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UniProtKB - Q09285 (AKAP1_CAEEL)
Protein
KH domain-containing protein akap-1
Gene
akap-1
Organism
Caenorhabditis elegans
Status
Functioni
GO - Molecular functioni
- protein kinase A regulatory subunit binding Source: GO_Central
- RNA binding Source: UniProtKB-KW
GO - Biological processi
- regulation of protein kinase A signaling Source: InterPro
Keywordsi
Molecular function | RNA-binding |
Enzyme and pathway databases
Reactomei | R-CEL-983231, Factors involved in megakaryocyte development and platelet production |
Names & Taxonomyi
Protein namesi | Recommended name: KH domain-containing protein akap-1Curated |
Gene namesi | Name:akap-1Imported ORF Names:C56G2.1Imported |
Organismi | Caenorhabditis elegans |
Taxonomic identifieri | 6239 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Ecdysozoa › Nematoda › Chromadorea › Rhabditida › Rhabditina › Rhabditomorpha › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis |
Proteomesi |
|
Organism-specific databases
WormBasei | C56G2.1a ; CE24866 ; WBGene00016977 ; akap-1 C56G2.1b ; CE30637 ; WBGene00016977 ; akap-1 |
Subcellular locationi
Other locations
- Membrane Sequence analysis; Single-pass membrane protein Sequence analysis
Mitochondrion
- mitochondrion Source: GO_Central
Other locations
- integral component of membrane Source: UniProtKB-KW
- membrane Source: GO_Central
Topology
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Transmembranei | 108 – 128 | HelicalSequence analysisAdd BLAST | 21 |
Keywords - Cellular componenti
MembranePTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000050163 | 1 – 867 | KH domain-containing protein akap-1CuratedAdd BLAST | 867 |
Proteomic databases
EPDi | Q09285 |
PaxDbi | Q09285 |
PeptideAtlasi | Q09285 |
PTM databases
iPTMneti | Q09285 |
Expressioni
Gene expression databases
Bgeei | WBGene00016977, Expressed in material anatomical entity and 6 other tissues |
ExpressionAtlasi | Q09285, baseline and differential |
Interactioni
GO - Molecular functioni
- protein kinase A regulatory subunit binding Source: GO_Central
Protein-protein interaction databases
STRINGi | 6239.C56G2.1a |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 528 – 595 | KHPROSITE-ProRule annotationAdd BLAST | 68 | |
Domaini | 689 – 747 | TudorPROSITE-ProRule annotationAdd BLAST | 59 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 145 – 458 | DisorderedSequence analysisAdd BLAST | 314 | |
Regioni | 481 – 523 | DisorderedSequence analysisAdd BLAST | 43 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 148 – 184 | Polar residuesSequence analysisAdd BLAST | 37 | |
Compositional biasi | 185 – 275 | Basic and acidic residuesSequence analysisAdd BLAST | 91 | |
Compositional biasi | 284 – 308 | Basic and acidic residuesSequence analysisAdd BLAST | 25 | |
Compositional biasi | 332 – 363 | Polar residuesSequence analysisAdd BLAST | 32 | |
Compositional biasi | 364 – 379 | Basic and acidic residuesSequence analysisAdd BLAST | 16 | |
Compositional biasi | 380 – 396 | Polar residuesSequence analysisAdd BLAST | 17 | |
Compositional biasi | 428 – 458 | Basic and acidic residuesSequence analysisAdd BLAST | 31 | |
Compositional biasi | 489 – 510 | Polar residuesSequence analysisAdd BLAST | 22 |
Keywords - Domaini
Transmembrane, Transmembrane helixPhylogenomic databases
eggNOGi | KOG2279, Eukaryota |
GeneTreei | ENSGT00390000001360 |
HOGENOMi | CLU_330699_0_0_1 |
InParanoidi | Q09285 |
OMAi | WIENEAV |
OrthoDBi | 378332at2759 |
Family and domain databases
CDDi | cd04508, TUDOR, 1 hit |
Gene3Di | 2.40.50.90, 1 hit 3.30.1370.10, 1 hit |
InterProi | View protein in InterPro IPR033104, Akap1 IPR004087, KH_dom IPR004088, KH_dom_type_1 IPR036612, KH_dom_type_1_sf IPR035437, SNase_OB-fold_sf IPR002999, Tudor |
PANTHERi | PTHR22948:SF48, PTHR22948:SF48, 1 hit |
Pfami | View protein in Pfam PF00013, KH_1, 1 hit PF00567, TUDOR, 1 hit |
SMARTi | View protein in SMART SM00322, KH, 1 hit SM00333, TUDOR, 1 hit |
SUPFAMi | SSF54791, SSF54791, 1 hit |
PROSITEi | View protein in PROSITE PS50084, KH_TYPE_1, 1 hit PS50304, TUDOR, 1 hit |
s (2+)i Sequence
Sequence statusi: Complete.
