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Protein
Submitted name:

Carbohydrate binding module (Family 6)

Gene

STIAU_8038

Organism
Stigmatella aurantiaca (strain DW4/3-1)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

GO - Molecular functioni

Protein family/group databases

CAZyiCBM35 Carbohydrate-Binding Module Family 35
CBM66 Carbohydrate-Binding Module Family 66

Names & Taxonomyi

Protein namesi
Submitted name:
Carbohydrate binding module (Family 6)Imported
Gene namesi
ORF Names:STIAU_8038Imported
OrganismiStigmatella aurantiaca (strain DW4/3-1)Imported
Taxonomic identifieri378806 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaMyxococcalesCystobacterineaeArchangiaceaeStigmatella
Proteomesi
  • UP000032702 Componenti: Unassembled WGS sequence

Structurei

3D structure databases

ProteinModelPortaliQ09C00
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini495 – 646F5/8 type CInterPro annotationAdd BLAST152
Domaini819 – 940CBM6InterPro annotationAdd BLAST122

Phylogenomic databases

eggNOGiENOG4105G5V Bacteria
ENOG410XSDI LUCA

Family and domain databases

Gene3Di1.50.10.10, 1 hit
2.60.120.260, 2 hits
InterProiView protein in InterPro
IPR008928 6-hairpin_glycosidase_sf
IPR012341 6hp_glycosidase-like_sf
IPR005084 CMB_fam6
IPR013320 ConA-like_dom_sf
IPR010496 DUF1080
IPR000421 FA58C
IPR008979 Galactose-bd-like_sf
PfamiView protein in Pfam
PF16990 CBM_35, 1 hit
PF06439 DUF1080, 1 hit
PF00754 F5_F8_type_C, 1 hit
SUPFAMiSSF48208 SSF48208, 1 hit
SSF49785 SSF49785, 2 hits
SSF49899 SSF49899, 1 hit
PROSITEiView protein in PROSITE
PS51175 CBM6, 1 hit
PS50022 FA58C_3, 1 hit

Sequencei

Sequence statusi: Complete.

Q09C00-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MTGTQFLNPD AFLGGYADPA WYRKNIPFFE APDREIQDVY YYRWYAFLQH
60 70 80 90 100
LRYATPGVGY IVNEFVNAVW YSQKFDTISA AAGHHIYEAR WLRDPRYLDD
110 120 130 140 150
YQTFWLRGGG SARQYSFWAA DAYYARYLVN GDAAFLKDLL PELTENFDAW
160 170 180 190 200
SDHYEPSVGL YWQVPVWDAS EFTIGSYQTN DPYHGGKGYR PSLNAYQYGD
210 220 230 240 250
ATAIARIARL TGNTALETQF LNRAAAIKAT TQQKLWDPSR KFFFHMMRDN
260 270 280 290 300
QAQAYPQPEG TLLDGREHFG FVPWYFNMPD ASYSEAWSAL IDPQGFAATY
310 320 330 340 350
GPTTAERRHR LFMKDALSGC CRWNGVSWPF ATSQVLTAFA NLLNNYSQSY
360 370 380 390 400
VTRDDYFRVL RGYALSQYKN GRPYVAEALH ADTGQWIYDG VGHSEHYNHS
410 420 430 440 450
TYNDLVISGL VGIRPRADNT FEVNPLVPSS WAYFLLENVP YHGHLMTVLY
460 470 480 490 500
DRDGTRYGQG RGLRVYQDGV LLGSAATLQR LTVPMAAPIA PERPARLENF
510 520 530 540 550
AANAYTRGYP VASASYTNSI DDAQRVLDGR IYYDDIPNSR WTNYQSPNAS
560 570 580 590 600
DWLAVDFGTV RSVSEVRLYL YHDGGGVKPP ASYDVQSWNG TAWASLAGQA
610 620 630 640 650
KSPATPAGDA LNQVSFPAVN TRKIRVVFQN PAGAKVGVTE LEAWGPAASS
660 670 680 690 700
FTETFDANAS RWTTYGGAWS VANGQYSVAT SGGKAVANST RFSDFTFSAR
710 720 730 740 750
VTITPPGDAG LLFHVTNPEP GNDAHNGYYV GLVPSSGEVV LGKMNGSWQQ
760 770 780 790 800
LKSAPASIRA NTAHLVKVVA QQGSLHVYVD DLLTPKLTFE DTTFTEGAIG
810 820 830 840 850
LRAYQAAARF DDLQVSSRLL AEAESGTVTH AVINSNASAS GGRYVGELDY
860 870 880 890 900
ADSAVELRGL AVAKAGRYTV RITYANGTSG NSSHLLSVNG GAPQSVVYTP
910 920 930 940
TGGWARFSTV TAGVTLRSGT NTLRFTKGEQ FAELDVIEII PRL
Length:943
Mass (Da):104,229
Last modified:October 31, 2006 - v1
Checksum:i91A6886F52BE71C7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAMD01000007 Genomic DNA Translation: EAU69263.1

Genome annotation databases

EnsemblBacteriaiEAU69263; EAU69263; STIAU_8038
PATRICifig|378806.16.peg.8709

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAMD01000007 Genomic DNA Translation: EAU69263.1

3D structure databases

ProteinModelPortaliQ09C00
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiCBM35 Carbohydrate-Binding Module Family 35
CBM66 Carbohydrate-Binding Module Family 66

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiEAU69263; EAU69263; STIAU_8038
PATRICifig|378806.16.peg.8709

Phylogenomic databases

eggNOGiENOG4105G5V Bacteria
ENOG410XSDI LUCA

Family and domain databases

Gene3Di1.50.10.10, 1 hit
2.60.120.260, 2 hits
InterProiView protein in InterPro
IPR008928 6-hairpin_glycosidase_sf
IPR012341 6hp_glycosidase-like_sf
IPR005084 CMB_fam6
IPR013320 ConA-like_dom_sf
IPR010496 DUF1080
IPR000421 FA58C
IPR008979 Galactose-bd-like_sf
PfamiView protein in Pfam
PF16990 CBM_35, 1 hit
PF06439 DUF1080, 1 hit
PF00754 F5_F8_type_C, 1 hit
SUPFAMiSSF48208 SSF48208, 1 hit
SSF49785 SSF49785, 2 hits
SSF49899 SSF49899, 1 hit
PROSITEiView protein in PROSITE
PS51175 CBM6, 1 hit
PS50022 FA58C_3, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiQ09C00_STIAD
AccessioniPrimary (citable) accession number: Q09C00
Entry historyiIntegrated into UniProtKB/TrEMBL: October 31, 2006
Last sequence update: October 31, 2006
Last modified: March 28, 2018
This is version 43 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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