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Entry version 69 (12 Aug 2020)
Sequence version 2 (08 Apr 2008)
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Protein

U3 small nucleolar RNA-associated protein 10

Gene

UTP10

Organism
Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) (Glume blotch fungus) (Parastagonospora nodorum)
Status
Reviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein inferred from homologyi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Involved in nucleolar processing of pre-18S ribosomal RNA. Involved in ribosome biosynthesis (By similarity).By similarity

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

  • snoRNA binding Source: GO_Central

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionRibonucleoprotein
Biological processRibosome biogenesis, rRNA processing

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
U3 small nucleolar RNA-associated protein 10
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:UTP10By similarity
ORF Names:SNOG_02203
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiPhaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) (Glume blotch fungus) (Parastagonospora nodorum)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri321614 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaDothideomycetesPleosporomycetidaePleosporalesPleosporineaePhaeosphaeriaceaeParastagonospora
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000001055 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Unassembled WGS sequence

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00003085101 – 1712U3 small nucleolar RNA-associated protein 10Add BLAST1712

Proteomic databases

PRoteomics IDEntifications database

More...
PRIDEi
Q0V1B1

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction%5Fsection">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function%5Fsection">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Component of the ribosomal small subunit (SSU) processome.

By similarity

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
13684.SNOT_02203

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section indicates the positions and types of repeated sequence motifs or repeated domains within the protein.<p><a href='/help/repeat' target='_top'>More...</a></p>Repeati164 – 202HEAT 1Sequence analysisAdd BLAST39
Repeati490 – 528HEAT 2Sequence analysisAdd BLAST39
Repeati564 – 605HEAT 3Sequence analysisAdd BLAST42
Repeati987 – 1025HEAT 4Sequence analysisAdd BLAST39
Repeati1236 – 1275HEAT 5Sequence analysisAdd BLAST40
Repeati1605 – 1646HEAT 6Sequence analysisAdd BLAST42
Repeati1667 – 1705HEAT 7Sequence analysisAdd BLAST39

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the HEATR1/UTP10 family.Curated

Keywords - Domaini

Repeat

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG1837, Eukaryota

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_001128_3_1_1

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q0V1B1

KEGG Orthology (KO)

More...
KOi
K14550

Database of Orthologous Groups

More...
OrthoDBi
524830at2759

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
1.25.10.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR011989, ARM-like
IPR016024, ARM-type_fold
IPR012954, BP28_C_dom
IPR021133, HEAT_type_2
IPR022125, U3snoRNP10_N
IPR040191, UTP10

The PANTHER Classification System

More...
PANTHERi
PTHR13457, PTHR13457, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF08146, BP28CT, 1 hit
PF12397, U3snoRNP10, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF48371, SSF48371, 2 hits

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50077, HEAT_REPEAT, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

