H, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.iShow all

Q0V9P2-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MPYGVRRGRQ AGVYNTWEEC KEQVDRYPNA SFKKLPTHSE ARNYVRSHET
60 70 80 90 100
SSPYSSAGRS AQVYTDGCCS RNGQYGANGG IGVYWGPGDS RNVSAKLEGR
110 120 130 140 150
QTNQRAEIEA ARTAVKQARD DNITSLQINT DSKFTINGMT QWVPKWKENG
160 170 180 190 200
WKTVDGRDVI NKQDFQKLDK ACENMDIRWN YVPGHSGSVG NDRADQLAKA

GSRK
Length:204
Mass (Da):22,859
Last modified:September 5, 2006 - v1
Checksum:i5F04874443831249
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
F7BUX9F7BUX9_XENTR
Ribonuclease H1
rnaseh1
294Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAMC01040413 Genomic DNA No translation available.
AAMC01040414 Genomic DNA No translation available.
AAMC01040415 Genomic DNA No translation available.
AAMC01040416 Genomic DNA No translation available.
BC121449 mRNA Translation: AAI21450.1
RefSeqiNP_001072354.1, NM_001078886.1
XP_012818597.1, XM_012963143.1
UniGeneiStr.66547

Genome annotation databases

EnsembliENSXETT00000061145; ENSXETP00000061828; ENSXETG00000001212
GeneIDi779807
KEGGixtr:779807

Similar proteinsi

Entry informationi

Entry nameiQ0V9P2_XENTR
AccessioniPrimary (citable) accession number: Q0V9P2
Entry historyiIntegrated into UniProtKB/TrEMBL: September 5, 2006
Last sequence update: September 5, 2006
Last modified: September 12, 2018
This is version 79 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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