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Protein

Isochorismatase domain-containing protein 1

Gene

isoc1

Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Recommended name:
Isochorismatase domain-containing protein 1
Gene namesi
Name:isoc1
OrganismiXenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Taxonomic identifieri8364 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusSilurana
Proteomesi
  • UP000008143 Componenti: Unassembled WGS sequence

Organism-specific databases

XenbaseiXB-GENE-491284 isoc1

Subcellular locationi

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002686691 – 308Isochorismatase domain-containing protein 1Add BLAST308

Proteomic databases

PaxDbiQ0IHU5
PRIDEiQ0IHU5

Expressioni

Gene expression databases

BgeeiENSXETG00000008281

Interactioni

Protein-protein interaction databases

STRINGi8364.ENSXETP00000018162

Structurei

3D structure databases

ProteinModelPortaliQ0IHU5
SMRiQ0IHU5
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the isochorismatase family.Curated

Phylogenomic databases

eggNOGiKOG4044 Eukaryota
ENOG4111I3F LUCA
GeneTreeiENSGT00390000006753
HOGENOMiHOG000231573
HOVERGENiHBG056777
InParanoidiQ0IHU5
OMAiFIISERC
OrthoDBiEOG091G0LXB
TreeFamiTF313459

Family and domain databases

Gene3Di3.40.50.850, 1 hit
InterProiView protein in InterPro
IPR000868 Isochorismatase-like
IPR036380 Isochorismatase-like_sf
PfamiView protein in Pfam
PF00857 Isochorismatase, 1 hit
SUPFAMiSSF52499 SSF52499, 1 hit

Sequencei

Sequence statusi: Complete.

Q0IHU5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAENPVCTAQ VNIGSGSQSN SCISILGSNS INSNSVPVLF CFSVFARPSS
60 70 80 90 100
VPHGSGYELL IQKFLSLYGD QIDMHRKFVV QLFAEEWGQY IDLPKGFIIS
110 120 130 140 150
ERCKIRLVPL QIQLTTLGNL TPASTVFFCC DMQERFRPAI KYFGDIISVG
160 170 180 190 200
QRLLQGARIL GIPVIATEQY PKGLGSTVQE LDLTGVKLVL PKTKFSMVLP
210 220 230 240 250
EVEAALAETP GVRSVVLFGV ETHVCIQQTA LDLIGRGVEV HIVADATSSR
260 270 280 290 300
SMMDRMFALE RLARNGIIIT TSEAILLQLV ADKDHPKFKE IQNLIKASAP

ESGLLSKV
Length:308
Mass (Da):33,668
Last modified:October 3, 2006 - v1
Checksum:i12C034128D4A648B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC122966 mRNA Translation: AAI22967.1
RefSeqiNP_001072597.1, NM_001079129.1
UniGeneiStr.53576

Genome annotation databases

EnsembliENSXETT00000018162; ENSXETP00000018162; ENSXETG00000008281
GeneIDi780052
KEGGixtr:780052

Similar proteinsi

Entry informationi

Entry nameiISOC1_XENTR
AccessioniPrimary (citable) accession number: Q0IHU5
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 12, 2006
Last sequence update: October 3, 2006
Last modified: May 23, 2018
This is version 57 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

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