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Protein
Submitted name:

Possible transcriptional regulator, TetR family protein

Gene

RHA1_ro03468

Organism
Rhodococcus jostii (strain RHA1)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi39 – 58H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationSAAS annotation

Enzyme and pathway databases

BioCyciRJOS101510:G1G71-3458-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
Possible transcriptional regulator, TetR family proteinImported
Gene namesi
Ordered Locus Names:RHA1_ro03468Imported
OrganismiRhodococcus jostii (strain RHA1)Imported
Taxonomic identifieri101510 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesNocardiaceaeRhodococcus
Proteomesi
  • UP000008710 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi101510.RHA1_ro03468

Structurei

3D structure databases

ProteinModelPortaliQ0SB15
SMRiQ0SB15
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ0SB15

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini17 – 76HTH tetR-typeInterPro annotationAdd BLAST60

Phylogenomic databases

eggNOGiENOG4105X64 Bacteria
ENOG41124EX LUCA
HOGENOMiHOG000097544
OMAiVTYYFGS
OrthoDBiPOG091H0WRW

Family and domain databases

InterProiView protein in InterPro
IPR009057 Homeobox-like_sf
IPR001647 HTH_TetR
IPR011075 Tet_transcr_reg_TetR-rel_C
IPR036271 Tet_transcr_reg_TetR-rel_C_sf
PfamiView protein in Pfam
PF16914 TetR_C_12, 1 hit
PF00440 TetR_N, 1 hit
SUPFAMiSSF46689 SSF46689, 1 hit
SSF48498 SSF48498, 1 hit
PROSITEiView protein in PROSITE
PS50977 HTH_TETR_2, 1 hit

Sequencei

Sequence statusi: Complete.

Q0SB15-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MVPQTGRAAR ATRESGRQTR DALFTAATEL FLEHGEGVPI TQICAAAGAH
60 70 80 90 100
PNQVTYYYGS KERLFVEVAC AAVLRAGKRA EDDAATAETV GDYTEKLVGS
110 120 130 140 150
LLGPGAPSVE LFTSAMLMTG RRSELRDLIT DTLRTLHSSG EVALIRTLMR
160 170 180 190 200
TGWQLRAGID VESKAFWSAI FGLVIQKTAT GESFGYSLEE AVAVIFANLQ
210
IPETVRNTSI D
Length:211
Mass (Da):22,758
Last modified:September 5, 2006 - v1
Checksum:i21210C6447CF07AB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000431 Genomic DNA Translation: ABG95271.1
RefSeqiWP_011596096.1, NC_008268.1

Genome annotation databases

EnsemblBacteriaiABG95271; ABG95271; RHA1_ro03468
GeneIDi4221019
KEGGirha:RHA1_ro03468
PATRICifig|101510.16.peg.3499

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000431 Genomic DNA Translation: ABG95271.1
RefSeqiWP_011596096.1, NC_008268.1

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2HKUX-ray2.00A/B1-211[»]
ProteinModelPortaliQ0SB15
SMRiQ0SB15
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi101510.RHA1_ro03468

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABG95271; ABG95271; RHA1_ro03468
GeneIDi4221019
KEGGirha:RHA1_ro03468
PATRICifig|101510.16.peg.3499

Phylogenomic databases

eggNOGiENOG4105X64 Bacteria
ENOG41124EX LUCA
HOGENOMiHOG000097544
OMAiVTYYFGS
OrthoDBiPOG091H0WRW

Enzyme and pathway databases

BioCyciRJOS101510:G1G71-3458-MONOMER

Miscellaneous databases

EvolutionaryTraceiQ0SB15

Family and domain databases

InterProiView protein in InterPro
IPR009057 Homeobox-like_sf
IPR001647 HTH_TetR
IPR011075 Tet_transcr_reg_TetR-rel_C
IPR036271 Tet_transcr_reg_TetR-rel_C_sf
PfamiView protein in Pfam
PF16914 TetR_C_12, 1 hit
PF00440 TetR_N, 1 hit
SUPFAMiSSF46689 SSF46689, 1 hit
SSF48498 SSF48498, 1 hit
PROSITEiView protein in PROSITE
PS50977 HTH_TETR_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiQ0SB15_RHOJR
AccessioniPrimary (citable) accession number: Q0SB15
Entry historyiIntegrated into UniProtKB/TrEMBL: September 5, 2006
Last sequence update: September 5, 2006
Last modified: October 10, 2018
This is version 92 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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