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Entry version 102 (23 Feb 2022)
Sequence version 3 (08 May 2019)
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Protein

Cytosolic carboxypeptidase 4

Gene

Agbl1

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Metallocarboxypeptidase that mediates deglutamylation of tubulin and non-tubulin target proteins (PubMed:21074048).

Catalyzes the removal of polyglutamate side chains present on the gamma-carboxyl group of glutamate residues within the C-terminal tail of tubulin protein (PubMed:21074048).

Specifically cleaves tubulin long-side-chains, while it is not able to remove the branching point glutamate (PubMed:21074048).

Also catalyzes the removal of polyglutamate residues from the carboxy-terminus of non-tubulin proteins such as MYLK (PubMed:21074048).

1 Publication

<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section describes the catalytic activity of an enzyme, i.e. a chemical reaction that the enzyme catalyzes.<p><a href='/help/catalytic_activity' target='_top'>More...</a></p>Catalytic activityi

<p>This subsection of the 'Function' section provides information relevant to cofactors. A cofactor is any non-protein substance required for a protein to be catalytically active. Some cofactors are inorganic, such as the metal atoms zinc, iron, and copper in various oxidation states. Others, such as most vitamins, are organic.<p><a href='/help/cofactor' target='_top'>More...</a></p>Cofactori

Zn2+By similarityNote: Binds 1 zinc ion per subunit.By similarity

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section indicates at which position the protein binds a given metal ion. The nature of the metal is indicated in the 'Description' field.<p><a href='/help/metal' target='_top'>More...</a></p>Metal bindingi803ZincCurated1
Metal bindingi806ZincCurated1
<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section is used for enzymes and indicates the residues directly involved in catalysis.<p><a href='/help/act_site' target='_top'>More...</a></p>Active sitei853NucleophileBy similarity1
Metal bindingi900ZincBy similarity1

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionCarboxypeptidase, Hydrolase, Metalloprotease, Protease
LigandMetal-binding, Zinc

Protein family/group databases

MEROPS protease database

More...
MEROPSi
M14.030

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Cytosolic carboxypeptidase 41 Publication (EC:3.4.17.-1 Publication, EC:3.4.17.241 Publication)
Alternative name(s):
ATP/GTP-binding protein-like 1
Protein deglutamylase CCP4Curated
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Agbl1Imported
Synonyms:Ccp41 Publication
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMus musculus (Mouse)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10090 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000589 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 7

Organism-specific databases

Mouse genome database (MGD) from Mouse Genome Informatics (MGI)

More...
MGIi
MGI:3646469, Agbl1

Eukaryotic Pathogen, Vector and Host Database Resources

More...
VEuPathDBi
HostDB:ENSMUSG00000025754

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Keywords - Cellular componenti

Cytoplasm

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

Mutagenesis

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/manual/pathology%5Fand%5Fbiotech%5Fsection">'Pathology and Biotech'</a> section describes the effect of the experimental mutation of one or more amino acid(s) on the biological properties of the protein.<p><a href='/help/mutagen' target='_top'>More...</a></p>Mutagenesisi803H → S: Abolishes deglutamylase activity; when associated with Q-806. 1 Publication1
Mutagenesisi806E → Q: Abolishes deglutamylase activity; when associated with S-803. 1 Publication1

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00003050001 – 1122Cytosolic carboxypeptidase 4Add BLAST1122

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q09M05

PRoteomics IDEntifications database

More...
PRIDEi
Q09M05

ProteomicsDB: a multi-organism proteome resource

More...
ProteomicsDBi
265562 [Q09M05-4]
265563 [Q09M05-2]
265564 [Q09M05-3]
265565 [Q09M05-4]