This entry describes 2 produced by isoformsialternative splicing. AlignAdd to basketThis entry has 2 described isoforms and 3 potential isoforms that are computationally mapped.Show allAlign All
Isoform a (identifier: Q09285-1) [UniParc]FASTAAdd to basket
This isoform has been chosen as the sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. canonicali
10 20 30 40 50
MVAAAAADAL AAGGDSSSPS DLYNKITGQQ SSTTTSLSYA ACDVITRHLI
60 70 80 90 100
SMLLEISNWT NDLAKYLAGS EQSSDDGHNE RCLLFSSIFF AIDPSLALAQ
110 120 130 140 150
MSSVASKHAL LIALGGFSIA ALFVWYINKK DKDGRKKKKV GDVISNGLPK
160 170 180 190 200
TATASDVQTE NGNVKKANGH VNGDVQSSIG VSQKQQQKDE DEKTQKKDAV
210 220 230 240 250
QNEKPSIDKK QPKSQAPTEK KEEKTVEIHT ETEETDHVAA GDSGVVSEHK
260 270 280 290 300
EHDKKTKQKN DEPVSIDKKS EEIEVPKQAG VVNEEPKKQS EETVVEEQFV
310 320 330 340 350
KKEEPKLKSA PTPLLTMPSK KKVLENEQIP EEPTPTKMND ATSPLSLDIA
360 370 380 390 400
AQMSPASFSW SEEMEKSFNE EEFRLNESSD IDRSPASPLR HLQQQHNKNR
410 420 430 440 450
SSQKRKGGRV NGRDGVHQPQ QQHQQQKKEE QGQIKKGQRR LTKEKSVEET
460 470 480 490 500
PEKSQKRVVL KHHENEAGDA AHAQIIESPH HENASYEKSD SPGLDSQNSE
510 520 530 540 550
ASSQDSGRAT GPLASPHEDG LTTEDDFLPM YEFEIPNSLV GLIIGVKGKT
560 570 580 590 600
IKELSVRTNV RMLIRQHHET DKVKTHQICQ VRGKRDEINH CLQMLRRRFP
610 620 630 640 650
PARFPELNLQ PVVPPVLPNS NFDMLSTQPT WLTLPEDIKC EVAVSSIISA
660 670 680 690 700
SHFFIQQPTH PSFASLRHLD MYMGSLYGEQ SNLPELPIPC QNGLLCAAPV
710 720 730 740 750
GNAWFRAVTV QYFDETDEVF VKFVDYGGYS KMARQDLRQI RTDLMSLPFQ
760 770 780 790 800
STEVMLAHVR PVDGTTNWSD AAMQKFRAMC IGKVINCKMV GQSHDTRIPM
810 820 830 840 850
VELYMMSKDG KDAQEVRFDQ VLMNCGLART ADPSKMSRIT VPAALDTESR
860
MKRPSFSSQT SQTAVVC
Computationally mapped potential isoform sequencesi
There are 3 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basketA0A2K5ATU1 | A0A2K5ATU1_CAEEL | Tudor domain-containing protein | akap-1 C56G2.1, CELE_C56G2.1 | 847 | Annotation score: | ||
A0A2K5ATU5 | A0A2K5ATU5_CAEEL | Tudor domain-containing protein | akap-1 C56G2.1, CELE_C56G2.1 | 767 | Annotation score: | ||
A0A2K5ATV3 | A0A2K5ATV3_CAEEL | Tudor domain-containing protein | akap-1 C56G2.1, CELE_C56G2.1 | 861 | Annotation score: |
Alternative sequence
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Alternative sequenceiVSP_002856 | 1 – 458 | Missing in isoform b. CuratedAdd BLAST | 458 | |
Alternative sequenceiVSP_002857 | 459 – 500 | VLKHH…SQNSE → MKVYAKVQEEVKTRRLRKNS TTSSGYGYSVPMTPNTEILF DT in isoform b. CuratedAdd BLAST | 42 |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | FO080744 Genomic DNA Translation: CCD66341.1 FO080744 Genomic DNA Translation: CCD66342.1 |
RefSeqi | NP_741190.1, NM_171163.5 NP_741191.1, NM_171164.4 [Q09285-2] |
Genome annotation databases
