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Protein

40S ribosomal protein S11

Gene

RpS11

Organism
Drosophila melanogaster (Fruit fly)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  • rRNA binding Source: UniProtKB-KW
  • structural constituent of ribosome Source: FlyBase

GO - Biological processi

  • cytoplasmic translation Source: FlyBase

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Enzyme and pathway databases

ReactomeiR-DME-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-DME-1799339 SRP-dependent cotranslational protein targeting to membrane
R-DME-6791226 Major pathway of rRNA processing in the nucleolus and cytosol
R-DME-72649 Translation initiation complex formation
R-DME-72689 Formation of a pool of free 40S subunits
R-DME-72695 Formation of the ternary complex, and subsequently, the 43S complex
R-DME-72702 Ribosomal scanning and start codon recognition
R-DME-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-DME-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-DME-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S11
Gene namesi
Name:RpS11
ORF Names:CG8857
OrganismiDrosophila melanogaster (Fruit fly)
Taxonomic identifieri7227 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraHolometabolaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora
Proteomesi
  • UP000000803 Componenti: Chromosome 2R

Organism-specific databases

FlyBaseiFBgn0033699 RpS11

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemovedBy similarity
ChainiPRO_00002829442 – 15540S ribosomal protein S11By similarityAdd BLAST154

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei2N-acetylalanineBy similarity1

Keywords - PTMi

Acetylation

Proteomic databases

PaxDbiQ0E9B6
PRIDEiQ0E9B6

Expressioni

Gene expression databases

BgeeiFBgn0033699
ExpressionAtlasiQ0E9B6 baseline and differential
GenevisibleiQ0E9B6 DM

Interactioni

Protein-protein interaction databases

BioGridi62099, 24 interactors
IntActiQ0E9B6, 3 interactors
MINTiQ0E9B6
STRINGi7227.FBpp0087115

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4V6Welectron microscopy6.00AL1-155[»]
ProteinModelPortaliQ0E9B6
SMRiQ0E9B6
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uS17 family.Sequence analysis

Phylogenomic databases

eggNOGiKOG1728 Eukaryota
COG0186 LUCA
GeneTreeiENSGT00390000002732
InParanoidiQ0E9B6
KOiK02949
OMAiKKYERYE
OrthoDBiEOG091G0QVV
PhylomeDBiQ0E9B6

Family and domain databases

InterProiView protein in InterPro
IPR012340 NA-bd_OB-fold
IPR032440 Ribosomal_S11_N
IPR000266 Ribosomal_S17/S11
IPR028333 Ribosomal_S17_arc-typ
IPR019979 Ribosomal_S17_CS
PANTHERiPTHR10744 PTHR10744, 1 hit
PfamiView protein in Pfam
PF00366 Ribosomal_S17, 1 hit
PF16205 Ribosomal_S17_N, 1 hit
PRINTSiPR00973 RIBOSOMALS17
ProDomiView protein in ProDom or Entries sharing at least one domain
PD001295 Ribosomal_S17, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR03630 uS17_arch, 1 hit
PROSITEiView protein in PROSITE
PS00056 RIBOSOMAL_S17, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q0E9B6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MADQNERAFQ KQFGVNLNRK VKPGITKKKL LRRSRDVGLG FKTPREAIDG
60 70 80 90 100
TYIDKKCPWT GDVRIRGRIL TGVVRKAKMQ RTIVIRRDYL HFVRKYSRFE
110 120 130 140 150
KRHRNMSVHC SPVFRDVEHG DIVTIGECRP LSKTVRFNVL KVSKGQGAKK

SFKKY
Length:155
Mass (Da):18,105
Last modified:October 17, 2006 - v1
Checksum:iC766CB496B78C2D2
GO

Sequence cautioni

The sequence ACR53996 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.Curated
The sequence ACR53998 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE013599 Genomic DNA Translation: AAM71028.1
BT088759 mRNA Translation: ACR53996.1 Different initiation.
BT088761 mRNA Translation: ACR53998.1 Different initiation.
RefSeqiNP_725114.1, NM_165868.2

Genome annotation databases

EnsemblMetazoaiFBtr0088007; FBpp0087115; FBgn0033699
GeneIDi36321
KEGGidme:Dmel_CG8857

Similar proteinsi

Entry informationi

Entry nameiRS11_DROME
AccessioniPrimary (citable) accession number: Q0E9B6
Secondary accession number(s): C4JD62, E2QC50
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 3, 2007
Last sequence update: October 17, 2006
Last modified: May 23, 2018
This is version 90 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programDrosophila annotation project

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Drosophila
    Drosophila: entries, gene names and cross-references to FlyBase
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. Ribosomal proteins
    Ribosomal proteins families and list of entries
  4. SIMILARITY comments
    Index of protein domains and families

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