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q09M05

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...
PhosphoSitePlusi
Q09M05

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

<p>This subsection of the 'Expression' section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms. By default, the information is derived from experiments at the mRNA level, unless specified 'at protein level'.<br></br>Examples: <a href="http://www.uniprot.org/uniprot/P92958#expression">P92958</a>, <a href="http://www.uniprot.org/uniprot/Q8TDN4#expression">Q8TDN4</a>, <a href="http://www.uniprot.org/uniprot/O14734#expression">O14734</a><p><a href='/help/tissue_specificity' target='_top'>More...</a></p>Tissue specificityi

Widely expressed at low level. Expressed in eye, muscle, pituitary, testis and to a lower extent in brain.3 Publications

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSMUSG00000025754, Expressed in spinal cord and 47 other tissues

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction%5Fsection">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function%5Fsection">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Interacts with MYLK (PubMed:21074048).

Interacts with TCF4 (By similarity).

By similarity1 Publication

GO - Molecular functioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
10090.ENSMUSP00000103066

Miscellaneous databases

RNAct, Protein-RNA interaction predictions for model organisms.

More...
RNActi
Q09M05, protein

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q09M05

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni287 – 338DisorderedSequence analysisAdd BLAST52
Regioni1099 – 1122DisorderedSequence analysisAdd BLAST24

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular type of amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi298 – 324Acidic residuesSequence analysisAdd BLAST27

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the peptidase M14 family.Curated

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG3641, Eukaryota

Ensembl GeneTree

More...
GeneTreei
ENSGT00940000160936

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_007391_1_0_1

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q09M05

Database of Orthologous Groups

More...
OrthoDBi
481670at2759

TreeFam database of animal gene trees

More...
TreeFami
TF333192

Family and domain databases

Conserved Domains Database

More...
CDDi
cd06906, M14_Nna1, 1 hit

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
1.25.10.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR011989, ARM-like
IPR016024, ARM-type_fold
IPR033852, CBPC1/4
IPR040626, Pepdidase_M14_N
IPR000834, Peptidase_M14

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF18027, Pepdidase_M14_N, 1 hit
PF00246, Peptidase_M14, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF48371, SSF48371, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (3+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 3 <p>This subsection of the 'Sequence' section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket

This entry has 3 described isoforms and 1 potential isoform that is computationally mapped.Show allAlign All

