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Protein
Submitted name:

MGC154878 protein

Gene

map1lc3c

Organism
Xenopus laevis (African clawed frog)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Keywordsi

Biological processAutophagyUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
MGC154878 proteinImported
Gene namesi
Name:map1lc3cImported
Synonyms:MGC154878Imported
ORF Names:XELAEV_18026933mgImported
OrganismiXenopus laevis (African clawed frog)Imported
Taxonomic identifieri8355 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusXenopus
Proteomesi
  • UP000186698 Componenti: Chromosome 5l

Organism-specific databases

XenbaseiXB-GENE-6252465 map1lc3c

Subcellular locationi

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Lipidationi124Phosphatidylethanolamine amidated glycineUniRule annotation1

Keywords - PTMi

LipoproteinUniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the ATG8 family.UniRule annotationSAAS annotation

Phylogenomic databases

HOVERGENiHBG051706
KOiK10435

Family and domain databases

CDDicd01611 GABARAP, 1 hit
InterProiView protein in InterPro
IPR004241 Atg8-like
IPR027731 MAP1A/MAP1B_LC3C
IPR029071 Ubiquitin-like_domsf
PANTHERiPTHR10969 PTHR10969, 1 hit
PTHR10969:SF41 PTHR10969:SF41, 1 hit
PfamiView protein in Pfam
PF02991 Atg8, 1 hit
SUPFAMiSSF54236 SSF54236, 1 hit

Sequencei

Sequence statusi: Complete.

Q0IH19-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MQSNQKMSQP FKQRKSLASR KEEVIGIKAK FPTKIPVIVE RYRREKYLPL
60 70 80 90 100
LDKTKFLVPK DLSMMQFINI IRNRMNLSAT QAFYLLVNNK SLASMSLTMA
110 120
ELYKDHKDED GFLYMTYASQ EMFG
Length:124
Mass (Da):14,583
Last modified:October 3, 2006 - v1
Checksum:i33CF2CE3EFE07024
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC123362 mRNA Translation: AAI23363.1
CM004474 Genomic DNA Translation: OCT80124.1
RefSeqiNP_001090411.1, NM_001096942.1
UniGeneiXl.11686

Genome annotation databases

GeneIDi779323
KEGGixla:779323

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC123362 mRNA Translation: AAI23363.1
CM004474 Genomic DNA Translation: OCT80124.1
RefSeqiNP_001090411.1, NM_001096942.1
UniGeneiXl.11686

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi779323
KEGGixla:779323

Organism-specific databases

CTDi779323
XenbaseiXB-GENE-6252465 map1lc3c

Phylogenomic databases

HOVERGENiHBG051706
KOiK10435

Family and domain databases

CDDicd01611 GABARAP, 1 hit
InterProiView protein in InterPro
IPR004241 Atg8-like
IPR027731 MAP1A/MAP1B_LC3C
IPR029071 Ubiquitin-like_domsf
PANTHERiPTHR10969 PTHR10969, 1 hit
PTHR10969:SF41 PTHR10969:SF41, 1 hit
PfamiView protein in Pfam
PF02991 Atg8, 1 hit
SUPFAMiSSF54236 SSF54236, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiQ0IH19_XENLA
AccessioniPrimary (citable) accession number: Q0IH19
Entry historyiIntegrated into UniProtKB/TrEMBL: October 3, 2006
Last sequence update: October 3, 2006
Last modified: June 20, 2018
This is version 58 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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