Q0V1B1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MATALQKQLA AIAASSTHQL DLKAQKSAHG KSLLFEPKIA ASQSFETVYL
60 70 80 90 100
ICYEGFRDLC ALDSRFLQFS KSLFSEQSKV EDRTQMTKEE NKKLNAVVEA
110 120 130 140 150
FITLVVNTPG FFNALQAHTV RVVKAGHQAP QMISFWSTIT LEAVFGILEN
160 170 180 190 200
TSSGRRDIQS QKTEELVLRI LPVLNSCMQA KYGAETVAAC YSIVTVLAGR
210 220 230 240 250
GELGEKVLDG LMEAVVLAHE ADSLNACLQC LAVLAEQRSP AQLPPRVIRR
260 270 280 290 300
LLKVPQLSQK LVQISKQCRV HRLTLGCALG ALASIDRLEE QRDVFQELMA
310 320 330 340 350
SGLLTEAYTR AALAALVTSI RDSAPGSTEH GQLLDLAAQL AETTYFLDGM
360 370 380 390 400
RAAAKSDNVD LESLGLTLAP ALETAQIDND EDEDMLDVDD VSSQAIAAPK
410 420 430 440 450
VEVPDFAVQS FLELDASQSF AEVANAFERA VSTHQSSPFL ASKSLGKENA
460 470 480 490 500
MHSNLYLSLL ARIWCSSQLP AARIAALRAA AATLKSAEDT CDFQNLIPYL
510 520 530 540 550
LHALADPSAP VRRAAAACTV ALSEASGSQA NTSTWGSSKL YGSSGKAQKH
560 570 580 590 600
VSQVVQLKSE DVSTLLSSIL IPMLEESVMD PTFAIPAIRE VLEGSKGSKS
610 620 630 640 650
QPKHGMNAQT RTYYRLSFFA SHLSLSPLVR IRIILFPIFN FSGKVSDTVR
660 670 680 690 700
SNTILPLIQG WCTLPLAEAS KVCDVEKVTL EDAYRGHLNA LVAREAKSVQ
710 720 730 740 750
LLNELMIESL DSSKRLLAEA VFDKVAAVWP ATKSEQRVTL ARTLLDMSFK
760 770 780 790 800
EGKDDGEKQC RERAIEILRN VKHDSATLLT FLESVPAAVQ MPEGPPTKKR
810 820 830 840 850
RRTSRNEMAR VELASQDDVQ RFVAKADFGF FELIEGSNPG QPSQPFSRVY
860 870 880 890 900
SLSSTTWQPL KQQSGSELVY VQSMILGSLT PIVDTLKVSD LVVHGFMHAN
910 920 930 940 950
TVQQQKDTAD YQSSVRADLL IDCIRHSTSP QVQNSALLLI ANLASWVPEL
960 970 980 990 1000
ILHNLMPIFT FIGSTLLRQQ DDYSAQVVDK VWCYHFTQTI SRVVPQLAAS
1010 1020 1030 1040 1050
LRAKHKNFLT GVSDLLLSFT AAFEHIPLHR RLKLFSELAR TLGPQDSLSA
1060 1070 1080 1090 1100
IISLLADRYH NGKTQRRFST ELLLVFDPIH TLDAIKGYLD LVVDAAGPKR
1110 1120 1130 1140 1150
KVSDSLFGLN DKTAAQVETA IKNLLVSLAD LATDDRLRAH VTRAFRRKDD
1160 1170 1180 1190 1200
PARPREVFAN IVETTIQLSK KVASSPKLYE ACSRVLANCL DLLPTTDLVK
1210 1220 1230 1240 1250
SAELLLVNTD HQVQIAAIKA VELRAGNAVQ NDKKSVISLI SFLPSVEKVL
1260 1270 1280 1290 1300
QQSQHTDAKI ISVGCIDRIV ERFGKKDMTA VASIAQTIAG SQALSSGNDT
1310 1320 1330 1340 1350
IRVLSLLCLT SIVDVLEDEA IALLPTVLPT AFDYLSQAIE GEKNGLHNAV
1360 1370 1380 1390 1400
YSLLSNIVER LGYMFSRDYL ETALRLSHRS AVGGLEDTCD ESRRTFYQNV
1410 1420 1430 1440 1450
SEHLGAQETF AAIKTTWPHA LSQGFEASSE HLELLRSTVD LQSKSKLIKA
1460 1470 1480 1490 1500
SSTLSEQAID SQEEQEYDDE EMNQLDNTLM SRTCHGSEAQ RCPPSGPFFV
1510 1520 1530 1540 1550
QLVDQEGPMS AKPEYAVTFY KFLAAFFDKF KSDCSRATQA TSSTTQPKML
1560 1570 1580 1590 1600
EHVAQEDADS ELRSAVLGAL QKSFQHDQDA FWQAPSHFGT ILKPLVNLLT
1610 1620 1630 1640 1650
ISATEEVTEV VIPTITDLAA SSSSSIDNHR ELNTILLRYM RSDSAATRLA
1660 1670 1680 1690 1700
TVKCEQSLTT RLGEEWLGLL PEMLPFISEL REDDDEMVER ETQRWISQVE
1710
GVLGESLEGM LQ
Length:1,712
Mass (Da):188,247
Last modified:April 8, 2008 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i8D2968BFF9A2D54B
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
CH445327 Genomic DNA Translation: EAT90415.2

NCBI Reference Sequences

More...
RefSeqi
XP_001792819.1, XM_001792767.1

Genome annotation databases

Ensembl fungal genome annotation project

More...
EnsemblFungii
SNOT_02203; SNOT_02203; SNOG_02203

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
5969669

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
pno:SNOG_02203

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH445327 Genomic DNA Translation: EAT90415.2
RefSeqiXP_001792819.1, XM_001792767.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

STRINGi13684.SNOT_02203

Proteomic databases

PRIDEiQ0V1B1

Genome annotation databases

EnsemblFungiiSNOT_02203; SNOT_02203; SNOG_02203
GeneIDi5969669
KEGGipno:SNOG_02203

Phylogenomic databases

eggNOGiKOG1837, Eukaryota
HOGENOMiCLU_001128_3_1_1
InParanoidiQ0V1B1
KOiK14550
OrthoDBi524830at2759

Family and domain databases

Gene3Di1.25.10.10, 1 hit
InterProiView protein in InterPro
IPR011989, ARM-like
IPR016024, ARM-type_fold
IPR012954, BP28_C_dom
IPR021133, HEAT_type_2
IPR022125, U3snoRNP10_N
IPR040191, UTP10
PANTHERiPTHR13457, PTHR13457, 1 hit
PfamiView protein in Pfam
PF08146, BP28CT, 1 hit
PF12397, U3snoRNP10, 1 hit
SUPFAMiSSF48371, SSF48371, 2 hits
PROSITEiView protein in PROSITE
PS50077, HEAT_REPEAT, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiUTP10_PHANO
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q0V1B1
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 23, 2007
Last sequence update: April 8, 2008
Last modified: August 12, 2020
This is version 69 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
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