Isoform 1 (identifier: Q09M05-4) [UniParc]FASTAAdd to basket

This isoform has been chosen as the <p><strong>What is the canonical sequence?</strong><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MAEQEGSGLQ MLLHTLQNSS DKASTLSILQ VLGDLLSVGT DRRIYYMISK
60 70 80 90 100
GGSEALLQTL VDTARSSSPD WDILLPLFRL LAKVGLRDKK FGQKALELEA
110 120 130 140 150
LDVTLILARK NLSHSQNLLH CLWVLRVFAS SVTTGAMLGI NGAMELLFKV
160 170 180 190 200
LSPYTRKHTR TIRAATEVLA ALLKSSKHLR RAVNRGYVNS LLRLHQDWHS
210 220 230 240 250
RDVTNTYVTI RHGLLLCLRH IVALRSGREA FLAAQGMETL FSSAQTCLEN
260 270 280 290 300
KNMELVISAV IQILRQCYPA SRLPLVTASS AYTFPAPGST SSELPLNLTE
310 320 330 340 350
EDFDDDGDEE MDKDSDVEAV KEDDDLETDL SKLSSKPGLD LPEEELAQYD
360 370 380 390 400
AMCPELSCSF EELEPKCGDD LNNKDTLHAN HHHIPSVASL RQHCFNREHS
410 420 430 440 450
SWRQEREDTV HSSILHMVKT GKSGVPSSSK QRSATNVNQS LQQNGLEIDS
460 470 480 490 500
SGHDTSDIQA PLEQAAWDME AISCPRITAS FPNSTKPEES IGAAEKLLHT
510 520 530 540 550
HAKHIPFHDP HLYIANAMRT RSAVGFKTMA FPDLWGHCPP PAAQPMLDRK
560 570 580 590 600
LGVQRIKILE DIRRLLHPSD VINKVVFSLD EPRPLQGSIS NCLMFHSKFE
610 620 630 640 650
SGNLRKAIQV REFEYDLLVN ADVNSSQHQQ WFYFKVSGMR AAVPYHFNII
660 670 680 690 700
NCEKPNSQFN YGMQPTLYSV KEALLGRPAW IRTGSDICYY KNHYRQNAAT
710 720 730 740 750
MDGALGKRYY TLTFAVTFPH NEDACYLAYH YPYTYSTLMT HLEILERSID
760 770 780 790 800
HREIYFRHDV LCQTLGGNPC PLVTITAFPE SNSTEHLEQF RCRPYQVITA
810 820 830 840 850
RVHPGESNAS WVMKGTLEFL VSSDPVAKLL RENFVFKIIP MLNPDGVING
860 870 880 890 900
NHRCSLRGED LNRQWLSPQA HLQPTIYHAK GLLHYLSSTG RGPVVFCDFH
910 920 930 940 950
GHSQKKNVFL YGCSMKETLW QAGCTVGESA LLEDVSYRTL PKILDKLAPA
960 970 980 990 1000
FTMNSCSFLV EKSRASTARV VVWREMGVSR SYTMESSYCG CNQGPYQGLQ
1010 1020 1030 1040 1050
FGTGELEEMG AMYCLGLLIL ELKSVNCSHK LLARASSLLN ADVLEHYLQR
1060 1070 1080 1090 1100
CSSSSSNSSN RTSEVDDEPY CMEEIDYSAD SSSDAEQNFT ELDRQIQECA
1110 1120
LNKDEEEEEK EEGTGWRRRS VT
Length:1,122
Mass (Da):126,149
Last modified:May 8, 2019 - v3
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iF9B818FB39F03B37
GO
Isoform 2 (identifier: Q09M05-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-252: Missing.
     896-903: FCDFHGHS → SHFLLFIL
     904-1122: Missing.

Show »
Length:651
Mass (Da):73,608
Checksum:iDC8FA5375A1C1E3E
GO
Isoform 3 (identifier: Q09M05-3) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-252: Missing.
     998-1018: GLQFGTGELEEMGAMYCLGLL → VCEVYTARSLCSAADHKNRGK
     1019-1122: Missing.

Show »
Length:766
Mass (Da):86,375
Checksum:iE8656F1875720724
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
D3Z1M2D3Z1M2_MOUSE
Tubulin-glutamate carboxypeptidase
Agbl1
1,122Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti176 – 179SKHL → KSNC in CAZ69802 (PubMed:21074048).Curated4
Sequence conflicti243S → I in CAZ69802 (PubMed:21074048).Curated1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_0601621 – 252Missing in isoform 3 and isoform 2. Add BLAST252
Alternative sequenceiVSP_060163896 – 903FCDFHGHS → SHFLLFIL in isoform 2. 8
Alternative sequenceiVSP_060164904 – 1122Missing in isoform 2. Add BLAST219
Alternative sequenceiVSP_060165998 – 1018GLQFG…CLGLL → VCEVYTARSLCSAADHKNRG K in isoform 3. Add BLAST21
Alternative sequenceiVSP_0601661019 – 1122Missing in isoform 3. Add BLAST104

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
DQ867033 mRNA Translation: ABI51952.1
FN429927 mRNA Translation: CAZ69802.1
AK052433 mRNA Translation: BAC34986.1
AC115830 Genomic DNA No translation available.
AC165265 Genomic DNA No translation available.
AC121812 Genomic DNA No translation available.
AC123792 Genomic DNA No translation available.
AC121971 Genomic DNA No translation available.

