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Protein

Bowman-Birk type bran trypsin inhibitor

Gene

RBBI3.3

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sitei135 – 136Reactive bond for trypsinBy similarity2
Sitei201 – 202Reactive bond for trypsinBy similarity2

GO - Molecular functioni

Keywordsi

Molecular functionProtease inhibitor, Serine protease inhibitor

Protein family/group databases

MEROPSiI12.007

Names & Taxonomyi

Protein namesi
Recommended name:
Bowman-Birk type bran trypsin inhibitor
Alternative name(s):
OSE727A
Protein RBBI3-3
RBTI
Gene namesi
Name:RBBI3.3
Ordered Locus Names:Os01g0124401, Os01g0124400, LOC_Os01g03360
ORF Names:P0037C04.19, P0044F08.1
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryzaOryza sativa
Proteomesi
  • UP000059680 Componenti: Chromosome 1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 22Sequence analysisAdd BLAST22
PropeptideiPRO_000000328623 – 1181 PublicationAdd BLAST96
ChainiPRO_0000003287119 – 251Bowman-Birk type bran trypsin inhibitorAdd BLAST133
PropeptideiPRO_0000003288252 – 2543

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi125 ↔ 1851 Publication
Disulfide bondi126 ↔ 1431 Publication
Disulfide bondi152 ↔ 1591 Publication
Disulfide bondi156 ↔ 1721 Publication
Disulfide bondi193 ↔ 2481 Publication
Disulfide bondi194 ↔ 2091 Publication
Disulfide bondi199 ↔ 2071 Publication
Disulfide bondi216 ↔ 2231 Publication
Disulfide bondi220 ↔ 2361 Publication

Keywords - PTMi

Disulfide bond

Proteomic databases

PaxDbiQ0JR25
PRIDEiQ0JR25

Expressioni

Gene expression databases

GenevisibleiQ0JR25 OS

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os01g03360.1

Structurei

Secondary structure

1254
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi127 – 131Combined sources5
Beta strandi140 – 143Combined sources4
Beta strandi172 – 179Combined sources8
Turni203 – 205Combined sources3

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2QN5X-ray3.00B119-251[»]
ProteinModelPortaliQ0JR25
SMRiQ0JR25
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ0JR25

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati46 – 120Add BLAST75
Repeati121 – 187Add BLAST67
Repeati188 – 251Add BLAST64

Sequence similaritiesi

Keywords - Domaini

Repeat, Signal

Phylogenomic databases

InParanoidiQ0JR25
OMAiGPVCKPR
OrthoDBiEOG09360N83

Family and domain databases

CDDicd00023 BBI, 3 hits
InterProiView protein in InterPro
IPR035995 Bowman-Birk_prot_inh
IPR000877 Prot_inh_BBI
PfamiView protein in Pfam
PF00228 Bowman-Birk_leg, 4 hits
SMARTiView protein in SMART
SM00269 BowB, 3 hits
SUPFAMiSSF57247 SSF57247, 3 hits
PROSITEiView protein in PROSITE
PS00281 BOWMAN_BIRK, 2 hits

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q0JR25-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSNTTMATST ILLFLLAGLA AAHGDGDTTI RLPSDGAKAS RPRAAKPWDC
60 70 80 90 100
CDNIEISRLM IYPPLYRCND EVKQCAAACK ECVEAPGGDF NGGAFVCSDW
110 120 130 140 150
FSTVDPGPKC TAALDGLSME RPWKCCDNIK RLPTKPDPPQ WRCNDELEPS
160 170 180 190 200
QCTAACKSCR EAPGPFPGKL ICEDIYWGAD PGPFCTPRPW GDCCDKAFCN
210 220 230 240 250
KMNPPTCRCM DEVKECADAC KDCQRVESSE PPRYVCKDRF TGHPGPVCKP

RAEN
Length:254
Mass (Da):27,790
Last modified:July 10, 2007 - v2
Checksum:i32630D7DE579C1E8
GO

Sequence cautioni

The sequence AAB68026 differs from that shown. Reason: Erroneous initiation.Curated
The sequence AAD10378 differs from that shown. Chimeric cDNA. Its N-terminal part is derived from the gene LOC_Os01g03390, which coded for an RBBI2.3 protein.Curated
The sequence BAD52869 differs from that shown. Reason: Erroneous gene model prediction.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti121R → K in AAB68026 (Ref. 6) Curated1
Sequence conflicti121R → K in AAD10378 (Ref. 6) Curated1
Sequence conflicti130K → E in AAB68026 (Ref. 6) Curated1
Sequence conflicti130K → E in AAD10378 (Ref. 6) Curated1
Sequence conflicti136 – 137PD → TN in AAB68026 (Ref. 6) Curated2
Sequence conflicti136 – 137PD → TN in AAD10378 (Ref. 6) Curated2
Sequence conflicti189P → T in AAB68026 (Ref. 6) Curated1
Sequence conflicti189P → T in AAD10378 (Ref. 6) Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB098712 mRNA Translation: BAC78439.1
AP002909 Genomic DNA Translation: BAB21173.1
AP003233 Genomic DNA Translation: BAD52869.1 Sequence problems.
AP008207 Genomic DNA Translation: BAH90883.1
AP014957 Genomic DNA Translation: BAS70158.1
U57640 mRNA Translation: AAD10378.1 Sequence problems.
U76004 mRNA Translation: AAB68026.1 Different initiation.
PIRiA27193 TIRZBR
T04161
RefSeqiXP_015622026.1, XM_015766540.1
UniGeneiOs.74608

Genome annotation databases

EnsemblPlantsiOs01t0124401-01; Os01t0124401-01; Os01g0124401
GeneIDi9271230
GrameneiOs01t0124401-01; Os01t0124401-01; Os01g0124401
KEGGiosa:9271230

Similar proteinsi

Entry informationi

Entry nameiIBBR_ORYSJ
AccessioniPrimary (citable) accession number: Q0JR25
Secondary accession number(s): A0A0P0UXL8
, C7IWR7, P07084, P93432, Q5ZCA7, Q7XZC9, Q9AWV9, Q9M3W2, Q9SAS2
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 10, 2007
Last sequence update: July 10, 2007
Last modified: May 23, 2018
This is version 75 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  3. SIMILARITY comments
    Index of protein domains and families

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