EnsemblMetazoai | C56G2.1a.1; C56G2.1a.1; WBGene00016977 [Q09285-1] C56G2.1b.1; C56G2.1b.1; WBGene00016977 [Q09285-2] C56G2.1b.2; C56G2.1b.2; WBGene00016977 [Q09285-2] |
GeneIDi | 175898 |
Keywords - Coding sequence diversityi
Alternative splicingSimilar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | FO080744 Genomic DNA Translation: CCD66341.1 FO080744 Genomic DNA Translation: CCD66342.1 |
RefSeqi | NP_741190.1, NM_171163.5 NP_741191.1, NM_171164.4 [Q09285-2] |
3D structure databases
SMRi | Q09285 |
ModBasei | Search... |
Protein-protein interaction databases
STRINGi | 6239.C56G2.1a |
PTM databases
iPTMneti | Q09285 |
Proteomic databases
EPDi | Q09285 |
PaxDbi | Q09285 |
PeptideAtlasi | Q09285 |
Genome annotation databases
EnsemblMetazoai | C56G2.1a.1; C56G2.1a.1; WBGene00016977 [Q09285-1] C56G2.1b.1; C56G2.1b.1; WBGene00016977 [Q09285-2] C56G2.1b.2; C56G2.1b.2; WBGene00016977 [Q09285-2] |
GeneIDi | 175898 |
Organism-specific databases
CTDi | 175898 |
WormBasei | C56G2.1a ; CE24866 ; WBGene00016977 ; akap-1 C56G2.1b ; CE30637 ; WBGene00016977 ; akap-1 |
Phylogenomic databases
eggNOGi | KOG2279, Eukaryota |
GeneTreei | ENSGT00390000001360 |
HOGENOMi | CLU_330699_0_0_1 |
InParanoidi | Q09285 |
OMAi | WIENEAV |
OrthoDBi | 378332at2759 |
Enzyme and pathway databases
Reactomei | R-CEL-983231, Factors involved in megakaryocyte development and platelet production |
Miscellaneous databases
PROi | PR:Q09285 |
Gene expression databases
Bgeei | WBGene00016977, Expressed in material anatomical entity and 6 other tissues |
ExpressionAtlasi | Q09285, baseline and differential |
Family and domain databases
CDDi | cd04508, TUDOR, 1 hit |
Gene3Di | 2.40.50.90, 1 hit 3.30.1370.10, 1 hit |
InterProi | View protein in InterPro IPR033104, Akap1 IPR004087, KH_dom IPR004088, KH_dom_type_1 IPR036612, KH_dom_type_1_sf IPR035437, SNase_OB-fold_sf IPR002999, Tudor |
PANTHERi | PTHR22948:SF48, PTHR22948:SF48, 1 hit |
Pfami | View protein in Pfam PF00013, KH_1, 1 hit PF00567, TUDOR, 1 hit |
SMARTi | View protein in SMART SM00322, KH, 1 hit SM00333, TUDOR, 1 hit |
SUPFAMi | SSF54791, SSF54791, 1 hit |
PROSITEi | View protein in PROSITE PS50084, KH_TYPE_1, 1 hit PS50304, TUDOR, 1 hit |
MobiDBi | Search... |
Entry informationi
Entry namei | AKAP1_CAEEL | |
Accessioni | Q09285Primary (citable) accession number: Q09285 Secondary accession number(s): Q09286 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | November 1, 1997 |
Last sequence update: | November 25, 2002 | |
Last modified: | February 23, 2022 | |
This is version 135 of the entry and version 2 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Caenorhabditis annotation project |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- Caenorhabditis elegans
Caenorhabditis elegans: entries, gene names and cross-references to WormBase