The Consensus CDS (CCDS) project

More...
CCDSi
CCDS85321.1 [Q09M05-4]

NCBI Reference Sequences

More...
RefSeqi
NP_001186153.1, NM_001199224.1

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSMUST00000026854; ENSMUSP00000026854; ENSMUSG00000025754 [Q09M05-2]
ENSMUST00000107442; ENSMUSP00000103066; ENSMUSG00000025754 [Q09M05-3]

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
244071

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
mmu:244071

UCSC genome browser

More...
UCSCi
uc009hxb.1, mouse [Q09M05-2]
uc009hxc.1, mouse [Q09M05-4]
uc012fnc.1, mouse [Q09M05-4]

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DQ867033 mRNA Translation: ABI51952.1
FN429927 mRNA Translation: CAZ69802.1
AK052433 mRNA Translation: BAC34986.1
AC115830 Genomic DNA No translation available.
AC165265 Genomic DNA No translation available.
AC121812 Genomic DNA No translation available.
AC123792 Genomic DNA No translation available.
AC121971 Genomic DNA No translation available.
CCDSiCCDS85321.1 [Q09M05-4]
RefSeqiNP_001186153.1, NM_001199224.1

3D structure databases

SMRiQ09M05
ModBaseiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000103066

Protein family/group databases

MEROPSiM14.030

PTM databases

iPTMnetiQ09M05
PhosphoSitePlusiQ09M05

Proteomic databases

PaxDbiQ09M05
PRIDEiQ09M05
ProteomicsDBi265562 [Q09M05-4]
265563 [Q09M05-2]
265564 [Q09M05-3]
265565 [Q09M05-4]

Protocols and materials databases

Antibodypedia a portal for validated antibodies

More...
Antibodypediai
78500, 41 antibodies from 16 providers

The DNASU plasmid repository

More...
DNASUi
244071

Genome annotation databases

EnsembliENSMUST00000026854; ENSMUSP00000026854; ENSMUSG00000025754 [Q09M05-2]
ENSMUST00000107442; ENSMUSP00000103066; ENSMUSG00000025754 [Q09M05-3]
GeneIDi244071
KEGGimmu:244071
UCSCiuc009hxb.1, mouse [Q09M05-2]
uc009hxc.1, mouse [Q09M05-4]
uc012fnc.1, mouse [Q09M05-4]

Organism-specific databases

Comparative Toxicogenomics Database

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CTDi
123624
MGIiMGI:3646469, Agbl1
VEuPathDBiHostDB:ENSMUSG00000025754

Phylogenomic databases

eggNOGiKOG3641, Eukaryota
GeneTreeiENSGT00940000160936
HOGENOMiCLU_007391_1_0_1
InParanoidiQ09M05
OrthoDBi481670at2759
TreeFamiTF333192

Miscellaneous databases

BioGRID ORCS database of CRISPR phenotype screens

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BioGRID-ORCSi
244071, 0 hits in 13 CRISPR screens

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

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ChiTaRSi
Agbl1, mouse

Protein Ontology

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PROi
PR:Q09M05
RNActiQ09M05, protein

The Stanford Online Universal Resource for Clones and ESTs

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SOURCEi
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Gene expression databases

BgeeiENSMUSG00000025754, Expressed in spinal cord and 47 other tissues

Family and domain databases

CDDicd06906, M14_Nna1, 1 hit
Gene3Di1.25.10.10, 1 hit
InterProiView protein in InterPro
IPR011989, ARM-like
IPR016024, ARM-type_fold
IPR033852, CBPC1/4
IPR040626, Pepdidase_M14_N
IPR000834, Peptidase_M14
PfamiView protein in Pfam
PF18027, Pepdidase_M14_N, 1 hit
PF00246, Peptidase_M14, 1 hit
SUPFAMiSSF48371, SSF48371, 1 hit

MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiCBPC4_MOUSE
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q09M05
Secondary accession number(s): Q8C768
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 2, 2007
Last sequence update: May 8, 2019
Last modified: February 23, 2022
This is version 102 of the entry and version 3 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. Peptidase families
    Classification of peptidase families and list of entries
  2. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  3. SIMILARITY comments
    Index of protein domains and families
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