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Protein
Submitted name:

Transcriptional regulator

Gene

RHA1_ro04179

Organism
Rhodococcus jostii (strain RHA1)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi31 – 50H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationSAAS annotation

Enzyme and pathway databases

BioCyciRJOS101510:G1G71-4163-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
Transcriptional regulatorImported
Gene namesi
Ordered Locus Names:RHA1_ro04179Imported
OrganismiRhodococcus jostii (strain RHA1)Imported
Taxonomic identifieri101510 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesNocardiaceaeRhodococcus
Proteomesi
  • UP000008710 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi101510.RHA1_ro04179

Structurei

3D structure databases

ProteinModelPortaliQ0S914
SMRiQ0S914
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ0S914

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini8 – 68HTH tetR-typeInterPro annotationAdd BLAST61

Phylogenomic databases

eggNOGiENOG4105W1N Bacteria
COG1309 LUCA
HOGENOMiHOG000248228
OMAiEMFAFAL
OrthoDBiPOG091H02BD

Family and domain databases

InterProiView protein in InterPro
IPR039538 BetI_C
IPR009057 Homeobox-like_sf
IPR001647 HTH_TetR
IPR036271 Tet_transcr_reg_TetR-rel_C_sf
PfamiView protein in Pfam
PF13977 TetR_C_6, 1 hit
PF00440 TetR_N, 1 hit
PRINTSiPR00455 HTHTETR
SUPFAMiSSF46689 SSF46689, 1 hit
SSF48498 SSF48498, 1 hit
PROSITEiView protein in PROSITE
PS50977 HTH_TETR_2, 1 hit

Sequencei

Sequence statusi: Complete.

Q0S914-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MRERRYSSTS PERLAAALFD VAAESGLEGA SVREVAKRAG VSIGAVQHHF
60 70 80 90 100
STKDEMFAFA LRTLVDKLLA RLSEVERGGD PARALFAAMS QLLPLDEARS
110 120 130 140 150
REAHVMAAFA VRAATSPSLA EIRRKTLFTI RTGLSAVLIG IGTPEAETRA
160 170 180 190 200
ALLLATVDGL ALDAIGSPAL YPPEYLEHAL DIQIGMILQG ADVVPSSSIE

LAS
Length:203
Mass (Da):21,569
Last modified:September 5, 2006 - v1
Checksum:i61414853A1B62099
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000431 Genomic DNA Translation: ABG95972.1
RefSeqiWP_011596657.1, NC_008268.1

Genome annotation databases

EnsemblBacteriaiABG95972; ABG95972; RHA1_ro04179
GeneIDi4221730
KEGGirha:RHA1_ro04179
PATRICifig|101510.16.peg.4205

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000431 Genomic DNA Translation: ABG95972.1
RefSeqiWP_011596657.1, NC_008268.1

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2NP5X-ray1.80A/B/C/D1-203[»]
ProteinModelPortaliQ0S914
SMRiQ0S914
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi101510.RHA1_ro04179

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABG95972; ABG95972; RHA1_ro04179
GeneIDi4221730
KEGGirha:RHA1_ro04179
PATRICifig|101510.16.peg.4205

Phylogenomic databases

eggNOGiENOG4105W1N Bacteria
COG1309 LUCA
HOGENOMiHOG000248228
OMAiEMFAFAL
OrthoDBiPOG091H02BD

Enzyme and pathway databases

BioCyciRJOS101510:G1G71-4163-MONOMER

Miscellaneous databases

EvolutionaryTraceiQ0S914

Family and domain databases

InterProiView protein in InterPro
IPR039538 BetI_C
IPR009057 Homeobox-like_sf
IPR001647 HTH_TetR
IPR036271 Tet_transcr_reg_TetR-rel_C_sf
PfamiView protein in Pfam
PF13977 TetR_C_6, 1 hit
PF00440 TetR_N, 1 hit
PRINTSiPR00455 HTHTETR
SUPFAMiSSF46689 SSF46689, 1 hit
SSF48498 SSF48498, 1 hit
PROSITEiView protein in PROSITE
PS50977 HTH_TETR_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiQ0S914_RHOJR
AccessioniPrimary (citable) accession number: Q0S914
Entry historyiIntegrated into UniProtKB/TrEMBL: September 5, 2006
Last sequence update: September 5, 2006
Last modified: October 10, 2018
This is version 89 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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